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The map label for this gene is atpD

Identifier: 41408549

GI number: 41408549

Start: 2755965

End: 2757173

Strand: Reverse

Name: atpD

Synonym: MAP2451c

Alternate gene names: 41408549

Gene position: 2757173-2755965 (Counterclockwise)

Preceding gene: 41408550

Following gene: 41408548

Centisome position: 57.09

GC content: 66.34

Gene sequence:

>1209_bases
GTGCGCGGCGTCGAGGTGATCGACACCGGTCGTTCCATCTCGGTGCCGGTCGGCCAGGAGGTCAAGGGCCACGTGTTCAA
CGCCCTGGGGCACTGCCTGGACAAGCCGGGTTACGGAGAAGACTTCGAACACTGGTCGATTCACCGCAAGCCGCCGCCGT
TCGAGGAGCTGGAGCCCCGCACGGAGATGCTCGAGACGGGTCTGAAGGTCGTCGACCTGCTCACACCGTACGTGCGTGGC
GGCAAGATCGCCCTGTTCGGCGGCGCCGGCGTGGGCAAGACGGTGCTCATCCAGGAGATGATCAACCGCATCGCCCGCAA
CTTCGGTGGTACCTCGGTGTTCGCCGGGGTGGGGGAGCGCACCCGTGAGGGCAACGACCTGTGGGTCGAGTTGCAGGAAG
CCAACGTGCTCAAGGACACCGCGCTGGTGTTCGGTCAGATGGACGAGCCGCCCGGCACCCGTATGCGGGTGGCGCTGTCC
GCGTTGACCATGGCGGAGTGGTTCCGCGACGAGGCGGGCCAGGACGTGCTGTTGTTCATCGACAACATCTTCCGGTTCAC
CCAGGCCGGCTCCGAGGTCTCGACCCTGCTCGGCCGGATGCCCTCGGCGGTGGGGTATCAGCCCACGCTGGCCGACGAGA
TGGGCGAGCTGCAGGAGCGCATCACCTCGACCCGTGGCCGGTCCATCACGTCGATGCAGGCGGTCTACGTGCCCGCCGAC
GACTACACCGACCCGGCGCCGGCGACGACGTTCGCGCACCTGGACGCCACCACCGAGCTGTCGCGTTCGGTGTTCTCCAA
GGGCATCTTCCCCGCGGTGGACCCGCTGGCGTCCAGCTCGACCATTCTCGACCCGGGCGTGGTCGGCGAAGAGCACTACC
GGGTGGCGCAGGAAGTCATCCGAATCCTGCAGCGCTACAAGGACCTTCAGGACATCATCGCCATCCTCGGTATCGACGAG
CTGTCCGAGGAGGACAAGCAGTTGGTCAACCGGGCGCGGCGGATCGAGCGGTTCCTGTCGCAGAACATGATGGCGGCCGA
GCAGTTCACCGGCCAGCCGGGTTCGACGGTCCCGCTCAAGGAGACCATCGAGGCATTCGACCGGCTCACCAAGGGTGAGT
TCGACCACGTGCCCGAGCAGGCCTTCTTCCTGATCGGTGGCCTGGACGACCTGGCCAAGAAGGCAGAGAGCCTTGGCGCC
AAGCTGTAA

Upstream 100 bases:

>100_bases
ACGTTCGAGGAGCTGGCCAAGACGCTGACGCTCGAGGTCGCCCAGCACCTCGGGGACAACCTGGTGCGCACCATGCTCGC
TGCAGCCCACCGACGGCCTG

Downstream 100 bases:

>100_bases
CCCGCGGCTGGACCGAAAGGTATCGAAAGGTGCTGTGGCATGGCTGAATTGAACGTTGAGATCGTCGCTGTCGACCGCAA
GATCTGGTCGGGTGAGGCAA

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta; F-ATPase subunit beta [H]

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MRGVEVIDTGRSISVPVGQEVKGHVFNALGHCLDKPGYGEDFEHWSIHRKPPPFEELEPRTEMLETGLKVVDLLTPYVRG
GKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEANVLKDTALVFGQMDEPPGTRMRVALS
ALTMAEWFRDEAGQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSTRGRSITSMQAVYVPAD
DYTDPAPATTFAHLDATTELSRSVFSKGIFPAVDPLASSSTILDPGVVGEEHYRVAQEVIRILQRYKDLQDIIAILGIDE
LSEEDKQLVNRARRIERFLSQNMMAAEQFTGQPGSTVPLKETIEAFDRLTKGEFDHVPEQAFFLIGGLDDLAKKAESLGA
KL

Sequences:

