| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408788
Identifier: 41408788
GI number: 41408788
Start: 3025388
End: 3026191
Strand: Reverse
Name: 41408788
Synonym: MAP2690c
Alternate gene names: NA
Gene position: 3026191-3025388 (Counterclockwise)
Preceding gene: 41408789
Following gene: 41408787
Centisome position: 62.66
GC content: 69.28
Gene sequence:
>804_bases ATGACTGCACCAGAGGCTGATCTGTCCGGCTGGTCGGTGGCACCGTTCAGCGGTGGCGGCTACACCCACGACGTCTACCG CAAGGGCGTGGGCCCGGGCGTGGTGCTGATTCCGGAGCTGCCGGGGATTCATCCCGGGGTGCTGGCCCTGGGTAATCATT TGGTGGACAACGGTTTCACGGTTGCGATGCCGTCGCTGTTCGGTGAGCCGGGCAAGCCGGTTTCGCCGGGCTACCTCGTC GCGGGCATGACGAGGGCCTGCGTGGCAAGGGAATTCGCCGCGTTCGCCACCAACAAGCAGCGGCCGGTGTCGTTGTTCCT GCGGGCGTTGGCTCGTGACCTCAACGCGTCGACGCCCGGTGACGGGGTCGGGGTGATCGGCCAATGCTTCACCGGCGGTT TCGCGTTGGCCGCCGCGGTCGACGAGAGCGTGCTGGCACCGGCGCTGTCGCAGCCGTCGGTGCCCTTCCCGCTGGGCGCG ACGCGGCGCCGCGACCCCGGCGTGAGCGAGGCCGAGCTGGCCACCGTGGCCGACCGGTGCGCCAATGAGGGCTTGTGCGC CATGGGTTTACGGTTCAGCGAGGACTGGACGTCGCCGCGTGAGCGGTTCACCGCACTCAAGCAGCGGCTCGGCGACGCCT TCGAGGTGATCGAGATCGACTCGCGCCCGGGCAACGAACACGGATTCGGCAAGACGGCGCACTCGGTGCTCACCCTGGAG GTCCGCGAAGTCGACGGCCACCCCGCCTACGAGGCCCGCAAGCGGGTGGTCGAATTCCTCACCCAGCGGCTGGGCGCGCG CTAG
Upstream 100 bases:
>100_bases ATCGCGATCACCGGCGCCGGAAGCGCCGAGCAGTTTCGTACGCTGGCCTCGGCGACCCAGTCGCAACCGCCGTTGCCCGT GCGCTGACGAAAGGCCGAGC
Downstream 100 bases:
>100_bases GCGAACTGCCTCGGGCCGCGCGGCTCATCGACCATAATGAGGCGACGCTGTTTTCAGTTTCTTCCAGGAGGTTTTGTGCG CATGGCGGTCGATGACCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Dienelactone Hydrolase Family Protein; Dienelactone Hydrolase Protein; Esterase Lipase Family Protein
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTAPEADLSGWSVAPFSGGGYTHDVYRKGVGPGVVLIPELPGIHPGVLALGNHLVDNGFTVAMPSLFGEPGKPVSPGYLV AGMTRACVAREFAAFATNKQRPVSLFLRALARDLNASTPGDGVGVIGQCFTGGFALAAAVDESVLAPALSQPSVPFPLGA TRRRDPGVSEAELATVADRCANEGLCAMGLRFSEDWTSPRERFTALKQRLGDAFEVIEIDSRPGNEHGFGKTAHSVLTLE VREVDGHPAYEARKRVVEFLTQRLGAR
Sequences:
>Translated_267_residues MTAPEADLSGWSVAPFSGGGYTHDVYRKGVGPGVVLIPELPGIHPGVLALGNHLVDNGFTVAMPSLFGEPGKPVSPGYLV AGMTRACVAREFAAFATNKQRPVSLFLRALARDLNASTPGDGVGVIGQCFTGGFALAAAVDESVLAPALSQPSVPFPLGA TRRRDPGVSEAELATVADRCANEGLCAMGLRFSEDWTSPRERFTALKQRLGDAFEVIEIDSRPGNEHGFGKTAHSVLTLE VREVDGHPAYEARKRVVEFLTQRLGAR >Mature_266_residues TAPEADLSGWSVAPFSGGGYTHDVYRKGVGPGVVLIPELPGIHPGVLALGNHLVDNGFTVAMPSLFGEPGKPVSPGYLVA GMTRACVAREFAAFATNKQRPVSLFLRALARDLNASTPGDGVGVIGQCFTGGFALAAAVDESVLAPALSQPSVPFPLGAT RRRDPGVSEAELATVADRCANEGLCAMGLRFSEDWTSPRERFTALKQRLGDAFEVIEIDSRPGNEHGFGKTAHSVLTLEV REVDGHPAYEARKRVVEFLTQRLGAR
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28238; Mature: 28107
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPEADLSGWSVAPFSGGGYTHDVYRKGVGPGVVLIPELPGIHPGVLALGNHLVDNGFT CCCCCCCCCCCEECCCCCCCCCHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCE VAMPSLFGEPGKPVSPGYLVAGMTRACVAREFAAFATNKQRPVSLFLRALARDLNASTPG EEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC DGVGVIGQCFTGGFALAAAVDESVLAPALSQPSVPFPLGATRRRDPGVSEAELATVADRC CCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH ANEGLCAMGLRFSEDWTSPRERFTALKQRLGDAFEVIEIDSRPGNEHGFGKTAHSVLTLE CCCCEEEECCEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHEEEEEE VREVDGHPAYEARKRVVEFLTQRLGAR EEECCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TAPEADLSGWSVAPFSGGGYTHDVYRKGVGPGVVLIPELPGIHPGVLALGNHLVDNGFT CCCCCCCCCCEECCCCCCCCCHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCE VAMPSLFGEPGKPVSPGYLVAGMTRACVAREFAAFATNKQRPVSLFLRALARDLNASTPG EEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC DGVGVIGQCFTGGFALAAAVDESVLAPALSQPSVPFPLGATRRRDPGVSEAELATVADRC CCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH ANEGLCAMGLRFSEDWTSPRERFTALKQRLGDAFEVIEIDSRPGNEHGFGKTAHSVLTLE CCCCEEEECCEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHEEEEEE VREVDGHPAYEARKRVVEFLTQRLGAR EEECCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA