Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408776

Identifier: 41408776

GI number: 41408776

Start: 3014253

End: 3014528

Strand: Reverse

Name: 41408776

Synonym: MAP2678c

Alternate gene names: NA

Gene position: 3014528-3014253 (Counterclockwise)

Preceding gene: 41408777

Following gene: 41408775

Centisome position: 62.42

GC content: 73.55

Gene sequence:

>276_bases
ATGGCTCCGTTCATCGCCGCCGCCGTGGAGATCTCCGATCCGCAGCATCCCGCGCGCGTGCGGGCCCGCGAGTACAAGAC
CTCCGTCGCCGCCCGCCTGAGCGAGACCGCCCGGGAGGCCGGCGCCGCCGATCCAGAACTCCTCGCTGAGCAGCTGGCGC
TGTTGCTCGATGGCGCCTCGGTTCGGACCAGGGCCTTGGGCACCGACGCCTTCCGGACGGCTGCCGGGATCGCGGCCGCC
CTGGTCGAGCGCGCCATACCCCCGACGGCACGGTGA

Upstream 100 bases:

>100_bases
ACGTCGCGCCCGATCCCCGTCGTCGTCCTGACGCCGAAAAGCTAGCGCACAGCAACATTCGGTACCCGATGCGCCCGGCG
AAGCGGAGGCTTCACGTCAG

Downstream 100 bases:

>100_bases
ATCTCGCGCCTGCCGGCCCGACAAAACGGCCGCTCGGTTGTCAGAGGCAGCGCCTAATGTGCTTGGGCGACACCACATCC
ACCCCTTCGAGGAGCACCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MAPFIAAAVEISDPQHPARVRAREYKTSVAARLSETAREAGAADPELLAEQLALLLDGASVRTRALGTDAFRTAAGIAAA
LVERAIPPTAR

Sequences:

>Translated_91_residues
MAPFIAAAVEISDPQHPARVRAREYKTSVAARLSETAREAGAADPELLAEQLALLLDGASVRTRALGTDAFRTAAGIAAA
LVERAIPPTAR
>Mature_90_residues
APFIAAAVEISDPQHPARVRAREYKTSVAARLSETAREAGAADPELLAEQLALLLDGASVRTRALGTDAFRTAAGIAAAL
VERAIPPTAR

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9493; Mature: 9362

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPFIAAAVEISDPQHPARVRAREYKTSVAARLSETAREAGAADPELLAEQLALLLDGAS
CCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
VRTRALGTDAFRTAAGIAAALVERAIPPTAR
HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
APFIAAAVEISDPQHPARVRAREYKTSVAARLSETAREAGAADPELLAEQLALLLDGAS
CCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
VRTRALGTDAFRTAAGIAAALVERAIPPTAR
HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA