| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408642
Identifier: 41408642
GI number: 41408642
Start: 2861536
End: 2861958
Strand: Reverse
Name: 41408642
Synonym: MAP2544c
Alternate gene names: NA
Gene position: 2861958-2861536 (Counterclockwise)
Preceding gene: 41408643
Following gene: 41408639
Centisome position: 59.26
GC content: 74.0
Gene sequence:
>423_bases ATGACCGAACCGACGGCCGAGATCGCCGACCCGGTGCGCGGACCGCGCGCCGAGATCGTGCTGCGGCTACGCGATCCCGG CCCCGTCACCGGCATCGCAAGGAGCCTGGCGATCCTGGCGGCATCCCCGGCCGTCGAGGGCGCGGTGCTGGTCGCCGGCG CGCTGATCGACCTGGGCTCGCCGCTGTGGGCGTCGCCGTCGGCCCGGGTGCCGTTCACGGCAGTGCTGTTGGGCCGCAGC GATATTCCCGATCTGCCGCTGCCGCCGCCGCGCGACCCGGTGCAATTCCTGTCGGCGACCCCCATCACCGCCACGGAAGC GGCGTGGGTGCGGCTGAAGGGCGCGGAGGCGATGCGGCAGGCGTGGGACAACGACGGCGTCGACGTGCTGGACCCGAATC GCCCCGCCGCCCAGCCGGATTGA
Upstream 100 bases:
>100_bases CAGCGTGACATTCCTGGGTACCGAAACCATCGAGGTGCTGCGGTTCCGCACGGCCGACGGGCTGGTGCACTACGTCTCGC TGGGCTGCTCGCGTCATCCG
Downstream 100 bases:
>100_bases CCCCCGCCGTTTCCCGCGAGCAGACGCAAAAGCCCCCGACACGCCGGGCGTCGAGGGGCTTTTGCGTCTGCTCGCGGGGG AACTCGCGGGAAATGACACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MTEPTAEIADPVRGPRAEIVLRLRDPGPVTGIARSLAILAASPAVEGAVLVAGALIDLGSPLWASPSARVPFTAVLLGRS DIPDLPLPPPRDPVQFLSATPITATEAAWVRLKGAEAMRQAWDNDGVDVLDPNRPAAQPD
Sequences:
>Translated_140_residues MTEPTAEIADPVRGPRAEIVLRLRDPGPVTGIARSLAILAASPAVEGAVLVAGALIDLGSPLWASPSARVPFTAVLLGRS DIPDLPLPPPRDPVQFLSATPITATEAAWVRLKGAEAMRQAWDNDGVDVLDPNRPAAQPD >Mature_139_residues TEPTAEIADPVRGPRAEIVLRLRDPGPVTGIARSLAILAASPAVEGAVLVAGALIDLGSPLWASPSARVPFTAVLLGRSD IPDLPLPPPRDPVQFLSATPITATEAAWVRLKGAEAMRQAWDNDGVDVLDPNRPAAQPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14623; Mature: 14492
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPTAEIADPVRGPRAEIVLRLRDPGPVTGIARSLAILAASPAVEGAVLVAGALIDLGS CCCCCCHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC PLWASPSARVPFTAVLLGRSDIPDLPLPPPRDPVQFLSATPITATEAAWVRLKGAEAMRQ CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECHHHHHH AWDNDGVDVLDPNRPAAQPD HHCCCCCEEECCCCCCCCCC >Mature Secondary Structure TEPTAEIADPVRGPRAEIVLRLRDPGPVTGIARSLAILAASPAVEGAVLVAGALIDLGS CCCCCHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC PLWASPSARVPFTAVLLGRSDIPDLPLPPPRDPVQFLSATPITATEAAWVRLKGAEAMRQ CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECHHHHHH AWDNDGVDVLDPNRPAAQPD HHCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA