| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is zwf
Identifier: 41408769
GI number: 41408769
Start: 3008144
End: 3009553
Strand: Reverse
Name: zwf
Synonym: MAP2671c
Alternate gene names: 41408769
Gene position: 3009553-3008144 (Counterclockwise)
Preceding gene: 41408772
Following gene: 41408768
Centisome position: 62.31
GC content: 66.95
Gene sequence:
>1410_bases TTGGCCGACGATGACAGCCATCCATCCGACCTGCTGGTGATCTTCGGAATCACCGGGGACTTGGCGCGCAAGATGACGTT CCGCGCGCTCTACCGGCTGGAGCGCCGCGAGGAGCTCGAGCACCCGATCATCGGCGTGGCCAGCGACGACATCACCCTCG ACCAGCTGCTGGACCGCGCCCGGGAGGCGATCAAGGCCACCGGTGAGACGTTCGACGACGCGGTGTTCGACCGCTTGGCG GGCCGGCTGTCCTACCTGTCGGGCGACGTCACCGACGCCGGGCTCTACAGCGAGCTCGCCAAGAAGATCGGTGGCGATTC GCGTCCGCTGTACTACCTGGAGATGCCGCCGTCGTTGTTCGCGCCGATCGTGGAGAACCTGGCCAAGGCCGACCTACTGG AACGCGCCAGGGTGGCGGTGGAAAAGCCGTTCGGCCACGACCTGGAATCTGCGCGCGACCTCAACGCCCGGCTGCGCGCG GTGCTCGACGAAGACCAAATCCTGCGCGTAGACCACTTTTTGGGCAAACAGCCGGTCGAAGAACTGCAATACCTGCGGTT CGCCAACAACGCCCTGGCCAAGCTGTGGGACCGCGACAGCATCTCCGAAATCCACATCACCATGGCCGAGGACTTCGGCA TCGAGGACCGCGGCAAGTTCTATGACGCCGTGGGGGCGGTGCGCGACGTCGTGCAAAACCATCTGCTGCAGGTGCTCGCG CTGGTCGCCATGGAACCCCCGGTGGGGGCGGGCGCCGACGACCTCAACGACAAGAAGGCCGAGGTGTTCCGGGCCATGCC GTCGCTGGACCCGGAGCACTGCGTGCGTGGCCAGTATCGCGGCTACACCGAAGTCCCCGGTGTGGCAAAGGATTCCACCA CCGAGACCTACGTCGCGCTGAGGGCCGAGATCGACAACTGGCGCTGGGCCGGGGTGCCGATCTTCCTGCGCGCCGGCAAG GCGTTGCCGCACAAGGTCACCGAGGTCCGGATGTTCCTGCATCACGTGCCCGGCTTCTCCTTCCTGCCCAACCGCCGCCC GCCCGAGCCCAACCAGATCGTGCTGCGCATCGACCCCGATCCCGGGATGCGCCTGCAGCTGTCCGCTCAGGTCGGCGACT CGTGGCACGACGTGCACCTGGACTCCTCGTTCGCGGTGGACCTCGGCGAACCGGTGCGGCCCTACGAACGGCTGCTCTAC GCCGCGTTCAACGGCGACCGCCAGCTGTTTGCCCGCGAGGACGCCATCGAAGAGACCTGGCGGATCGTGCAGCCGGTGCT GGACAAGCCGAGCCGCATCCACCAATACGAGCAAGGCTCCTGGGGACCCGAGGCCGCGCAGGCGCTGGTGCACGGTCGCC ACGCCTGGCAGCAACCGTGGCTGCCGCAGAGCACGTCCACGAAACGATAA
Upstream 100 bases:
>100_bases GGGCTGGCGCCCCTGCCGGGCTGTGTCTAGTGTTGAGTCCGCCGGCCGCGGGTAGTGAGTCTCAAGGGAGCCGATCGGGT GACTTTCGGGAGGAGCGGTC
Downstream 100 bases:
>100_bases GGAGGCTCGAGACACGATGCAGCTGGGGATGATCGGCCTGGGCCGGATGGGTGCCAACATCGTCCGACGGGTGGTCAAGG GCGGACACGAATGCGTTGTC
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MADDDSHPSDLLVIFGITGDLARKMTFRALYRLERREELEHPIIGVASDDITLDQLLDRAREAIKATGETFDDAVFDRLA GRLSYLSGDVTDAGLYSELAKKIGGDSRPLYYLEMPPSLFAPIVENLAKADLLERARVAVEKPFGHDLESARDLNARLRA VLDEDQILRVDHFLGKQPVEELQYLRFANNALAKLWDRDSISEIHITMAEDFGIEDRGKFYDAVGAVRDVVQNHLLQVLA LVAMEPPVGAGADDLNDKKAEVFRAMPSLDPEHCVRGQYRGYTEVPGVAKDSTTETYVALRAEIDNWRWAGVPIFLRAGK ALPHKVTEVRMFLHHVPGFSFLPNRRPPEPNQIVLRIDPDPGMRLQLSAQVGDSWHDVHLDSSFAVDLGEPVRPYERLLY AAFNGDRQLFAREDAIEETWRIVQPVLDKPSRIHQYEQGSWGPEAAQALVHGRHAWQQPWLPQSTSTKR
Sequences:
>Translated_469_residues MADDDSHPSDLLVIFGITGDLARKMTFRALYRLERREELEHPIIGVASDDITLDQLLDRAREAIKATGETFDDAVFDRLA GRLSYLSGDVTDAGLYSELAKKIGGDSRPLYYLEMPPSLFAPIVENLAKADLLERARVAVEKPFGHDLESARDLNARLRA VLDEDQILRVDHFLGKQPVEELQYLRFANNALAKLWDRDSISEIHITMAEDFGIEDRGKFYDAVGAVRDVVQNHLLQVLA LVAMEPPVGAGADDLNDKKAEVFRAMPSLDPEHCVRGQYRGYTEVPGVAKDSTTETYVALRAEIDNWRWAGVPIFLRAGK ALPHKVTEVRMFLHHVPGFSFLPNRRPPEPNQIVLRIDPDPGMRLQLSAQVGDSWHDVHLDSSFAVDLGEPVRPYERLLY AAFNGDRQLFAREDAIEETWRIVQPVLDKPSRIHQYEQGSWGPEAAQALVHGRHAWQQPWLPQSTSTKR >Mature_468_residues ADDDSHPSDLLVIFGITGDLARKMTFRALYRLERREELEHPIIGVASDDITLDQLLDRAREAIKATGETFDDAVFDRLAG RLSYLSGDVTDAGLYSELAKKIGGDSRPLYYLEMPPSLFAPIVENLAKADLLERARVAVEKPFGHDLESARDLNARLRAV LDEDQILRVDHFLGKQPVEELQYLRFANNALAKLWDRDSISEIHITMAEDFGIEDRGKFYDAVGAVRDVVQNHLLQVLAL VAMEPPVGAGADDLNDKKAEVFRAMPSLDPEHCVRGQYRGYTEVPGVAKDSTTETYVALRAEIDNWRWAGVPIFLRAGKA LPHKVTEVRMFLHHVPGFSFLPNRRPPEPNQIVLRIDPDPGMRLQLSAQVGDSWHDVHLDSSFAVDLGEPVRPYERLLYA AFNGDRQLFAREDAIEETWRIVQPVLDKPSRIHQYEQGSWGPEAAQALVHGRHAWQQPWLPQSTSTKR
