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The map label for this gene is yngJ [H]

Identifier: 41408754

GI number: 41408754

Start: 2991020

End: 2992120

Strand: Direct

Name: yngJ [H]

Synonym: MAP2656

Alternate gene names: 41408754

Gene position: 2991020-2992120 (Clockwise)

Preceding gene: 41408753

Following gene: 41408755

Centisome position: 61.93

GC content: 71.93

Gene sequence:

>1101_bases
ATGAACCTCGAACTCACCGACGAACAGGTGGCGCTGCGCGACACCACGCGGCGCTTCCTCGCCGAGAAGGCCCCGATCGC
ACACCACGTGCGCCGGCTGCTCGACGACCCGACCGGGATCGAGCCGGCGGTATGGCGCGGCCTGGCCGACCTGGGCTGCA
CCGGGCTGCTGGTGCCCGAACAACACGGCGGGGCGGGCATGACGATGGTCGAGGCCGGGATCGTGGCCGAAGAGCTTGGC
GCCGCGCTGTATCCGGGTCCGTGGTTGTCGACGGCGGTGGCCGCCCCGCGGGCACTGATCCGGCTGTGCGCCGGCGGCGA
CACCGCCGCCGGGCTGCTGCGCGGCATCGCCGACGGGACCACCCACGTCGCCGTCTGCTTCCTGGACACCCCGCCCATGG
CCGCCACCCGAGAGGGCGAGACCACGGCGCTGCACGGGCAGGCCCGCGCCGTGCCCGATGCCGCGGCCGCCGACGTCCTG
CTGGCTCTGGCCGAAGATGCCGGGGACACAGCGCTTTTCGCGGTGAACACCGGATCGGCCGGGGTTGCGGTCACGCCCGA
ACACCACATCGACCCGACCCACAAACAGTCGCGGGTCACCTTCGACGCGGCCCCCGCGCGGCGGCTGGCGACGGCGTCGG
CGGACGACGTGGCGGCGGTGGTCGACGACGTGCTGATCGCCGCCTGCGCCGACGCGCTCGGCGCCGCCCGCGCCGTCATG
GACCTCGCCGTCGAATATGCCAAGACCCGAACGCAATTCGGTCAGCCGATCGGGTCGTTCCAGGCCGTCCAGCATCTGTG
CGTGGACATGTACGAGACCGTCGAGTTGGCCCGCAGCGGGGTGATCCACGCCCTGTGGGTTAGCGACGCGCCCGACGGCG
ATGAGCGGCATCTGGCCGCGCTGCGGGCGAAGGCGTTCGCCGGGCGACTGGCCGGCGTGGCCGACACCGCTATCCAGGTC
TTCGGCGGCATCGGCTACACCTGGGAGCACGACGCCCACCTCTATCTCAAGCGGTTGCTGGGCTACAGCGCGTTTCTCGG
CGGACCCGACCGCTACCTCACCGAAGTCGGTGCGCGCCTTGCCAAGAGAGGCAGTCCGTGA

Upstream 100 bases:

>100_bases
CGAACTACCGGCTGACGTCGCGCTCGCTGACCATCGCGGGCGGCACCACGCAGATCAACAAGAACATCACCGCCCAACGG
GTGTTGGGGTTGCCGCGCAA

Downstream 100 bases:

>100_bases
TGAATGTCGAGTACCTGCTCACCGCCACGCCGTCGGCGCGCAAGTCGCTGGACCTGGACGCCCCGGTCGACCCCGGCGAC
ATCCGCGAGTGCCTGCGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MNLELTDEQVALRDTTRRFLAEKAPIAHHVRRLLDDPTGIEPAVWRGLADLGCTGLLVPEQHGGAGMTMVEAGIVAEELG
AALYPGPWLSTAVAAPRALIRLCAGGDTAAGLLRGIADGTTHVAVCFLDTPPMAATREGETTALHGQARAVPDAAAADVL
LALAEDAGDTALFAVNTGSAGVAVTPEHHIDPTHKQSRVTFDAAPARRLATASADDVAAVVDDVLIAACADALGAARAVM
DLAVEYAKTRTQFGQPIGSFQAVQHLCVDMYETVELARSGVIHALWVSDAPDGDERHLAALRAKAFAGRLAGVADTAIQV
FGGIGYTWEHDAHLYLKRLLGYSAFLGGPDRYLTEVGARLAKRGSP

Sequences:

>Translated_366_residues
MNLELTDEQVALRDTTRRFLAEKAPIAHHVRRLLDDPTGIEPAVWRGLADLGCTGLLVPEQHGGAGMTMVEAGIVAEELG
AALYPGPWLSTAVAAPRALIRLCAGGDTAAGLLRGIADGTTHVAVCFLDTPPMAATREGETTALHGQARAVPDAAAADVL
LALAEDAGDTALFAVNTGSAGVAVTPEHHIDPTHKQSRVTFDAAPARRLATASADDVAAVVDDVLIAACADALGAARAVM
DLAVEYAKTRTQFGQPIGSFQAVQHLCVDMYETVELARSGVIHALWVSDAPDGDERHLAALRAKAFAGRLAGVADTAIQV
FGGIGYTWEHDAHLYLKRLLGYSAFLGGPDRYLTEVGARLAKRGSP
>Mature_366_residues
MNLELTDEQVALRDTTRRFLAEKAPIAHHVRRLLDDPTGIEPAVWRGLADLGCTGLLVPEQHGGAGMTMVEAGIVAEELG
AALYPGPWLSTAVAAPRALIRLCAGGDTAAGLLRGIADGTTHVAVCFLDTPPMAATREGETTALHGQARAVPDAAAADVL
LALAEDAGDTALFAVNTGSAGVAVTPEHHIDPTHKQSRVTFDAAPARRLATASADDVAAVVDDVLIAACADALGAARAVM
DLAVEYAKTRTQFGQPIGSFQAVQHLCVDMYETVELARSGVIHALWVSDAPDGDERHLAALRAKAFAGRLAGVADTAIQV
FGGIGYTWEHDAHLYLKRLLGYSAFLGGPDRYLTEVGARLAKRGSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17570075, Length=370, Percent_Identity=25.9459459459459, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21355753, Length=370, Percent_Identity=24.5945945945946, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24660351, Length=376, Percent_Identity=23.6702127659574, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 38257; Mature: 38257

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLELTDEQVALRDTTRRFLAEKAPIAHHVRRLLDDPTGIEPAVWRGLADLGCTGLLVPE
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEC
QHGGAGMTMVEAGIVAEELGAALYPGPWLSTAVAAPRALIRLCAGGDTAAGLLRGIADGT
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
THVAVCFLDTPPMAATREGETTALHGQARAVPDAAAADVLLALAEDAGDTALFAVNTGSA
CEEEEEEECCCCCCCCCCCCCEEECCCHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCC
GVAVTPEHHIDPTHKQSRVTFDAAPARRLATASADDVAAVVDDVLIAACADALGAARAVM
CEEECCCCCCCCCCCCCEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DLAVEYAKTRTQFGQPIGSFQAVQHLCVDMYETVELARSGVIHALWVSDAPDGDERHLAA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHH
LRAKAFAGRLAGVADTAIQVFGGIGYTWEHDAHLYLKRLLGYSAFLGGPDRYLTEVGARL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AKRGSP
HHCCCC
>Mature Secondary Structure
MNLELTDEQVALRDTTRRFLAEKAPIAHHVRRLLDDPTGIEPAVWRGLADLGCTGLLVPE
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEC
QHGGAGMTMVEAGIVAEELGAALYPGPWLSTAVAAPRALIRLCAGGDTAAGLLRGIADGT
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
THVAVCFLDTPPMAATREGETTALHGQARAVPDAAAADVLLALAEDAGDTALFAVNTGSA
CEEEEEEECCCCCCCCCCCCCEEECCCHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCC
GVAVTPEHHIDPTHKQSRVTFDAAPARRLATASADDVAAVVDDVLIAACADALGAARAVM
CEEECCCCCCCCCCCCCEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DLAVEYAKTRTQFGQPIGSFQAVQHLCVDMYETVELARSGVIHALWVSDAPDGDERHLAA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHH
LRAKAFAGRLAGVADTAIQVFGGIGYTWEHDAHLYLKRLLGYSAFLGGPDRYLTEVGARL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AKRGSP
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]