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The map label for this gene is 41408726

Identifier: 41408726

GI number: 41408726

Start: 2963980

End: 2964555

Strand: Reverse

Name: 41408726

Synonym: MAP2628c

Alternate gene names: NA

Gene position: 2964555-2963980 (Counterclockwise)

Preceding gene: 41408727

Following gene: 41408725

Centisome position: 61.38

GC content: 69.27

Gene sequence:

>576_bases
GTGCCGAAACTGCAGCTTGTCCAAGAGCCGGCCGCCGACGCCCTGCTGGACGAGAACCCGTTCGCGTTACTGGTCGGCAT
GCTGCTCGATCAGCAGGTGCCGATCGAGACCGCCTTCGCCGGCCCCAAGAAGATCGCCGACCGGATGGGCGGGCTGGACG
CCGCGACGATCGCCGACTACGACCCGGACAAGTTCGCCGCACTGTGTTCGGAAAGGCCTGCCATACACCGGTTTCCGGGG
TCGATGGCCAAGCGCATCCAGGCCCTGGCGCAGCTGCTGGTGGACCGCTACGGCGGCGATGCCGCCGCGCTGTGGACCGC
CGGTGAGCCCGACGGCAAGGAGCTGCTGCGCCGGCTCAAGGGACTGCCCGGCTTCGGCGAGCAGAAGGCGCGGATCTTCC
TGGCGCTGCTGGGCAAGCAGTACGGGGTGACGCCGCCGGGCTGGCGGGAAGCCGCCGGCGAGTTCGGCAAAGCCGGCACC
TACCTGTCTGTCGCCGACATCGTCGACGCCCGGTCGCTCGGGCAGGTGCGGTCCTACAAGAAGCAGATGAAGGCGGCGGC
CAAGGCGGCCAAGTAG

Upstream 100 bases:

>100_bases
GAGACGGCCGGCGCGGTGGGGATTCCGGCGCGGCGAGCGTGCGGTCCGCCGCGTGAACGCCCTGGACGCGGGGCCCGGGG
CGCGGTTCTAGACTGTCTGC

Downstream 100 bases:

>100_bases
TGAGTGCACGGAAGGGAAGGGCGACAACGTGAAGACACACATAACGTGTCCGTGCGGCGAAGCCATCGTCGGCAAGGACG
AGGACGAGCTGGTGGAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: HhH-GPD Protein; HhH-GPD; HhH-GPD Family Base Excision DNA Repair Protein; Hhh-Gpd Family DNA Repair Protein; HhH-GPD Superfamily Base Excision DNA Repair Protein; Base Excision DNA Repair Protein HhH-GPD Family Protein

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MPKLQLVQEPAADALLDENPFALLVGMLLDQQVPIETAFAGPKKIADRMGGLDAATIADYDPDKFAALCSERPAIHRFPG
SMAKRIQALAQLLVDRYGGDAAALWTAGEPDGKELLRRLKGLPGFGEQKARIFLALLGKQYGVTPPGWREAAGEFGKAGT
YLSVADIVDARSLGQVRSYKKQMKAAAKAAK

Sequences:

>Translated_191_residues
MPKLQLVQEPAADALLDENPFALLVGMLLDQQVPIETAFAGPKKIADRMGGLDAATIADYDPDKFAALCSERPAIHRFPG
SMAKRIQALAQLLVDRYGGDAAALWTAGEPDGKELLRRLKGLPGFGEQKARIFLALLGKQYGVTPPGWREAAGEFGKAGT
YLSVADIVDARSLGQVRSYKKQMKAAAKAAK
>Mature_190_residues
PKLQLVQEPAADALLDENPFALLVGMLLDQQVPIETAFAGPKKIADRMGGLDAATIADYDPDKFAALCSERPAIHRFPGS
MAKRIQALAQLLVDRYGGDAAALWTAGEPDGKELLRRLKGLPGFGEQKARIFLALLGKQYGVTPPGWREAAGEFGKAGTY
LSVADIVDARSLGQVRSYKKQMKAAAKAAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20480; Mature: 20349

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLQLVQEPAADALLDENPFALLVGMLLDQQVPIETAFAGPKKIADRMGGLDAATIADY
CCCCHHHHCCHHHHHHCCCHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHCCCCCHHHCCC
DPDKFAALCSERPAIHRFPGSMAKRIQALAQLLVDRYGGDAAALWTAGEPDGKELLRRLK
CHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH
GLPGFGEQKARIFLALLGKQYGVTPPGWREAAGEFGKAGTYLSVADIVDARSLGQVRSYK
CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
KQMKAAAKAAK
HHHHHHHHCCC
>Mature Secondary Structure 
PKLQLVQEPAADALLDENPFALLVGMLLDQQVPIETAFAGPKKIADRMGGLDAATIADY
CCCHHHHCCHHHHHHCCCHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHCCCCCHHHCCC
DPDKFAALCSERPAIHRFPGSMAKRIQALAQLLVDRYGGDAAALWTAGEPDGKELLRRLK
CHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH
GLPGFGEQKARIFLALLGKQYGVTPPGWREAAGEFGKAGTYLSVADIVDARSLGQVRSYK
CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
KQMKAAAKAAK
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA