| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is maeB [C]
Identifier: 41408638
GI number: 41408638
Start: 2856983
End: 2858194
Strand: Reverse
Name: maeB [C]
Synonym: MAP2540c
Alternate gene names: 41408638
Gene position: 2858194-2856983 (Counterclockwise)
Preceding gene: 41408639
Following gene: 41408637
Centisome position: 59.18
GC content: 70.13
Gene sequence:
>1212_bases CTGAAGCGCGTGTCCGAATTGCTTGAATCGATACAGAGTCGCGCCGAGCAGGGCGCGATCACGGACGCCGAGATCTTCGC GGCACACGTCGGCGGCAAGCTGTCGGTCAGCCTGACCTCCCCGCTGGACACCCAGCGCGCGCTGTCGATCGCCTACACCC CGGGCGTGGCGCAGGTCAGCCGGGCGATCGCCGCCGACCACCGTCAAGCGGCGCACTACACCTGGGCCAACCGGCTGGTG GCCGTGGTCAGCGACGGCAGCGCGGTGCTCGGCCTGGGCGACATCGGTCCCGCGGCGTCGCTGCCGGTGATGGAGGGCAA GTGCGCCCTGTTCCAGGCGTACGGCGGGCTGAACGCCATCCCGATCGTGCTGGATACCAAGGATCCCGACGAGATCGTGG AGACCCTGGTGCGGCTGCGCCCCACCTTCGGCGCCGTCAACCTCGAGGACATCTCCGCGCCGCGCTGCTTCGAGATCGAA CGCCGACTCATCGAGGCGCTGGACTGCCCGGTGATGCACGACGACCAGCACGGCACCGCGATCGTCGTGCTGGCCGCCCT GATGGGGGCCAGCAAGCTGCTGGGCCGGGACATGAGCTCGCTGAAGGTGGTGGTGTCCGGAGCCGGGGCGGCCGGCGTCG CGTGCACCAATCTCCTTATGGCGATGGGTGTTTCGGACATCACCGTGCTCGACTCGCGGGGAATCCTGCACGCCGGCCGC GACGACATGAACGACGTCAAGGCGGCGTTGTCGCGGCGCACCAACCCGGCCGGCCTGACCGGCAGCCTGGCCGAGGCGAT CCGCGGCGCCGACGTGTTCCTGGGGCTGTCGGGGGGTGTGGTGCCCGAGGAGATGATCGCGGCCATGGCGCCCAATGGGA TCGTGTTCGCGCTGTCCAACCCCGACCCGGAGATCCATCCGCAGATCGCGGCGAAGTACGCCACCGTGGTGGCCACCGGG CGCAGCGATTTCCCCAACCAGATCAACAACGTGCTGGCGTTCCCCGGGGTGTTCCGCGGCGCGCTGGAGGCCGGCGCCCG CCGGATCACCGAGAAGATGATGGTCGCCGCGGCCGAGGCGATCTTCTCCGTCGTCAGCGACGACCTCGCGCCCGATCGGA TCGTGCCCAGCCCGCTGGACACCCGGGTCGGGGACGCGGTCGCCACCGCGGTGGCGCTGGCCACAGAAGTTTCCGACGCT CCCGCCGGGTGA
Upstream 100 bases:
>100_bases ACCACCGCCGAGCTCGCCGACGAGCGCAACGCGGTGACCCAGCTCGGCCTGATCTAAGACCGACGTGGGCAATTAGGACT ACTTATGGGTAGCCCTTACC
Downstream 100 bases:
>100_bases GAATCGGCAGGCTGGTCGCGCCGCTGCTGACCGCCCTACTTGCCGTCACCGGCTGCACGACCGACACCGGCGACCGTCGC GCCCACGCCGAGGTGGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NAD-ME [H]
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MKRVSELLESIQSRAEQGAITDAEIFAAHVGGKLSVSLTSPLDTQRALSIAYTPGVAQVSRAIAADHRQAAHYTWANRLV AVVSDGSAVLGLGDIGPAASLPVMEGKCALFQAYGGLNAIPIVLDTKDPDEIVETLVRLRPTFGAVNLEDISAPRCFEIE RRLIEALDCPVMHDDQHGTAIVVLAALMGASKLLGRDMSSLKVVVSGAGAAGVACTNLLMAMGVSDITVLDSRGILHAGR DDMNDVKAALSRRTNPAGLTGSLAEAIRGADVFLGLSGGVVPEEMIAAMAPNGIVFALSNPDPEIHPQIAAKYATVVATG RSDFPNQINNVLAFPGVFRGALEAGARRITEKMMVAAAEAIFSVVSDDLAPDRIVPSPLDTRVGDAVATAVALATEVSDA PAG
Sequences:
>Translated_403_residues MKRVSELLESIQSRAEQGAITDAEIFAAHVGGKLSVSLTSPLDTQRALSIAYTPGVAQVSRAIAADHRQAAHYTWANRLV AVVSDGSAVLGLGDIGPAASLPVMEGKCALFQAYGGLNAIPIVLDTKDPDEIVETLVRLRPTFGAVNLEDISAPRCFEIE RRLIEALDCPVMHDDQHGTAIVVLAALMGASKLLGRDMSSLKVVVSGAGAAGVACTNLLMAMGVSDITVLDSRGILHAGR DDMNDVKAALSRRTNPAGLTGSLAEAIRGADVFLGLSGGVVPEEMIAAMAPNGIVFALSNPDPEIHPQIAAKYATVVATG RSDFPNQINNVLAFPGVFRGALEAGARRITEKMMVAAAEAIFSVVSDDLAPDRIVPSPLDTRVGDAVATAVALATEVSDA PAG >Mature_403_residues MKRVSELLESIQSRAEQGAITDAEIFAAHVGGKLSVSLTSPLDTQRALSIAYTPGVAQVSRAIAADHRQAAHYTWANRLV AVVSDGSAVLGLGDIGPAASLPVMEGKCALFQAYGGLNAIPIVLDTKDPDEIVETLVRLRPTFGAVNLEDISAPRCFEIE RRLIEALDCPVMHDDQHGTAIVVLAALMGASKLLGRDMSSLKVVVSGAGAAGVACTNLLMAMGVSDITVLDSRGILHAGR DDMNDVKAALSRRTNPAGLTGSLAEAIRGADVFLGLSGGVVPEEMIAAMAPNGIVFALSNPDPEIHPQIAAKYATVVATG RSDFPNQINNVLAFPGVFRGALEAGARRITEKMMVAAAEAIFSVVSDDLAPDRIVPSPLDTRVGDAVATAVALATEVSDA PAG
Specific function: In addition to the NAD-dependent oxidative decarboxylation of L-malate, the enzyme catalyzes the decarboxylation of oxaloacetate [H]
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malic enzymes family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=426, Percent_Identity=26.056338028169, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI62420882, Length=428, Percent_Identity=26.8691588785047, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI62420880, Length=428, Percent_Identity=26.8691588785047, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI239049447, Length=428, Percent_Identity=26.8691588785047, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI4505145, Length=372, Percent_Identity=27.1505376344086, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI270265879, Length=331, Percent_Identity=26.8882175226586, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1788806, Length=391, Percent_Identity=45.5242966751918, Blast_Score=322, Evalue=3e-89, Organism=Caenorhabditis elegans, GI17537199, Length=448, Percent_Identity=24.1071428571429, Blast_Score=81, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6322823, Length=345, Percent_Identity=27.536231884058, Blast_Score=81, Evalue=3e-16, Organism=Drosophila melanogaster, GI24646388, Length=374, Percent_Identity=29.6791443850267, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24646386, Length=374, Percent_Identity=29.6791443850267, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI281363503, Length=405, Percent_Identity=25.4320987654321, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI78707232, Length=405, Percent_Identity=25.4320987654321, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI281363505, Length=405, Percent_Identity=25.4320987654321, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI78707236, Length=405, Percent_Identity=25.4320987654321, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI281362672, Length=347, Percent_Identity=25.6484149855908, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI281362674, Length=347, Percent_Identity=25.6484149855908, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI21356279, Length=347, Percent_Identity=25.6484149855908, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI78707242, Length=360, Percent_Identity=25, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI78707238, Length=360, Percent_Identity=25, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI78707240, Length=360, Percent_Identity=25, Blast_Score=85, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR001891 - InterPro: IPR016040 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M [H]
EC number: =1.1.1.38 [H]
Molecular weight: Translated: 41772; Mature: 41772
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVSELLESIQSRAEQGAITDAEIFAAHVGGKLSVSLTSPLDTQRALSIAYTPGVAQVS CCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCHHHEEEEECCCHHHHH RAIAADHRQAAHYTWANRLVAVVSDGSAVLGLGDIGPAASLPVMEGKCALFQAYGGLNAI HHHHHHHHHHHHHHHHHCEEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCEE PIVLDTKDPDEIVETLVRLRPTFGAVNLEDISAPRCFEIERRLIEALDCPVMHDDQHGTA EEEEECCCHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCEECCCCCHH IVVLAALMGASKLLGRDMSSLKVVVSGAGAAGVACTNLLMAMGVSDITVLDSRGILHAGR HHHHHHHHHHHHHHHCCHHHEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCEECCC DDMNDVKAALSRRTNPAGLTGSLAEAIRGADVFLGLSGGVVPEEMIAAMAPNGIVFALSN CCHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECC PDPEIHPQIAAKYATVVATGRSDFPNQINNVLAFPGVFRGALEAGARRITEKMMVAAAEA CCCCCCHHHHHHHHHEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH IFSVVSDDLAPDRIVPSPLDTRVGDAVATAVALATEVSDAPAG HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKRVSELLESIQSRAEQGAITDAEIFAAHVGGKLSVSLTSPLDTQRALSIAYTPGVAQVS CCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCHHHEEEEECCCHHHHH RAIAADHRQAAHYTWANRLVAVVSDGSAVLGLGDIGPAASLPVMEGKCALFQAYGGLNAI HHHHHHHHHHHHHHHHHCEEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCEE PIVLDTKDPDEIVETLVRLRPTFGAVNLEDISAPRCFEIERRLIEALDCPVMHDDQHGTA EEEEECCCHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCEECCCCCHH IVVLAALMGASKLLGRDMSSLKVVVSGAGAAGVACTNLLMAMGVSDITVLDSRGILHAGR HHHHHHHHHHHHHHHCCHHHEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCEECCC DDMNDVKAALSRRTNPAGLTGSLAEAIRGADVFLGLSGGVVPEEMIAAMAPNGIVFALSN CCHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECC PDPEIHPQIAAKYATVVATGRSDFPNQINNVLAFPGVFRGALEAGARRITEKMMVAAAEA CCCCCCHHHHHHHHHEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH IFSVVSDDLAPDRIVPSPLDTRVGDAVATAVALATEVSDAPAG HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2644282 [H]