| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is deaD
Identifier: 41408619
GI number: 41408619
Start: 2832274
End: 2833974
Strand: Reverse
Name: deaD
Synonym: MAP2521c
Alternate gene names: 41408619
Gene position: 2833974-2832274 (Counterclockwise)
Preceding gene: 41408621
Following gene: 41408618
Centisome position: 58.68
GC content: 68.31
Gene sequence:
>1701_bases ATGACCCTCCCGGACAGCTCGACTGAGGCTGCCTCCCCGACATTTGCCGACCTGCAGATCCATCCCTCGGTTTTGCGGGC GATCGCCGACGTCGGCTACGAGACGCCCACCGGCATCCAGGCCGCGACCATCCCGGCGTTGATGGCCGGTTCCGACGTCG TCGGGCTGGCCCAGACCGGCACCGGCAAGACGGCCGCGTTCGCGATCCCGATCCTGTCCAAGATCGACGCCGCCAGCACC GCCACCCAGGCGCTGGTGCTGGCGCCCACCCGGGAGCTGGCGTTGCAGGTGGCCGAGGCGTTCAGCCGCTACGGCGCGCA TCTGCCGAAGATCAACGTGCTGCCGATCTACGGCGGCTCGTCCTACGCCGTGCAGCTGGCCGGATTGAAACGCGGCGCCC ACGTGGTGGTCGGCACGCCGGGCCGGGTGATCGACCACCTCGAGCGCGGCACGCTGGACCTGTCGCACGTCGACTACCTG GTGCTCGACGAGGCCGACGAGATGCTCACCATGGGGTTTGCCGAAGAGGTCGACCGCATCCTGTCCGAGACCCCGGAATA CAAGCAGGTCGCGCTGTTCTCGGCGACCATGCCGCCCGCGATCCGCAAGCTCACCGCCAAGTATCTGCACGATCCCCTCG AGGTCAGCACCAAAGCGAAAACCACGACCGCCGAGAACATTTCGCAGCGCTACATCCAGGTCGCCGGCCCGCGCAAAATG GACGCGCTGACCCGGGTGCTGGAGGTCGAGCCGTTCGAGGCGATGATCGTGTTCGTCCGGACCAAACAGGCCACCGAGGA AGTCGCCGAAAGGCTCAGGGCGCGCGGCTTCTCGGCGGCCGCGATCAACGGGGACATCCCGCAGGGCCAGCGTGAGCGGA CCGTCGCCGCCCTCAAGGACGGCGGCATCGACATCCTGGTCGCCACCGACGTAGCCGCCCGCGGCCTGGACGTCGAACGG ATCTCACACGTGCTCAACTACGACATCCCGCACGACACCGAGTCCTACGTGCACCGGATCGGACGCACCGGCCGGGCGGG ACGCTCGGGAACCGCGCTGCTGTTCGTCTCCCCGCGAGAACGCCACCTGCTCAAGGCCATTGAGAAGGCGACCCGCCAGC CGCTCACCGAAGCCGAGCTGCCCACCGTCGAGGACGTCAACGCCCAGCGGGTGGCCAAGTTCGCCGACTCCATCACCGCC GCGCTCGGCGCTCCCGGCATCGATCTGTTCCGCAAGTTGGTTCAGGACTACGAACGCGAGCACGACGTCCCGATGGCCGA TATCGCCGCCGCGCTGGCCGTGCAGTCACGCGACGGCGAGGAGTTCCTGATGGCGCCCGAACCGCCGCGGGAGCGACGCG AACGGCACACCGAACGGCGCGAGCGCACCGAGAAACCCAGGAGCACAAGGCCGTTGGCCACCTACCGCATCGCGGTGGGC AAACGGCACAAGATCGGTCCGGGCGCGATCGTGGGCGCCATCGCCAACGAGGGCGGGCTGCATCGCAGCGATTTCGGCCA CATCGCCATCGGACCCGGCTTCTCGCTGGTGGAGTTGCCGGCCAAGCTGCCCAAGTCGACGCTGAAAAGGCTTGAGCAGA CCCGCATCTCCGGAGTGCTGATCAACCTCCAGCCGGACCGGGCGGCGGCCAAGGCGCGCGGTCGGGACGGCGGGAAACCA CGCAGGAAATACGGCGGATGA
Upstream 100 bases:
>100_bases TCGCGGCCGCGGGTGTGGCAGGCGTGGCCGGGCGTCGCCCGGCTGTGCCCACGATCACGGGCCGCACCGGGCGCGGCGCG ACCACTAGACTCCATGGGCG
Downstream 100 bases:
>100_bases CGCTGTCGGAAGAACAAGACGCCCAGGGCGGGCTCGAGCAGACCTCTCGCGTCGACCGCGTCGCCTCGCTGACCGGGGTC CGTGCGGTCGCCGCGCTGCT
Product: DeaD
Products: NA
Alternate protein names: ATP-dependent RNA helicase deaD homolog [H]
Number of amino acids: Translated: 566; Mature: 565
Protein sequence:
>566_residues MTLPDSSTEAASPTFADLQIHPSVLRAIADVGYETPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILSKIDAAST ATQALVLAPTRELALQVAEAFSRYGAHLPKINVLPIYGGSSYAVQLAGLKRGAHVVVGTPGRVIDHLERGTLDLSHVDYL VLDEADEMLTMGFAEEVDRILSETPEYKQVALFSATMPPAIRKLTAKYLHDPLEVSTKAKTTTAENISQRYIQVAGPRKM DALTRVLEVEPFEAMIVFVRTKQATEEVAERLRARGFSAAAINGDIPQGQRERTVAALKDGGIDILVATDVAARGLDVER ISHVLNYDIPHDTESYVHRIGRTGRAGRSGTALLFVSPRERHLLKAIEKATRQPLTEAELPTVEDVNAQRVAKFADSITA ALGAPGIDLFRKLVQDYEREHDVPMADIAAALAVQSRDGEEFLMAPEPPRERRERHTERRERTEKPRSTRPLATYRIAVG KRHKIGPGAIVGAIANEGGLHRSDFGHIAIGPGFSLVELPAKLPKSTLKRLEQTRISGVLINLQPDRAAAKARGRDGGKP RRKYGG
Sequences:
>Translated_566_residues MTLPDSSTEAASPTFADLQIHPSVLRAIADVGYETPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILSKIDAAST ATQALVLAPTRELALQVAEAFSRYGAHLPKINVLPIYGGSSYAVQLAGLKRGAHVVVGTPGRVIDHLERGTLDLSHVDYL VLDEADEMLTMGFAEEVDRILSETPEYKQVALFSATMPPAIRKLTAKYLHDPLEVSTKAKTTTAENISQRYIQVAGPRKM DALTRVLEVEPFEAMIVFVRTKQATEEVAERLRARGFSAAAINGDIPQGQRERTVAALKDGGIDILVATDVAARGLDVER ISHVLNYDIPHDTESYVHRIGRTGRAGRSGTALLFVSPRERHLLKAIEKATRQPLTEAELPTVEDVNAQRVAKFADSITA ALGAPGIDLFRKLVQDYEREHDVPMADIAAALAVQSRDGEEFLMAPEPPRERRERHTERRERTEKPRSTRPLATYRIAVG KRHKIGPGAIVGAIANEGGLHRSDFGHIAIGPGFSLVELPAKLPKSTLKRLEQTRISGVLINLQPDRAAAKARGRDGGKP RRKYGG >Mature_565_residues TLPDSSTEAASPTFADLQIHPSVLRAIADVGYETPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILSKIDAASTA TQALVLAPTRELALQVAEAFSRYGAHLPKINVLPIYGGSSYAVQLAGLKRGAHVVVGTPGRVIDHLERGTLDLSHVDYLV LDEADEMLTMGFAEEVDRILSETPEYKQVALFSATMPPAIRKLTAKYLHDPLEVSTKAKTTTAENISQRYIQVAGPRKMD ALTRVLEVEPFEAMIVFVRTKQATEEVAERLRARGFSAAAINGDIPQGQRERTVAALKDGGIDILVATDVAARGLDVERI SHVLNYDIPHDTESYVHRIGRTGRAGRSGTALLFVSPRERHLLKAIEKATRQPLTEAELPTVEDVNAQRVAKFADSITAA LGAPGIDLFRKLVQDYEREHDVPMADIAAALAVQSRDGEEFLMAPEPPRERRERHTERRERTEKPRSTRPLATYRIAVGK RHKIGPGAIVGAIANEGGLHRSDFGHIAIGPGFSLVELPAKLPKSTLKRLEQTRISGVLINLQPDRAAAKARGRDGGKPR RKYGG
Specific function: Has a helix-destabilizing activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=360, Percent_Identity=38.0555555555556, Blast_Score=273, Evalue=2e-73, Organism=Homo sapiens, GI20149629, Length=373, Percent_Identity=39.142091152815, Blast_Score=266, Evalue=5e-71, Organism=Homo sapiens, GI41327771, Length=392, Percent_Identity=37.5, Blast_Score=256, Evalue=3e-68, Organism=Homo sapiens, GI4758112, Length=387, Percent_Identity=34.3669250645995, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI18375623, Length=387, Percent_Identity=34.3669250645995, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI21040371, Length=386, Percent_Identity=35.4922279792746, Blast_Score=250, Evalue=3e-66, Organism=Homo sapiens, GI4503529, Length=378, Percent_Identity=37.8306878306878, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI224593278, Length=403, Percent_Identity=36.7245657568238, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI83700235, Length=379, Percent_Identity=38.5224274406332, Blast_Score=249, Evalue=7e-66, Organism=Homo sapiens, GI301171467, Length=377, Percent_Identity=37.1352785145889, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI4758138, Length=384, Percent_Identity=36.9791666666667, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI87196351, Length=377, Percent_Identity=37.1352785145889, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI301171475, Length=377, Percent_Identity=37.1352785145889, Blast_Score=246, Evalue=5e-65, Organism=Homo sapiens, GI13129006, Length=417, Percent_Identity=35.9712230215827, Blast_Score=246, Evalue=5e-65, Organism=Homo sapiens, GI169881239, Length=392, Percent_Identity=36.2244897959184, Blast_Score=245, Evalue=8e-65, Organism=Homo sapiens, GI13514809, Length=392, Percent_Identity=36.2244897959184, Blast_Score=245, Evalue=8e-65, Organism=Homo sapiens, GI148613856, Length=362, Percent_Identity=37.292817679558, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI38201710, Length=362, Percent_Identity=37.292817679558, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI45446747, Length=371, Percent_Identity=36.9272237196765, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI45446743, Length=371, Percent_Identity=36.9272237196765, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI164664518, Length=362, Percent_Identity=32.5966850828729, Blast_Score=239, Evalue=4e-63, Organism=Homo sapiens, GI50659095, Length=377, Percent_Identity=36.0742705570292, Blast_Score=238, Evalue=8e-63, Organism=Homo sapiens, GI55749865, Length=371, Percent_Identity=34.2318059299191, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI31542656, Length=373, Percent_Identity=36.1930294906166, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI41327773, Length=353, Percent_Identity=36.5439093484419, Blast_Score=232, Evalue=8e-61, Organism=Homo sapiens, GI222352149, Length=372, Percent_Identity=34.6774193548387, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI41327776, Length=373, Percent_Identity=36.7292225201072, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI262118318, Length=384, Percent_Identity=35.4166666666667, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI216548263, Length=384, Percent_Identity=35.4166666666667, Blast_Score=226, Evalue=5e-59, Organism=Homo sapiens, GI13518015, Length=384, Percent_Identity=35.4166666666667, Blast_Score=226, Evalue=6e-59, Organism=Homo sapiens, GI262231852, Length=384, Percent_Identity=35.4166666666667, Blast_Score=225, Evalue=7e-59, Organism=Homo sapiens, GI188035877, Length=355, Percent_Identity=34.3661971830986, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI21071032, Length=357, Percent_Identity=34.1736694677871, Blast_Score=218, Evalue=8e-57, Organism=Homo sapiens, GI164419743, Length=364, Percent_Identity=34.6153846153846, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI51094101, Length=364, Percent_Identity=34.6153846153846, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI41327779, Length=379, Percent_Identity=33.509234828496, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI6005743, Length=390, Percent_Identity=32.0512820512821, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI8922886, Length=390, Percent_Identity=31.7948717948718, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI62241022, Length=373, Percent_Identity=32.4396782841823, Blast_Score=196, Evalue=7e-50, Organism=Homo sapiens, GI256223453, Length=352, Percent_Identity=31.8181818181818, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI62241024, Length=350, Percent_Identity=32.8571428571429, Blast_Score=185, Evalue=8e-47, Organism=Homo sapiens, GI164419732, Length=378, Percent_Identity=30.1587301587302, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI13514831, Length=400, Percent_Identity=32.75, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI38327634, Length=391, Percent_Identity=32.2250639386189, Blast_Score=183, Evalue=5e-46, Organism=Homo sapiens, GI9506931, Length=395, Percent_Identity=29.620253164557, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI38569505, Length=377, Percent_Identity=29.973474801061, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI38569503, Length=377, Percent_Identity=29.973474801061, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI17505907, Length=417, Percent_Identity=28.2973621103118, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI4826686, Length=336, Percent_Identity=29.4642857142857, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI256773275, Length=398, Percent_Identity=31.1557788944724, Blast_Score=148, Evalue=2e-35, Organism=Homo sapiens, GI154759257, Length=432, Percent_Identity=28.2407407407407, Blast_Score=142, Evalue=9e-34, Organism=Homo sapiens, GI20336298, Length=239, Percent_Identity=32.2175732217573, Blast_Score=126, Evalue=6e-29, Organism=Homo sapiens, GI9966805, Length=324, Percent_Identity=28.3950617283951, Blast_Score=112, Evalue=8e-25, Organism=Escherichia coli, GI87082221, Length=553, Percent_Identity=48.2820976491863, Blast_Score=489, Evalue=1e-139, Organism=Escherichia coli, GI1787016, Length=377, Percent_Identity=41.6445623342175, Blast_Score=293, Evalue=2e-80, Organism=Escherichia coli, GI1787605, Length=339, Percent_Identity=41.8879056047198, Blast_Score=278, Evalue=8e-76, Organism=Escherichia coli, GI1790214, Length=372, Percent_Identity=36.5591397849462, Blast_Score=232, Evalue=6e-62, Organism=Escherichia coli, GI1788930, Length=356, Percent_Identity=39.3258426966292, Blast_Score=229, Evalue=4e-61, Organism=Escherichia coli, GI48994977, Length=378, Percent_Identity=23.2804232804233, Blast_Score=75, Evalue=8e-15, Organism=Caenorhabditis elegans, GI71987143, Length=367, Percent_Identity=38.6920980926431, Blast_Score=288, Evalue=7e-78, Organism=Caenorhabditis elegans, GI71995724, Length=371, Percent_Identity=37.466307277628, Blast_Score=266, Evalue=2e-71, Organism=Caenorhabditis elegans, GI17507121, Length=358, Percent_Identity=37.4301675977654, Blast_Score=265, Evalue=6e-71, Organism=Caenorhabditis elegans, GI17555296, Length=365, Percent_Identity=39.4520547945205, Blast_Score=261, Evalue=7e-70, Organism=Caenorhabditis elegans, GI17510307, Length=376, Percent_Identity=38.563829787234, Blast_Score=249, Evalue=4e-66, Organism=Caenorhabditis elegans, GI17510309, Length=376, Percent_Identity=38.8297872340425, Blast_Score=248, Evalue=4e-66, Organism=Caenorhabditis elegans, GI71995514, Length=376, Percent_Identity=38.8297872340425, Blast_Score=248, Evalue=5e-66, Organism=Caenorhabditis elegans, GI86570094, Length=376, Percent_Identity=38.2978723404255, Blast_Score=248, Evalue=8e-66, Organism=Caenorhabditis elegans, GI17552114, Length=396, Percent_Identity=32.8282828282828, Blast_Score=247, Evalue=1e-65, Organism=Caenorhabditis elegans, GI71995718, Length=376, Percent_Identity=36.968085106383, Blast_Score=247, Evalue=1e-65, Organism=Caenorhabditis elegans, GI71982858, Length=380, Percent_Identity=35, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI32565321, Length=369, Percent_Identity=38.4823848238482, Blast_Score=246, Evalue=3e-65, Organism=Caenorhabditis elegans, GI17510559, Length=385, Percent_Identity=35.5844155844156, Blast_Score=244, Evalue=1e-64, Organism=Caenorhabditis elegans, GI17537549, Length=375, Percent_Identity=37.6, Blast_Score=243, Evalue=1e-64, Organism=Caenorhabditis elegans, GI115533224, Length=356, Percent_Identity=37.0786516853933, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI17552642, Length=372, Percent_Identity=36.0215053763441, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI115532548, Length=406, Percent_Identity=33.0049261083744, Blast_Score=222, Evalue=4e-58, Organism=Caenorhabditis elegans, GI115532546, Length=385, Percent_Identity=33.7662337662338, Blast_Score=221, Evalue=8e-58, Organism=Caenorhabditis elegans, GI17507945, Length=386, Percent_Identity=35.4922279792746, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI17509811, Length=366, Percent_Identity=36.3387978142077, Blast_Score=214, Evalue=9e-56, Organism=Caenorhabditis elegans, GI71999646, Length=342, Percent_Identity=34.2105263157895, Blast_Score=202, Evalue=5e-52, Organism=Caenorhabditis elegans, GI71999644, Length=342, Percent_Identity=34.2105263157895, Blast_Score=201, Evalue=6e-52, Organism=Caenorhabditis elegans, GI17507881, Length=371, Percent_Identity=32.6145552560647, Blast_Score=201, Evalue=8e-52, Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=31.8059299191375, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17536099, Length=404, Percent_Identity=31.9306930693069, Blast_Score=197, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17536101, Length=404, Percent_Identity=31.9306930693069, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=31.8059299191375, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI193206561, Length=347, Percent_Identity=30.835734870317, Blast_Score=195, Evalue=5e-50, Organism=Caenorhabditis elegans, GI17536103, Length=383, Percent_Identity=32.3759791122715, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17505370, Length=389, Percent_Identity=33.1619537275064, Blast_Score=191, Evalue=9e-49, Organism=Caenorhabditis elegans, GI17553716, Length=353, Percent_Identity=30.5949008498584, Blast_Score=181, Evalue=1e-45, Organism=Caenorhabditis elegans, GI193208216, Length=414, Percent_Identity=29.951690821256, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI25148203, Length=419, Percent_Identity=27.4463007159904, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI17508543, Length=382, Percent_Identity=29.0575916230367, Blast_Score=161, Evalue=9e-40, Organism=Caenorhabditis elegans, GI71990816, Length=351, Percent_Identity=32.4786324786325, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI71982862, Length=202, Percent_Identity=36.6336633663366, Blast_Score=149, Evalue=5e-36, Organism=Caenorhabditis elegans, GI17556951, Length=433, Percent_Identity=26.3279445727483, Blast_Score=142, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17507641, Length=400, Percent_Identity=29.75, Blast_Score=138, Evalue=8e-33, Organism=Caenorhabditis elegans, GI32564046, Length=391, Percent_Identity=29.156010230179, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI25148205, Length=348, Percent_Identity=26.4367816091954, Blast_Score=124, Evalue=2e-28, Organism=Caenorhabditis elegans, GI25148291, Length=364, Percent_Identity=27.1978021978022, Blast_Score=124, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71997889, Length=385, Percent_Identity=24.6753246753247, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17557982, Length=399, Percent_Identity=26.5664160401003, Blast_Score=93, Evalue=4e-19, Organism=Caenorhabditis elegans, GI71987152, Length=92, Percent_Identity=42.3913043478261, Blast_Score=92, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6321856, Length=410, Percent_Identity=38.2926829268293, Blast_Score=272, Evalue=1e-73, Organism=Saccharomyces cerevisiae, GI6320224, Length=363, Percent_Identity=36.9146005509642, Blast_Score=267, Evalue=3e-72, Organism=Saccharomyces cerevisiae, GI6324217, Length=359, Percent_Identity=39.8328690807799, Blast_Score=267, Evalue=3e-72, Organism=Saccharomyces cerevisiae, GI6324778, Length=402, Percent_Identity=37.3134328358209, Blast_Score=254, Evalue=2e-68, Organism=Saccharomyces cerevisiae, GI6325138, Length=400, Percent_Identity=36.75, Blast_Score=254, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6322912, Length=356, Percent_Identity=39.0449438202247, Blast_Score=248, Evalue=1e-66, Organism=Saccharomyces cerevisiae, GI6322323, Length=356, Percent_Identity=39.0449438202247, Blast_Score=248, Evalue=1e-66, Organism=Saccharomyces cerevisiae, GI6321360, Length=378, Percent_Identity=38.6243386243386, Blast_Score=244, Evalue=4e-65, Organism=Saccharomyces cerevisiae, GI6320041, Length=365, Percent_Identity=33.6986301369863, Blast_Score=236, Evalue=6e-63, Organism=Saccharomyces cerevisiae, GI6320119, Length=355, Percent_Identity=35.7746478873239, Blast_Score=231, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6323021, Length=387, Percent_Identity=35.6589147286822, Blast_Score=224, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6321963, Length=377, Percent_Identity=34.7480106100796, Blast_Score=207, Evalue=5e-54, Organism=Saccharomyces cerevisiae, GI6320449, Length=392, Percent_Identity=34.1836734693878, Blast_Score=204, Evalue=4e-53, Organism=Saccharomyces cerevisiae, GI6323947, Length=427, Percent_Identity=31.3817330210773, Blast_Score=203, Evalue=6e-53, Organism=Saccharomyces cerevisiae, GI6324620, Length=370, Percent_Identity=31.6216216216216, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6320173, Length=411, Percent_Identity=31.3868613138686, Blast_Score=201, Evalue=3e-52, Organism=Saccharomyces cerevisiae, GI6322427, Length=363, Percent_Identity=33.3333333333333, Blast_Score=200, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6319714, Length=350, Percent_Identity=32.5714285714286, Blast_Score=197, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6321111, Length=365, Percent_Identity=31.2328767123288, Blast_Score=181, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6323306, Length=429, Percent_Identity=26.8065268065268, Blast_Score=163, Evalue=8e-41, Organism=Saccharomyces cerevisiae, GI6321267, Length=382, Percent_Identity=31.413612565445, Blast_Score=160, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6320400, Length=388, Percent_Identity=29.3814432989691, Blast_Score=153, Evalue=6e-38, Organism=Saccharomyces cerevisiae, GI6319618, Length=431, Percent_Identity=27.6102088167053, Blast_Score=151, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6322876, Length=448, Percent_Identity=29.0178571428571, Blast_Score=134, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6324366, Length=370, Percent_Identity=24.8648648648649, Blast_Score=117, Evalue=7e-27, Organism=Saccharomyces cerevisiae, GI6321374, Length=394, Percent_Identity=24.3654822335025, Blast_Score=99, Evalue=1e-21, Organism=Drosophila melanogaster, GI24645031, Length=358, Percent_Identity=37.7094972067039, Blast_Score=270, Evalue=3e-72, Organism=Drosophila melanogaster, GI21355075, Length=370, Percent_Identity=37.027027027027, Blast_Score=261, Evalue=9e-70, Organism=Drosophila melanogaster, GI24585582, Length=398, Percent_Identity=36.9346733668342, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI18857967, Length=383, Percent_Identity=37.3368146214099, Blast_Score=258, Evalue=8e-69, Organism=Drosophila melanogaster, GI28574962, Length=364, Percent_Identity=39.2857142857143, Blast_Score=251, Evalue=1e-66, Organism=Drosophila melanogaster, GI24584399, Length=360, Percent_Identity=36.6666666666667, Blast_Score=247, Evalue=2e-65, Organism=Drosophila melanogaster, GI24582080, Length=366, Percent_Identity=36.8852459016393, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI24582078, Length=366, Percent_Identity=36.8852459016393, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI17136248, Length=366, Percent_Identity=36.8852459016393, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI24582075, Length=366, Percent_Identity=36.8852459016393, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI24644483, Length=383, Percent_Identity=34.2036553524804, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI24644479, Length=383, Percent_Identity=34.2036553524804, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI24644487, Length=383, Percent_Identity=34.2036553524804, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI45551833, Length=383, Percent_Identity=34.2036553524804, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI24644485, Length=383, Percent_Identity=34.2036553524804, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI281361218, Length=383, Percent_Identity=34.2036553524804, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI24644481, Length=383, Percent_Identity=34.2036553524804, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI17985987, Length=404, Percent_Identity=35.6435643564356, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI24584994, Length=382, Percent_Identity=37.17277486911, Blast_Score=241, Evalue=9e-64, Organism=Drosophila melanogaster, GI24642151, Length=356, Percent_Identity=36.2359550561798, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI24581954, Length=350, Percent_Identity=35.4285714285714, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI24581952, Length=350, Percent_Identity=35.4285714285714, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI24581956, Length=350, Percent_Identity=35.4285714285714, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI24583281, Length=362, Percent_Identity=33.1491712707182, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24662330, Length=368, Percent_Identity=35.5978260869565, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24583279, Length=362, Percent_Identity=33.1491712707182, Blast_Score=234, Evalue=2e-61, Organism=Drosophila melanogaster, GI21356161, Length=376, Percent_Identity=35.3723404255319, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI17977678, Length=365, Percent_Identity=36.1643835616438, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI17136814, Length=374, Percent_Identity=36.096256684492, Blast_Score=221, Evalue=8e-58, Organism=Drosophila melanogaster, GI281365720, Length=323, Percent_Identity=37.7708978328173, Blast_Score=204, Evalue=2e-52, Organism=Drosophila melanogaster, GI28575014, Length=355, Percent_Identity=32.3943661971831, Blast_Score=202, Evalue=5e-52, Organism=Drosophila melanogaster, GI28571808, Length=389, Percent_Identity=32.9048843187661, Blast_Score=200, Evalue=3e-51, Organism=Drosophila melanogaster, GI28571809, Length=389, Percent_Identity=32.9048843187661, Blast_Score=200, Evalue=3e-51, Organism=Drosophila melanogaster, GI24666101, Length=363, Percent_Identity=33.8842975206612, Blast_Score=184, Evalue=2e-46, Organism=Drosophila melanogaster, GI24643725, Length=390, Percent_Identity=30, Blast_Score=183, Evalue=4e-46, Organism=Drosophila melanogaster, GI17647335, Length=378, Percent_Identity=28.8359788359788, Blast_Score=180, Evalue=3e-45, Organism=Drosophila melanogaster, GI21355559, Length=383, Percent_Identity=33.9425587467363, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI18859659, Length=444, Percent_Identity=27.4774774774775, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI28571338, Length=444, Percent_Identity=27.4774774774775, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI24642822, Length=376, Percent_Identity=30.8510638297872, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI20130173, Length=471, Percent_Identity=27.1762208067941, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI24668515, Length=333, Percent_Identity=30.3303303303303, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI19920478, Length=417, Percent_Identity=28.2973621103118, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI24640164, Length=341, Percent_Identity=24.633431085044, Blast_Score=112, Evalue=6e-25, Organism=Drosophila melanogaster, GI17136666, Length=435, Percent_Identity=26.4367816091954, Blast_Score=106, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 61254; Mature: 61123
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPDSSTEAASPTFADLQIHPSVLRAIADVGYETPTGIQAATIPALMAGSDVVGLAQTG CCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEECC TGKTAAFAIPILSKIDAASTATQALVLAPTRELALQVAEAFSRYGAHLPKINVLPIYGGS CCCCEEEEHHHHHHHCCHHHHHCEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC SYAVQLAGLKRGAHVVVGTPGRVIDHLERGTLDLSHVDYLVLDEADEMLTMGFAEEVDRI CEEEEEEECCCCCEEEEECCHHHHHHHHHCCEEHHHCCEEEECCCHHHHHHHHHHHHHHH LSETPEYKQVALFSATMPPAIRKLTAKYLHDPLEVSTKAKTTTAENISQRYIQVAGPRKM HHCCCCHHHEEEEECCCCHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHCCCHHH DALTRVLEVEPFEAMIVFVRTKQATEEVAERLRARGFSAAAINGDIPQGQRERTVAALKD HHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCC GGIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGTALLFVSPRE CCEEEEEECCHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCHH RHLLKAIEKATRQPLTEAELPTVEDVNAQRVAKFADSITAALGAPGIDLFRKLVQDYERE HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH HDVPMADIAAALAVQSRDGEEFLMAPEPPRERRERHTERRERTEKPRSTRPLATYRIAVG CCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC KRHKIGPGAIVGAIANEGGLHRSDFGHIAIGPGFSLVELPAKLPKSTLKRLEQTRISGVL CCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCHHHHHHHHCCHHHHHHHHHHHHCEEE INLQPDRAAAKARGRDGGKPRRKYGG EEECCCHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TLPDSSTEAASPTFADLQIHPSVLRAIADVGYETPTGIQAATIPALMAGSDVVGLAQTG CCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEECC TGKTAAFAIPILSKIDAASTATQALVLAPTRELALQVAEAFSRYGAHLPKINVLPIYGGS CCCCEEEEHHHHHHHCCHHHHHCEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC SYAVQLAGLKRGAHVVVGTPGRVIDHLERGTLDLSHVDYLVLDEADEMLTMGFAEEVDRI CEEEEEEECCCCCEEEEECCHHHHHHHHHCCEEHHHCCEEEECCCHHHHHHHHHHHHHHH LSETPEYKQVALFSATMPPAIRKLTAKYLHDPLEVSTKAKTTTAENISQRYIQVAGPRKM HHCCCCHHHEEEEECCCCHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHCCCHHH DALTRVLEVEPFEAMIVFVRTKQATEEVAERLRARGFSAAAINGDIPQGQRERTVAALKD HHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCC GGIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGTALLFVSPRE CCEEEEEECCHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCHH RHLLKAIEKATRQPLTEAELPTVEDVNAQRVAKFADSITAALGAPGIDLFRKLVQDYERE HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH HDVPMADIAAALAVQSRDGEEFLMAPEPPRERRERHTERRERTEKPRSTRPLATYRIAVG CCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC KRHKIGPGAIVGAIANEGGLHRSDFGHIAIGPGFSLVELPAKLPKSTLKRLEQTRISGVL CCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCHHHHHHHHCCHHHHHHHHHHHHCEEE INLQPDRAAAKARGRDGGKPRRKYGG EEECCCHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]