Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41408563

Identifier: 41408563

GI number: 41408563

Start: 2769965

End: 2770270

Strand: Reverse

Name: 41408563

Synonym: MAP2465c

Alternate gene names: NA

Gene position: 2770270-2769965 (Counterclockwise)

Preceding gene: 41408564

Following gene: 41408562

Centisome position: 57.36

GC content: 57.84

Gene sequence:

>306_bases
CTGGAGCCCGGGAGTCACCGTCGTCGGTTGATCCACAGCGTGGCCGGAGGGTTTGCTTGCTTCCGGCAGGGATGGGGGCT
ATCCTCGGAGCCGTCCAGCAATCGCAGCATCTGCATCTGCATACATACTGCCTTGCCGCTAGGACAACACCAATTCTTCT
TGTGGACGAGGTTCGCCGTTTACTCCGCCGATCCAGGCGATCACCGTTGCAAAGTCGATGATTGGGCGCACTCGGCAATT
TGGCTGAATGCAACGAACCCCCTGTATGAGCTGATCAGCGGGGGAAGAAAGGAAATCCGTGACTGA

Upstream 100 bases:

>100_bases
TCGCACTGACCACAGCGTCGGCGTTGCCCCCGGAAGTGATGGAGTACGGGGCGGCGAACGGATTCACCCTCGCCGAAATG
ACCGCCGGCGAAGGAGTTCG

Downstream 100 bases:

>100_bases
TACGGACCTGTTCACGGCTGGCGAAAACACTGACGCCAATCAACTCTCTACTGCCGTGACCACAGACACCCCAGACGCGA
AGACGCATGCGCCGGTCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MEPGSHRRRLIHSVAGGFACFRQGWGLSSEPSSNRSICICIHTALPLGQHQFFLWTRFAVYSADPGDHRCKVDDWAHSAI
WLNATNPLYELISGGRKEIRD

Sequences:

>Translated_101_residues
MEPGSHRRRLIHSVAGGFACFRQGWGLSSEPSSNRSICICIHTALPLGQHQFFLWTRFAVYSADPGDHRCKVDDWAHSAI
WLNATNPLYELISGGRKEIRD
>Mature_101_residues
MEPGSHRRRLIHSVAGGFACFRQGWGLSSEPSSNRSICICIHTALPLGQHQFFLWTRFAVYSADPGDHRCKVDDWAHSAI
WLNATNPLYELISGGRKEIRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11409; Mature: 11409

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPGSHRRRLIHSVAGGFACFRQGWGLSSEPSSNRSICICIHTALPLGQHQFFLWTRFAV
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEEE
YSADPGDHRCKVDDWAHSAIWLNATNPLYELISGGRKEIRD
EECCCCCCEEECCCCCCEEEEEECCCHHHHHHCCCHHHCCC
>Mature Secondary Structure
MEPGSHRRRLIHSVAGGFACFRQGWGLSSEPSSNRSICICIHTALPLGQHQFFLWTRFAV
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEEE
YSADPGDHRCKVDDWAHSAIWLNATNPLYELISGGRKEIRD
EECCCCCCEEECCCCCCEEEEEECCCHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA