Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408591

Identifier: 41408591

GI number: 41408591

Start: 2798271

End: 2800901

Strand: Reverse

Name: 41408591

Synonym: MAP2493c

Alternate gene names: NA

Gene position: 2800901-2798271 (Counterclockwise)

Preceding gene: 41408592

Following gene: 41408590

Centisome position: 57.99

GC content: 72.67

Gene sequence:

>2631_bases
GTGAAGCTGCACCGGCTGACCCTGACGAACTACCGCGGCATCGCGCACCGGGAAATCGAATTCCCCGACCACGGTGTGGT
GGTGGTGTGCGGCGCCAACGAGATCGGCAAGTCGTCGATGATCGAGGCCCTGGATCTACTGCTGGAGGCCAAGGACCGCT
CCACCAAGAAGGAAGTCAAACAGGTCAAGCCCACCCACAGCGACGTGGGTTCCGAGGTTTCGGCCGAAATCAGTTGCGGC
CCATACCGATTCGTCTACCGCAAACGGTTCCACAAAAAGTGTGAGACGGAGCTGACGGTGATCACGCCGTACCGCGAACA
GCTGACCGGCGACGAAGCCCACGAACGGGTCCGGGCGATGCTGGCCGAGACGGTGGACAGCGACCTGTGGCATGCCCAGC
GCGTGCTGCAGGCGGCGTCGACCGCCGCGGTGGATCTGTCGGGGTGCGACGCGCTGTCCCGCGCGCTCGACGTCGCCGCC
GGCGACAGCGGCGGGCTGTGCGGCACCGAGCCGTTGCTCATCGAACGCATCGACGCCGAATACGGGCGCTATTTCACCCC
GACCGGACGCCCGACGGGGGAGTGGGCAGCCGCGATCGCCCGGCTGGCCGACGCCGAGGTCGCCGTCGCCGAGTGCGCGG
CCGCCGTCGCCGAGGTCGACGAGCGGGTGTCCCGCCACGCCGCGTTGACCGAACAGGTGGCCGACCTGTCCCAGCGCCGC
ATCGCCGCCGGCCCGCGAGTGACGGCCGCGCGGCAGGCCGCCGACCGGATCGCCGAGCTCACCGCCCAGCGCCGGGAAGC
CCAGCTGGTCGCCGAGGCCGCGGCGGCCACCAAAGCCGCGGCGGCCCAGGCCCACTCCGGCCGGCTACAACTGCTCGCCG
ACATCGACACCCGGGCCGCCGTCGTCACGCAGACACATGCTCAGGTCCAGCAGGCCGCGGCCGACCACGCGGCGGCCCAG
GCCGACGCGCAGGCCTGCGACACCGCGCTGCAGCACGCCACCGAGGCCCTGGCCGAGCTGGAGCGCCGGGTGCAGGAGGC
GCAGCGCACCGTCGAGCGGTTGGCCGGCCGCGAGGAGGCCGACCGGTTGGCCGCCCGGCTGGACAAAATTGATGCCATCC
AGCGCGATCGCGAGCGCATCAGCGCCGAGCTGAGCACCATCGCGGTCACCGAGGAGTTGCTGCGCCGCATCGAGGACGCC
GCCGCCGCGGTTGACCGCATCGGCGACCAGTTGGCGTCGACGTCGGCGGCCGTCGAATTCACCGCGGTCGCCGACATTCA
CCTGGTGATCGGTGACCAGCAGGTGTCCCTGCCGGCGGGGCAGAGCTGGTCGATCACCGCCGCCGGGCCCACCGCGGTCG
AGGTTCCCGGTGTGCTGACCGCCCGCGTCATCGCGGGCGCGACCACCCTGGATGTGCAAGCGAAACACGCTGCGGCGCAA
CAAGAACTGGCCGCAGCGCTGACGGCGGGTGCCGTTGCCGACCTTGCCGCCGCCCGATCCGCCGACCAGCGTCGCCGCGA
GCTGCAGGGCACTCGCGACCAGCTCGGCGCCACCCTGGCCGGATTGTGCGGCGACGAGCCGCTCGACGAGCTGCGGTCGC
GGCTGGCCCGGCTGCGCGCCGAGCATCCGGAGCAGCCGGCCGAGCCGACGGGTGGGGCCGCCGACCTCGCCGCCGCCCGC
ACCGAACTCGAAGCGCTCGCGCAGGCCCGCGCCTGCGCGTCGGCCGAATGCGACACGCGCCGTCAGGCCGCCACCGCCGC
GGCCGCCAGGCTTGCCGAAACCGCAACGGCGGCAACGGTTCTGCAGAACAGGCTGGACACCCTGCGGGCCGAGCTGGACG
CGGCCACCGGTCGGCTGGCCGCCGAGCGCGCGTCGGTCGGCGACGAGGAGCTGGCGGCGTCAGCCGATGCGGCGCTGCGC
GCCGAGCAGGCCGCCGAACGCCGGGTCGCCGAACTCGCCGACGCCCTGGCCGCGGCGTCTCCGGACGCCGTCGCCGCCGA
ATTAGCCGATGCCACACAGGAATCCGAGTCGCTGCGGGAGCGCTACGAAGAAGCGGCCGGCGCGCTGCGCGAGGTCACGA
TCGAGCTGTCCGTCTTCGGCAGCGAGGGGCGCCAGGGCAAGCTCGACGCCGCGGAAACGGAGCGCGAGCACGCCGCCAGC
GAGCACAGCCAAGTCGGCCGCCGGGCCCGCGCCGCCCAGCTGCTGCGCTCGGTCATGACGCGGCACCGCGACACCACCCG
GCAGCGCTACGTCGAGCCCTACCGCGCGGAACTGCAGCGGCTCGGCCGTCCGGTGTTCGGCCCCACCTTCGAGGTCGACA
TCGACAGCGACCTGTGCATCCGCAGCCGCACCCTCAACGGCATCACCGTGCCCTACGAGTCCCTGTCCGGCGGCGCCAAG
GAGCAGCTGGGCATCCTGGCACGGCTGGCCGGCGCCGCGCTGGTCGCCAAGGAAGACGCCGTCCCGGTGGTGGTCGACGA
CGCGCTCGGTTTCACCGACCCGGACCGGCTGGCCAAGATGGGGCAGCTGTTCGACAGCGTGGGAAGCCACGGGCAGGTGA
TCGTGCTCACCTGCAGCCCGGACCGGTACGACGGCGTCAAGGGCGCGCACCGCATCGACCTCAGCGCTTAG

Upstream 100 bases:

>100_bases
AGGAGCTGGTGGCGACCGCGCGCCAACAGGATTCCGACACCGCCGCCGACGCGCAGGGGGCGCTGGCGCTGCTGTTACGG
CTCGCCGATCGGGGCGCGGC

Downstream 100 bases:

>100_bases
CCCGCGCGGCCGAGCCGCCGGCCGGCCCCGCCTGCAGAATGGGACCATGGCGGTCCGACCCGAATGACGATGAACGCAAA
GCGGCGGCGCATGCAGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 876; Mature: 876

Protein sequence:

>876_residues
MKLHRLTLTNYRGIAHREIEFPDHGVVVVCGANEIGKSSMIEALDLLLEAKDRSTKKEVKQVKPTHSDVGSEVSAEISCG
PYRFVYRKRFHKKCETELTVITPYREQLTGDEAHERVRAMLAETVDSDLWHAQRVLQAASTAAVDLSGCDALSRALDVAA
GDSGGLCGTEPLLIERIDAEYGRYFTPTGRPTGEWAAAIARLADAEVAVAECAAAVAEVDERVSRHAALTEQVADLSQRR
IAAGPRVTAARQAADRIAELTAQRREAQLVAEAAAATKAAAAQAHSGRLQLLADIDTRAAVVTQTHAQVQQAAADHAAAQ
ADAQACDTALQHATEALAELERRVQEAQRTVERLAGREEADRLAARLDKIDAIQRDRERISAELSTIAVTEELLRRIEDA
AAAVDRIGDQLASTSAAVEFTAVADIHLVIGDQQVSLPAGQSWSITAAGPTAVEVPGVLTARVIAGATTLDVQAKHAAAQ
QELAAALTAGAVADLAAARSADQRRRELQGTRDQLGATLAGLCGDEPLDELRSRLARLRAEHPEQPAEPTGGAADLAAAR
TELEALAQARACASAECDTRRQAATAAAARLAETATAATVLQNRLDTLRAELDAATGRLAAERASVGDEELAASADAALR
AEQAAERRVAELADALAAASPDAVAAELADATQESESLRERYEEAAGALREVTIELSVFGSEGRQGKLDAAETEREHAAS
EHSQVGRRARAAQLLRSVMTRHRDTTRQRYVEPYRAELQRLGRPVFGPTFEVDIDSDLCIRSRTLNGITVPYESLSGGAK
EQLGILARLAGAALVAKEDAVPVVVDDALGFTDPDRLAKMGQLFDSVGSHGQVIVLTCSPDRYDGVKGAHRIDLSA

Sequences:

>Translated_876_residues
MKLHRLTLTNYRGIAHREIEFPDHGVVVVCGANEIGKSSMIEALDLLLEAKDRSTKKEVKQVKPTHSDVGSEVSAEISCG
PYRFVYRKRFHKKCETELTVITPYREQLTGDEAHERVRAMLAETVDSDLWHAQRVLQAASTAAVDLSGCDALSRALDVAA
GDSGGLCGTEPLLIERIDAEYGRYFTPTGRPTGEWAAAIARLADAEVAVAECAAAVAEVDERVSRHAALTEQVADLSQRR
IAAGPRVTAARQAADRIAELTAQRREAQLVAEAAAATKAAAAQAHSGRLQLLADIDTRAAVVTQTHAQVQQAAADHAAAQ
ADAQACDTALQHATEALAELERRVQEAQRTVERLAGREEADRLAARLDKIDAIQRDRERISAELSTIAVTEELLRRIEDA
AAAVDRIGDQLASTSAAVEFTAVADIHLVIGDQQVSLPAGQSWSITAAGPTAVEVPGVLTARVIAGATTLDVQAKHAAAQ
QELAAALTAGAVADLAAARSADQRRRELQGTRDQLGATLAGLCGDEPLDELRSRLARLRAEHPEQPAEPTGGAADLAAAR
TELEALAQARACASAECDTRRQAATAAAARLAETATAATVLQNRLDTLRAELDAATGRLAAERASVGDEELAASADAALR
AEQAAERRVAELADALAAASPDAVAAELADATQESESLRERYEEAAGALREVTIELSVFGSEGRQGKLDAAETEREHAAS
EHSQVGRRARAAQLLRSVMTRHRDTTRQRYVEPYRAELQRLGRPVFGPTFEVDIDSDLCIRSRTLNGITVPYESLSGGAK
EQLGILARLAGAALVAKEDAVPVVVDDALGFTDPDRLAKMGQLFDSVGSHGQVIVLTCSPDRYDGVKGAHRIDLSA
>Mature_876_residues
MKLHRLTLTNYRGIAHREIEFPDHGVVVVCGANEIGKSSMIEALDLLLEAKDRSTKKEVKQVKPTHSDVGSEVSAEISCG
PYRFVYRKRFHKKCETELTVITPYREQLTGDEAHERVRAMLAETVDSDLWHAQRVLQAASTAAVDLSGCDALSRALDVAA
GDSGGLCGTEPLLIERIDAEYGRYFTPTGRPTGEWAAAIARLADAEVAVAECAAAVAEVDERVSRHAALTEQVADLSQRR
IAAGPRVTAARQAADRIAELTAQRREAQLVAEAAAATKAAAAQAHSGRLQLLADIDTRAAVVTQTHAQVQQAAADHAAAQ
ADAQACDTALQHATEALAELERRVQEAQRTVERLAGREEADRLAARLDKIDAIQRDRERISAELSTIAVTEELLRRIEDA
AAAVDRIGDQLASTSAAVEFTAVADIHLVIGDQQVSLPAGQSWSITAAGPTAVEVPGVLTARVIAGATTLDVQAKHAAAQ
QELAAALTAGAVADLAAARSADQRRRELQGTRDQLGATLAGLCGDEPLDELRSRLARLRAEHPEQPAEPTGGAADLAAAR
TELEALAQARACASAECDTRRQAATAAAARLAETATAATVLQNRLDTLRAELDAATGRLAAERASVGDEELAASADAALR
AEQAAERRVAELADALAAASPDAVAAELADATQESESLRERYEEAAGALREVTIELSVFGSEGRQGKLDAAETEREHAAS
EHSQVGRRARAAQLLRSVMTRHRDTTRQRYVEPYRAELQRLGRPVFGPTFEVDIDSDLCIRSRTLNGITVPYESLSGGAK
EQLGILARLAGAALVAKEDAVPVVVDDALGFTDPDRLAKMGQLFDSVGSHGQVIVLTCSPDRYDGVKGAHRIDLSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 93153; Mature: 93153

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00359 RIBOSOMAL_L11

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLHRLTLTNYRGIAHREIEFPDHGVVVVCGANEIGKSSMIEALDLLLEAKDRSTKKEVK
CCCEEEEECCCCCCCEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHH
QVKPTHSDVGSEVSAEISCGPYRFVYRKRFHKKCETELTVITPYREQLTGDEAHERVRAM
HCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHCCHHHHHHHHHH
LAETVDSDLWHAQRVLQAASTAAVDLSGCDALSRALDVAAGDSGGLCGTEPLLIERIDAE
HHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
YGRYFTPTGRPTGEWAAAIARLADAEVAVAECAAAVAEVDERVSRHAALTEQVADLSQRR
HCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAAGPRVTAARQAADRIAELTAQRREAQLVAEAAAATKAAAAQAHSGRLQLLADIDTRAA
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHH
VVTQTHAQVQQAAADHAAAQADAQACDTALQHATEALAELERRVQEAQRTVERLAGREEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DRLAARLDKIDAIQRDRERISAELSTIAVTEELLRRIEDAAAAVDRIGDQLASTSAAVEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
TAVADIHLVIGDQQVSLPAGQSWSITAAGPTAVEVPGVLTARVIAGATTLDVQAKHAAAQ
EEEEEEEEEECCCEEECCCCCCEEEEECCCCCEECCCHHHHHHHHCCCEEEHHHHHHHHH
QELAAALTAGAVADLAAARSADQRRRELQGTRDQLGATLAGLCGDEPLDELRSRLARLRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EHPEQPAEPTGGAADLAAARTELEALAQARACASAECDTRRQAATAAAARLAETATAATV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LQNRLDTLRAELDAATGRLAAERASVGDEELAASADAALRAEQAAERRVAELADALAAAS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDAVAAELADATQESESLRERYEEAAGALREVTIELSVFGSEGRQGKLDAAETEREHAAS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHH
EHSQVGRRARAAQLLRSVMTRHRDTTRQRYVEPYRAELQRLGRPVFGPTFEVDIDSDLCI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCHHH
RSRTLNGITVPYESLSGGAKEQLGILARLAGAALVAKEDAVPVVVDDALGFTDPDRLAKM
HHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHEECCCCCCEEEECCCCCCCHHHHHHH
GQLFDSVGSHGQVIVLTCSPDRYDGVKGAHRIDLSA
HHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLHRLTLTNYRGIAHREIEFPDHGVVVVCGANEIGKSSMIEALDLLLEAKDRSTKKEVK
CCCEEEEECCCCCCCEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHH
QVKPTHSDVGSEVSAEISCGPYRFVYRKRFHKKCETELTVITPYREQLTGDEAHERVRAM
HCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHCCHHHHHHHHHH
LAETVDSDLWHAQRVLQAASTAAVDLSGCDALSRALDVAAGDSGGLCGTEPLLIERIDAE
HHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
YGRYFTPTGRPTGEWAAAIARLADAEVAVAECAAAVAEVDERVSRHAALTEQVADLSQRR
HCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAAGPRVTAARQAADRIAELTAQRREAQLVAEAAAATKAAAAQAHSGRLQLLADIDTRAA
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHH
VVTQTHAQVQQAAADHAAAQADAQACDTALQHATEALAELERRVQEAQRTVERLAGREEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DRLAARLDKIDAIQRDRERISAELSTIAVTEELLRRIEDAAAAVDRIGDQLASTSAAVEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
TAVADIHLVIGDQQVSLPAGQSWSITAAGPTAVEVPGVLTARVIAGATTLDVQAKHAAAQ
EEEEEEEEEECCCEEECCCCCCEEEEECCCCCEECCCHHHHHHHHCCCEEEHHHHHHHHH
QELAAALTAGAVADLAAARSADQRRRELQGTRDQLGATLAGLCGDEPLDELRSRLARLRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EHPEQPAEPTGGAADLAAARTELEALAQARACASAECDTRRQAATAAAARLAETATAATV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LQNRLDTLRAELDAATGRLAAERASVGDEELAASADAALRAEQAAERRVAELADALAAAS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDAVAAELADATQESESLRERYEEAAGALREVTIELSVFGSEGRQGKLDAAETEREHAAS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHH
EHSQVGRRARAAQLLRSVMTRHRDTTRQRYVEPYRAELQRLGRPVFGPTFEVDIDSDLCI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCHHH
RSRTLNGITVPYESLSGGAKEQLGILARLAGAALVAKEDAVPVVVDDALGFTDPDRLAKM
HHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHEECCCCCCEEEECCCCCCCHHHHHHH
GQLFDSVGSHGQVIVLTCSPDRYDGVKGAHRIDLSA
HHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]