| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408556
Identifier: 41408556
GI number: 41408556
Start: 2763080
End: 2763562
Strand: Reverse
Name: 41408556
Synonym: MAP2458c
Alternate gene names: NA
Gene position: 2763562-2763080 (Counterclockwise)
Preceding gene: 41408557
Following gene: 41408555
Centisome position: 57.22
GC content: 67.49
Gene sequence:
>483_bases GTGACGACACCAGCGCAGGACGCGCCGTTGGTGTTCCCCTCTGTTGCTTTCCGTCCGGTTCGGCTGTTCGCGATCAGCGT TGCCATCACCGCGGTGGCGGTGCTCGCCGCCGGACTGTCCGGTCACCTGATGGTCGGGGTCTTCTTCGGCATCGGGTTGC TGCTGGGTTTGCTCAACGCCGTACTGGTGCGCCGCTCGGTTGACTCGATCACCGCCAAGGAGCACCCGCTGAAGAGGTCG ATGGCGGTCAACTCGGCGTCCCGGCTGGCCATCATCACCGTCGTCGGGCTGATCATCGCCTACCTGTTCCGGCCCGCCGG CCTGGGCGTGCTGTTCGGGCTGGCGCTGTTCCAGGTCCTCTTGGTGGCATCGACGGCGCTGCCGGTGTGGAAGAAACTGC GTGCCGGTGACTGGGCGCCGTCCGCCGACGGCGCCGCCGCGGGGTCGGACGGAACGGAAGGAAGGAACAGCACCGATGCC TGA
Upstream 100 bases:
>100_bases CCCTTGGGTGATTCAACTGTGACGTGCGATACGCTCGGCGGGCCACCGATCAGTCGGTCGGGGGGTTCCCGTTCCACCAA CCTGGGATTGAGGTGCTGCA
Downstream 100 bases:
>100_bases GACGACGTTCCTGGCCGAATCCGCCATCGAGGTCGGCGAACACAACCACGCCACCTGGTTGGGCATGACCGTCAACACCG ACACGATTCTGTCGACCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MTTPAQDAPLVFPSVAFRPVRLFAISVAITAVAVLAAGLSGHLMVGVFFGIGLLLGLLNAVLVRRSVDSITAKEHPLKRS MAVNSASRLAIITVVGLIIAYLFRPAGLGVLFGLALFQVLLVASTALPVWKKLRAGDWAPSADGAAAGSDGTEGRNSTDA
Sequences:
>Translated_160_residues MTTPAQDAPLVFPSVAFRPVRLFAISVAITAVAVLAAGLSGHLMVGVFFGIGLLLGLLNAVLVRRSVDSITAKEHPLKRS MAVNSASRLAIITVVGLIIAYLFRPAGLGVLFGLALFQVLLVASTALPVWKKLRAGDWAPSADGAAAGSDGTEGRNSTDA >Mature_159_residues TTPAQDAPLVFPSVAFRPVRLFAISVAITAVAVLAAGLSGHLMVGVFFGIGLLLGLLNAVLVRRSVDSITAKEHPLKRSM AVNSASRLAIITVVGLIIAYLFRPAGLGVLFGLALFQVLLVASTALPVWKKLRAGDWAPSADGAAAGSDGTEGRNSTDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML1138 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005598 [H]
Pfam domain/function: PF03899 ATP_synt_I [H]
EC number: NA
Molecular weight: Translated: 16492; Mature: 16360
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPAQDAPLVFPSVAFRPVRLFAISVAITAVAVLAAGLSGHLMVGVFFGIGLLLGLLNA CCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VLVRRSVDSITAKEHPLKRSMAVNSASRLAIITVVGLIIAYLFRPAGLGVLFGLALFQVL HHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LVASTALPVWKKLRAGDWAPSADGAAAGSDGTEGRNSTDA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTPAQDAPLVFPSVAFRPVRLFAISVAITAVAVLAAGLSGHLMVGVFFGIGLLLGLLNA CCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VLVRRSVDSITAKEHPLKRSMAVNSASRLAIITVVGLIIAYLFRPAGLGVLFGLALFQVL HHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LVASTALPVWKKLRAGDWAPSADGAAAGSDGTEGRNSTDA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]