| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408710
Identifier: 41408710
GI number: 41408710
Start: 2945349
End: 2945837
Strand: Reverse
Name: 41408710
Synonym: MAP2612c
Alternate gene names: NA
Gene position: 2945837-2945349 (Counterclockwise)
Preceding gene: 41408711
Following gene: 41408709
Centisome position: 60.99
GC content: 69.94
Gene sequence:
>489_bases CTGGCAGGACCGGCTCGACAGCCTGCAGTGGGTTATCGGCTCGATACTCTCCAACATCGACAGCGTTCCGACCTGACCGA AACCAAGCCGCGCGTCGCGTCCGGTGAAGACAGCGGCGCGACAGACCCCGCGATTCGTTTCGTTGTCCTGGCGCTGTTGG CGGTCGACGGGGTTCTCTCCGCACTGGCCGGGGCCCTGCTGCTGCCTTTGTATATCGGGACGGTTCCCTTTCCCATCAGC GGATTGATTTCCGGGCTGCTCAACGCGGCGCTGGTGTGGGCCGCCGGGCGCTGGACCCGATCACCGCGGCTGGTCGCGCT GCCGCTGTGGACCTGGCTGCTGACCGTCGCGGTGATCAGCATGGGCGGCCCGGCCGACGACGTCATCCTGGGCGGCCGCG GGGTGATGGCCTACGGCGCCCTGCTGCTGCTGGTGCTCGGGGTGGCGCCGCCGGTCTGGGTGCTGTGGCGGCGCGGCCGC GGCGGCTGA
Upstream 100 bases:
>100_bases CGGGCCTGGAATTCGGCGCCGCCCCCAGGCGGTAGGCTGCCAATCAGGCAGCCACGGAAGGAATTCGCATGGACCCCGAC CTGGACCCTAATCAGCAGCA
Downstream 100 bases:
>100_bases GCCGCCGTGTTCCGGGCCGGGATGTCGCCCGCTTGCCGGTGTGGGCGTGGCGCTACTGTTGACAGTTGCCCATCCGGGAC CCGCCACGGGTGCCACGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MAGPARQPAVGYRLDTLQHRQRSDLTETKPRVASGEDSGATDPAIRFVVLALLAVDGVLSALAGALLLPLYIGTVPFPIS GLISGLLNAALVWAAGRWTRSPRLVALPLWTWLLTVAVISMGGPADDVILGGRGVMAYGALLLLVLGVAPPVWVLWRRGR GG
Sequences:
>Translated_162_residues MAGPARQPAVGYRLDTLQHRQRSDLTETKPRVASGEDSGATDPAIRFVVLALLAVDGVLSALAGALLLPLYIGTVPFPIS GLISGLLNAALVWAAGRWTRSPRLVALPLWTWLLTVAVISMGGPADDVILGGRGVMAYGALLLLVLGVAPPVWVLWRRGR GG >Mature_161_residues AGPARQPAVGYRLDTLQHRQRSDLTETKPRVASGEDSGATDPAIRFVVLALLAVDGVLSALAGALLLPLYIGTVPFPISG LISGLLNAALVWAAGRWTRSPRLVALPLWTWLLTVAVISMGGPADDVILGGRGVMAYGALLLLVLGVAPPVWVLWRRGRG G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17008; Mature: 16877
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGPARQPAVGYRLDTLQHRQRSDLTETKPRVASGEDSGATDPAIRFVVLALLAVDGVLS CCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ALAGALLLPLYIGTVPFPISGLISGLLNAALVWAAGRWTRSPRLVALPLWTWLLTVAVIS HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHH MGGPADDVILGGRGVMAYGALLLLVLGVAPPVWVLWRRGRGG CCCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCC >Mature Secondary Structure AGPARQPAVGYRLDTLQHRQRSDLTETKPRVASGEDSGATDPAIRFVVLALLAVDGVLS CCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ALAGALLLPLYIGTVPFPISGLISGLLNAALVWAAGRWTRSPRLVALPLWTWLLTVAVIS HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHH MGGPADDVILGGRGVMAYGALLLLVLGVAPPVWVLWRRGRGG CCCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA