Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408710

Identifier: 41408710

GI number: 41408710

Start: 2945349

End: 2945837

Strand: Reverse

Name: 41408710

Synonym: MAP2612c

Alternate gene names: NA

Gene position: 2945837-2945349 (Counterclockwise)

Preceding gene: 41408711

Following gene: 41408709

Centisome position: 60.99

GC content: 69.94

Gene sequence:

>489_bases
CTGGCAGGACCGGCTCGACAGCCTGCAGTGGGTTATCGGCTCGATACTCTCCAACATCGACAGCGTTCCGACCTGACCGA
AACCAAGCCGCGCGTCGCGTCCGGTGAAGACAGCGGCGCGACAGACCCCGCGATTCGTTTCGTTGTCCTGGCGCTGTTGG
CGGTCGACGGGGTTCTCTCCGCACTGGCCGGGGCCCTGCTGCTGCCTTTGTATATCGGGACGGTTCCCTTTCCCATCAGC
GGATTGATTTCCGGGCTGCTCAACGCGGCGCTGGTGTGGGCCGCCGGGCGCTGGACCCGATCACCGCGGCTGGTCGCGCT
GCCGCTGTGGACCTGGCTGCTGACCGTCGCGGTGATCAGCATGGGCGGCCCGGCCGACGACGTCATCCTGGGCGGCCGCG
GGGTGATGGCCTACGGCGCCCTGCTGCTGCTGGTGCTCGGGGTGGCGCCGCCGGTCTGGGTGCTGTGGCGGCGCGGCCGC
GGCGGCTGA

Upstream 100 bases:

>100_bases
CGGGCCTGGAATTCGGCGCCGCCCCCAGGCGGTAGGCTGCCAATCAGGCAGCCACGGAAGGAATTCGCATGGACCCCGAC
CTGGACCCTAATCAGCAGCA

Downstream 100 bases:

>100_bases
GCCGCCGTGTTCCGGGCCGGGATGTCGCCCGCTTGCCGGTGTGGGCGTGGCGCTACTGTTGACAGTTGCCCATCCGGGAC
CCGCCACGGGTGCCACGATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MAGPARQPAVGYRLDTLQHRQRSDLTETKPRVASGEDSGATDPAIRFVVLALLAVDGVLSALAGALLLPLYIGTVPFPIS
GLISGLLNAALVWAAGRWTRSPRLVALPLWTWLLTVAVISMGGPADDVILGGRGVMAYGALLLLVLGVAPPVWVLWRRGR
GG

Sequences:

>Translated_162_residues
MAGPARQPAVGYRLDTLQHRQRSDLTETKPRVASGEDSGATDPAIRFVVLALLAVDGVLSALAGALLLPLYIGTVPFPIS
GLISGLLNAALVWAAGRWTRSPRLVALPLWTWLLTVAVISMGGPADDVILGGRGVMAYGALLLLVLGVAPPVWVLWRRGR
GG
>Mature_161_residues
AGPARQPAVGYRLDTLQHRQRSDLTETKPRVASGEDSGATDPAIRFVVLALLAVDGVLSALAGALLLPLYIGTVPFPISG
LISGLLNAALVWAAGRWTRSPRLVALPLWTWLLTVAVISMGGPADDVILGGRGVMAYGALLLLVLGVAPPVWVLWRRGRG
G

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17008; Mature: 16877

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGPARQPAVGYRLDTLQHRQRSDLTETKPRVASGEDSGATDPAIRFVVLALLAVDGVLS
CCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ALAGALLLPLYIGTVPFPISGLISGLLNAALVWAAGRWTRSPRLVALPLWTWLLTVAVIS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHH
MGGPADDVILGGRGVMAYGALLLLVLGVAPPVWVLWRRGRGG
CCCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCC
>Mature Secondary Structure 
AGPARQPAVGYRLDTLQHRQRSDLTETKPRVASGEDSGATDPAIRFVVLALLAVDGVLS
CCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ALAGALLLPLYIGTVPFPISGLISGLLNAALVWAAGRWTRSPRLVALPLWTWLLTVAVIS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHH
MGGPADDVILGGRGVMAYGALLLLVLGVAPPVWVLWRRGRGG
CCCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA