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The map label for this gene is lpqW

Identifier: 41408713

GI number: 41408713

Start: 2947497

End: 2949440

Strand: Reverse

Name: lpqW

Synonym: MAP2615c

Alternate gene names: 41408713

Gene position: 2949440-2947497 (Counterclockwise)

Preceding gene: 41408714

Following gene: 41408711

Centisome position: 61.07

GC content: 71.4

Gene sequence:

>1944_bases
GTGGTCGGACGGGCTGCTGTGCGGCTGCTCGATACCCTGATCAGCGTGCCGAGACGAGTGCGCCGGGTGTTCATGGTGCT
CGGCGGCCTGGTTTCGGTGGTCGGCCTGGTGCTTTCGGCGTGCACGGTCAACCCGCCGCCGGCCCCGCAGAGCACCGACA
CGCCGCACAATTCGGTGCCGCCGCCGCCCCGGGTCAGCCAGATCATCATGGGCATCGACTCGATCGGGGCGGGCTTCAAC
CCGCACCTGCTCTCCGACCTGTCCCCGGTCAACGCGGCGATCAGCGCGCTGGTGCTGCCCAGCGCGTTCCGGCCGGTGCC
CGATCCCAACACGCCCACCGGCTCGCGCTGGGAGATGGACCCGACCCTGTTGGTGTCCGCGGAGGTGACGAGCCAGAACC
CGTTCACGGTGACCTACAAGATCCGGCCCGAGGCGCAGTGGACCGACAACGCCCCGATCGCCGCCGACGACTTCTGGTAC
CTGTGGCACCAGATGGTCAGCCAGCCCGGGGTCGTCGACCCGGCCGGCTACGACCTGATCACCGGCGTGCAGTCGCTGGA
AGGCGGCAAGCAGGCGGTGGTCACCTTCTCCGAGCCCTACCCGGCGTGGAAAGAGTTGTTCAACAACATCCTTCCGGCGC
ACATCGTCAAGGACGTGCCCGGGGGTTTCGCCGCCGGTCTGGCCCGGGCGCTTCCGGTCACCGGCGGGCAGTTCCGGGTG
GAGAGCATCGACCCGCAGCGCGACGAGATCCTGATCGCCCGCAACGACCGCTATTGGGGGCCCCCGGCCAAGCCCGGGCT
CATCCTGTTCCGGCGCGCGGGAGCGCCTGCGGCCCTTGCCGATTCGGTGCGCAACGGCGACACCCAGGTGGCGCAGGTGC
ACGGCGGCTCGGCGGCGTTCGCGCAGCTGTCCGCCATCCCCGACGTGCGGACCGCCCGGATCGTCACACCGCGGGTCATG
CAGCTCACGCTGCGCGCCACCCAGCCCAAACTTGCCGACACGCAAGTGCGTAAGGCGATCCTGGGATTGCTCGACGTCGA
CCTGCTCGCGGCGGTGGGCGCGGGCAGCGACAACACCGTCACCCTGGACCAGGCCCAGATCCGGGCGCCCAGCGACCCCG
GCTACGAGCCGACCGCCCCGCCGGCGATGACGACACCGGCGGCGCTGGCGTTGCTGGAAGGCGCCGGATACAAGGTGGAG
CCCAACACCTCGGCCTCACCGGCGACGCCCGCCCCGGGTCCACCCAACACCGGGCCGCCCGAGGTCATCCGGGGCCGGAT
CAGCAAGGACGGCCAACAGCTCTCGCTGGCCATCGGGGTGGCGGCCAACGACCCGACCGCGGTGGCGGTGGCCAACACCG
CCGCCGACCAGCTGCGCAACGTCGGCATCGCCGCCACCGTGCTGGCGCTGGACCCGGTCACCCTCTACCGCGACGCGCTG
AACGACAACCGGGTGGACGCGATCGTCGGATGGCATCAGGCGGGCGGCAACCTGGCCACCCGGCTGGCCGCCCGCTACGG
CTGTCCCGCGCTGCAGTCCACCCAGGTGCCGGCCTCCACCGAGCCGACGCCCACGTCGCCCGCCCCGGGCGGGCCCGCCC
CGTCGACCGGACCGGCCACCAGGTCGGCAACCCCCACCTCGACAGCACCGCCGAGCCGGCCCGCCGACCCCAATGCCCTG
GTGCAGGCGCCGTCCAACCTCACCGGCATCTGCGATCGCAGCATCCAGTCCAACATCGACGCCGCCCTCAACGGCACCAA
GAACATCAACGACGTGATCACCGCGGTCGAACCGCGACTGTGGAACATGTCCACGGTGCTGCCGATCCTGCAGGACACCA
CCATCGTGGCGGCCGGCCCGAGCGTGCAGAACGTCAGCCTGTCCGGCGCGGTCCCGGTCGGCATCGTCGGTGACGCCGGC
CAATGGACCAAGACCGGGCCGTAG