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI108773793, Length=506, Percent_Identity=33.7944664031621, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI109389365, Length=506, Percent_Identity=33.7944664031621, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI52145310, Length=349, Percent_Identity=31.8051575931232, Blast_Score=150, Evalue=2e-36, Organism=Escherichia coli, GI1788158, Length=470, Percent_Identity=37.0212765957447, Blast_Score=298, Evalue=5e-82, Organism=Caenorhabditis elegans, GI17538218, Length=493, Percent_Identity=34.8884381338742, Blast_Score=270, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6324088, Length=485, Percent_Identity=34.020618556701, Blast_Score=253, Evalue=4e-68, Organism=Drosophila melanogaster, GI24643350, Length=465, Percent_Identity=33.5483870967742, Blast_Score=259, Evalue=2e-69, Organism=Drosophila melanogaster, GI24643352, Length=465, Percent_Identity=33.5483870967742, Blast_Score=259, Evalue=3e-69, Organism=Drosophila melanogaster, GI221513548, Length=468, Percent_Identity=29.4871794871795, Blast_Score=164, Evalue=1e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 52934; Mature: 52803
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDDSHPSDLLVIFGITGDLARKMTFRALYRLERREELEHPIIGVASDDITLDQLLDRA CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH REAIKATGETFDDAVFDRLAGRLSYLSGDVTDAGLYSELAKKIGGDSRPLYYLEMPPSLF HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHH APIVENLAKADLLERARVAVEKPFGHDLESARDLNARLRAVLDEDQILRVDHFLGKQPVE HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHCCCHHH ELQYLRFANNALAKLWDRDSISEIHITMAEDFGIEDRGKFYDAVGAVRDVVQNHLLQVLA HHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LVAMEPPVGAGADDLNDKKAEVFRAMPSLDPEHCVRGQYRGYTEVPGVAKDSTTETYVAL HHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE RAEIDNWRWAGVPIFLRAGKALPHKVTEVRMFLHHVPGFSFLPNRRPPEPNQIVLRIDPD EEECCCCEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCC PGMRLQLSAQVGDSWHDVHLDSSFAVDLGEPVRPYERLLYAAFNGDRQLFAREDAIEETW CCCEEEEEECCCCCEEEEECCCCEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH RIVQPVLDKPSRIHQYEQGSWGPEAAQALVHGRHAWQQPWLPQSTSTKR HHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure ADDDSHPSDLLVIFGITGDLARKMTFRALYRLERREELEHPIIGVASDDITLDQLLDRA CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH REAIKATGETFDDAVFDRLAGRLSYLSGDVTDAGLYSELAKKIGGDSRPLYYLEMPPSLF HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHH APIVENLAKADLLERARVAVEKPFGHDLESARDLNARLRAVLDEDQILRVDHFLGKQPVE HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHCCCHHH ELQYLRFANNALAKLWDRDSISEIHITMAEDFGIEDRGKFYDAVGAVRDVVQNHLLQVLA HHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LVAMEPPVGAGADDLNDKKAEVFRAMPSLDPEHCVRGQYRGYTEVPGVAKDSTTETYVAL HHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE RAEIDNWRWAGVPIFLRAGKALPHKVTEVRMFLHHVPGFSFLPNRRPPEPNQIVLRIDPD EEECCCCEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCC PGMRLQLSAQVGDSWHDVHLDSSFAVDLGEPVRPYERLLYAAFNGDRQLFAREDAIEETW CCCEEEEEECCCCCEEEEECCCCEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH RIVQPVLDKPSRIHQYEQGSWGPEAAQALVHGRHAWQQPWLPQSTSTKR HHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]