Upstream 100 bases:

>100_bases
GAGGTGACTCCGGAGATCGTGCGGGTGCGCAAGGTCGAGCTGGACGCCACCTCGCGGGCGCGCAGCCGGGCCCGCGCCAA
GGCCCGGGGCTGAACCACTG

Downstream 100 bases:

>100_bases
CTAGTCGGCGGCGCGGTCCGAATCCCGCGGCGGGATCACGGTATCGACGATCAGGGCCAGCTCCCGCCGGTTCGGCGGCG
ACCCGTTCAGCAGGAAATGC

Product: LpqW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 647; Mature: 647

Protein sequence:

>647_residues
MVGRAAVRLLDTLISVPRRVRRVFMVLGGLVSVVGLVLSACTVNPPPAPQSTDTPHNSVPPPPRVSQIIMGIDSIGAGFN
PHLLSDLSPVNAAISALVLPSAFRPVPDPNTPTGSRWEMDPTLLVSAEVTSQNPFTVTYKIRPEAQWTDNAPIAADDFWY
LWHQMVSQPGVVDPAGYDLITGVQSLEGGKQAVVTFSEPYPAWKELFNNILPAHIVKDVPGGFAAGLARALPVTGGQFRV
ESIDPQRDEILIARNDRYWGPPAKPGLILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPRVM
QLTLRATQPKLADTQVRKAILGLLDVDLLAAVGAGSDNTVTLDQAQIRAPSDPGYEPTAPPAMTTPAALALLEGAGYKVE
PNTSASPATPAPGPPNTGPPEVIRGRISKDGQQLSLAIGVAANDPTAVAVANTAADQLRNVGIAATVLALDPVTLYRDAL
NDNRVDAIVGWHQAGGNLATRLAARYGCPALQSTQVPASTEPTPTSPAPGGPAPSTGPATRSATPTSTAPPSRPADPNAL
VQAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVAAGPSVQNVSLSGAVPVGIVGDAG
QWTKTGP

Sequences:

>Translated_647_residues
MVGRAAVRLLDTLISVPRRVRRVFMVLGGLVSVVGLVLSACTVNPPPAPQSTDTPHNSVPPPPRVSQIIMGIDSIGAGFN
PHLLSDLSPVNAAISALVLPSAFRPVPDPNTPTGSRWEMDPTLLVSAEVTSQNPFTVTYKIRPEAQWTDNAPIAADDFWY
LWHQMVSQPGVVDPAGYDLITGVQSLEGGKQAVVTFSEPYPAWKELFNNILPAHIVKDVPGGFAAGLARALPVTGGQFRV
ESIDPQRDEILIARNDRYWGPPAKPGLILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPRVM
QLTLRATQPKLADTQVRKAILGLLDVDLLAAVGAGSDNTVTLDQAQIRAPSDPGYEPTAPPAMTTPAALALLEGAGYKVE
PNTSASPATPAPGPPNTGPPEVIRGRISKDGQQLSLAIGVAANDPTAVAVANTAADQLRNVGIAATVLALDPVTLYRDAL
NDNRVDAIVGWHQAGGNLATRLAARYGCPALQSTQVPASTEPTPTSPAPGGPAPSTGPATRSATPTSTAPPSRPADPNAL
VQAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVAAGPSVQNVSLSGAVPVGIVGDAG
QWTKTGP
>Mature_647_residues
MVGRAAVRLLDTLISVPRRVRRVFMVLGGLVSVVGLVLSACTVNPPPAPQSTDTPHNSVPPPPRVSQIIMGIDSIGAGFN
PHLLSDLSPVNAAISALVLPSAFRPVPDPNTPTGSRWEMDPTLLVSAEVTSQNPFTVTYKIRPEAQWTDNAPIAADDFWY
LWHQMVSQPGVVDPAGYDLITGVQSLEGGKQAVVTFSEPYPAWKELFNNILPAHIVKDVPGGFAAGLARALPVTGGQFRV
ESIDPQRDEILIARNDRYWGPPAKPGLILFRRAGAPAALADSVRNGDTQVAQVHGGSAAFAQLSAIPDVRTARIVTPRVM
QLTLRATQPKLADTQVRKAILGLLDVDLLAAVGAGSDNTVTLDQAQIRAPSDPGYEPTAPPAMTTPAALALLEGAGYKVE
PNTSASPATPAPGPPNTGPPEVIRGRISKDGQQLSLAIGVAANDPTAVAVANTAADQLRNVGIAATVLALDPVTLYRDAL
NDNRVDAIVGWHQAGGNLATRLAARYGCPALQSTQVPASTEPTPTSPAPGGPAPSTGPATRSATPTSTAPPSRPADPNAL
VQAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRLWNMSTVLPILQDTTIVAAGPSVQNVSLSGAVPVGIVGDAG
QWTKTGP

Specific function: May directly or indirectly regulate the accessibility of the key branch point intermediate, monoacyl phosphatidylinositol tetramannoside (AcPIM4), to the elongating alpha-1,6 mannosyltransferases which could regulate the lipoarabinomannans (LAMs) biosynth

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 67250; Mature: 67250

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGRAAVRLLDTLISVPRRVRRVFMVLGGLVSVVGLVLSACTVNPPPAPQSTDTPHNSVP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PPPRVSQIIMGIDSIGAGFNPHLLSDLSPVNAAISALVLPSAFRPVPDPNTPTGSRWEMD
CCHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC
PTLLVSAEVTSQNPFTVTYKIRPEAQWTDNAPIAADDFWYLWHQMVSQPGVVDPAGYDLI
CEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHH
TGVQSLEGGKQAVVTFSEPYPAWKELFNNILPAHIVKDVPGGFAAGLARALPVTGGQFRV
HHHHHCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCCCCEEEE
ESIDPQRDEILIARNDRYWGPPAKPGLILFRRAGAPAALADSVRNGDTQVAQVHGGSAAF
ECCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEEECCCCHHH
AQLSAIPDVRTARIVTPRVMQLTLRATQPKLADTQVRKAILGLLDVDLLAAVGAGSDNTV
HHHHCCCCCCCEEECCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
TLDQAQIRAPSDPGYEPTAPPAMTTPAALALLEGAGYKVEPNTSASPATPAPGPPNTGPP
EECHHEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCH
EVIRGRISKDGQQLSLAIGVAANDPTAVAVANTAADQLRNVGIAATVLALDPVTLYRDAL
HHHHHHCCCCCCEEEEEEEEECCCCCEEEEEHHHHHHHHCCCCEEEEEHHCCHHHHHHHC
NDNRVDAIVGWHQAGGNLATRLAARYGCPALQSTQVPASTEPTPTSPAPGGPAPSTGPAT
CCCCEEEEEEEHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RSATPTSTAPPSRPADPNALVQAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRL
CCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCHHHHCCCCCHHHHHHHCCCCC
WNMSTVLPILQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWTKTGP
CCHHHHHHHHCCCEEEEECCCCCEEEECCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MVGRAAVRLLDTLISVPRRVRRVFMVLGGLVSVVGLVLSACTVNPPPAPQSTDTPHNSVP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PPPRVSQIIMGIDSIGAGFNPHLLSDLSPVNAAISALVLPSAFRPVPDPNTPTGSRWEMD
CCHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC
PTLLVSAEVTSQNPFTVTYKIRPEAQWTDNAPIAADDFWYLWHQMVSQPGVVDPAGYDLI
CEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHH
TGVQSLEGGKQAVVTFSEPYPAWKELFNNILPAHIVKDVPGGFAAGLARALPVTGGQFRV
HHHHHCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCCCCEEEE
ESIDPQRDEILIARNDRYWGPPAKPGLILFRRAGAPAALADSVRNGDTQVAQVHGGSAAF
ECCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEEECCCCHHH
AQLSAIPDVRTARIVTPRVMQLTLRATQPKLADTQVRKAILGLLDVDLLAAVGAGSDNTV
HHHHCCCCCCCEEECCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
TLDQAQIRAPSDPGYEPTAPPAMTTPAALALLEGAGYKVEPNTSASPATPAPGPPNTGPP
EECHHEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCH
EVIRGRISKDGQQLSLAIGVAANDPTAVAVANTAADQLRNVGIAATVLALDPVTLYRDAL
HHHHHHCCCCCCEEEEEEEEECCCCCEEEEEHHHHHHHHCCCCEEEEEHHCCHHHHHHHC
NDNRVDAIVGWHQAGGNLATRLAARYGCPALQSTQVPASTEPTPTSPAPGGPAPSTGPAT
CCCCEEEEEEEHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RSATPTSTAPPSRPADPNALVQAPSNLTGICDRSIQSNIDAALNGTKNINDVITAVEPRL
CCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCHHHHCCCCCHHHHHHHCCCCC
WNMSTVLPILQDTTIVAAGPSVQNVSLSGAVPVGIVGDAGQWTKTGP
CCHHHHHHHHCCCEEEEECCCCCEEEECCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]