>Translated_402_residues
MRGVEVIDTGRSISVPVGQEVKGHVFNALGHCLDKPGYGEDFEHWSIHRKPPPFEELEPRTEMLETGLKVVDLLTPYVRG
GKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEANVLKDTALVFGQMDEPPGTRMRVALS
ALTMAEWFRDEAGQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSTRGRSITSMQAVYVPAD
DYTDPAPATTFAHLDATTELSRSVFSKGIFPAVDPLASSSTILDPGVVGEEHYRVAQEVIRILQRYKDLQDIIAILGIDE
LSEEDKQLVNRARRIERFLSQNMMAAEQFTGQPGSTVPLKETIEAFDRLTKGEFDHVPEQAFFLIGGLDDLAKKAESLGA
KL
>Mature_402_residues
MRGVEVIDTGRSISVPVGQEVKGHVFNALGHCLDKPGYGEDFEHWSIHRKPPPFEELEPRTEMLETGLKVVDLLTPYVRG
GKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEANVLKDTALVFGQMDEPPGTRMRVALS
ALTMAEWFRDEAGQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSTRGRSITSMQAVYVPAD
DYTDPAPATTFAHLDATTELSRSVFSKGIFPAVDPLASSSTILDPGVVGEEHYRVAQEVIRILQRYKDLQDIIAILGIDE
LSEEDKQLVNRARRIERFLSQNMMAAEQFTGQPGSTVPLKETIEAFDRLTKGEFDHVPEQAFFLIGGLDDLAKKAESLGA
KL

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=404, Percent_Identity=63.1188118811881, Blast_Score=513, Evalue=1e-145,
Organism=Homo sapiens, GI19913424, Length=323, Percent_Identity=28.1733746130031, Blast_Score=109, Evalue=6e-24,
Organism=Homo sapiens, GI19913426, Length=358, Percent_Identity=24.5810055865922, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI19913428, Length=356, Percent_Identity=24.438202247191, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI50345984, Length=416, Percent_Identity=26.4423076923077, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI4757810, Length=416, Percent_Identity=26.4423076923077, Blast_Score=92, Evalue=8e-19,
Organism=Escherichia coli, GI1790170, Length=397, Percent_Identity=61.9647355163728, Blast_Score=500, Evalue=1e-143,
Organism=Escherichia coli, GI1788251, Length=305, Percent_Identity=31.8032786885246, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1790172, Length=296, Percent_Identity=26.6891891891892, Blast_Score=95, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI25144756, Length=407, Percent_Identity=61.9164619164619, Blast_Score=504, Evalue=1e-143,
Organism=Caenorhabditis elegans, GI17565854, Length=323, Percent_Identity=29.1021671826625, Blast_Score=115, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI17510931, Length=354, Percent_Identity=24.8587570621469, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17570191, Length=352, Percent_Identity=24.4318181818182, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI71988080, Length=344, Percent_Identity=26.1627906976744, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71988063, Length=344, Percent_Identity=26.1627906976744, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71988074, Length=324, Percent_Identity=25, Blast_Score=69, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6322581, Length=396, Percent_Identity=63.8888888888889, Blast_Score=508, Evalue=1e-145,
Organism=Saccharomyces cerevisiae, GI6319603, Length=358, Percent_Identity=25.4189944134078, Blast_Score=103, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6319370, Length=351, Percent_Identity=26.4957264957265, Blast_Score=92, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6320016, Length=254, Percent_Identity=25.9842519685039, Blast_Score=71, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24638766, Length=404, Percent_Identity=61.8811881188119, Blast_Score=506, Evalue=1e-144,
Organism=Drosophila melanogaster, GI28574560, Length=407, Percent_Identity=61.1793611793612, Blast_Score=492, Evalue=1e-139,
Organism=Drosophila melanogaster, GI24583992, Length=347, Percent_Identity=27.6657060518732, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24583988, Length=348, Percent_Identity=27.5862068965517, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24583986, Length=348, Percent_Identity=27.5862068965517, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24583984, Length=348, Percent_Identity=27.5862068965517, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI20129479, Length=322, Percent_Identity=27.9503105590062, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI281361666, Length=359, Percent_Identity=25.9052924791086, Blast_Score=108, Evalue=8e-24,
Organism=Drosophila melanogaster, GI24646341, Length=359, Percent_Identity=25.9052924791086, Blast_Score=108, Evalue=8e-24,
Organism=Drosophila melanogaster, GI17136796, Length=359, Percent_Identity=25.9052924791086, Blast_Score=108, Evalue=8e-24,
Organism=Drosophila melanogaster, GI24658560, Length=344, Percent_Identity=25.5813953488372, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 44288; Mature: 44288

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGVEVIDTGRSISVPVGQEVKGHVFNALGHCLDKPGYGEDFEHWSIHRKPPPFEELEPR
CCCCEEEECCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCH
TEMLETGLKVVDLLTPYVRGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGER
HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCC
TREGNDLWVELQEANVLKDTALVFGQMDEPPGTRMRVALSALTMAEWFRDEAGQDVLLFI
CCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHH
DNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSTRGRSITSMQAVYVPAD
HHHHHHHHCCHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCC
DYTDPAPATTFAHLDATTELSRSVFSKGIFPAVDPLASSSTILDPGVVGEEHYRVAQEVI
CCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
RILQRYKDLQDIIAILGIDELSEEDKQLVNRARRIERFLSQNMMAAEQFTGQPGSTVPLK
HHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ETIEAFDRLTKGEFDHVPEQAFFLIGGLDDLAKKAESLGAKL
HHHHHHHHHHCCCCCCCCHHHHEEECCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRGVEVIDTGRSISVPVGQEVKGHVFNALGHCLDKPGYGEDFEHWSIHRKPPPFEELEPR
CCCCEEEECCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCH
TEMLETGLKVVDLLTPYVRGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGER
HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCC
TREGNDLWVELQEANVLKDTALVFGQMDEPPGTRMRVALSALTMAEWFRDEAGQDVLLFI
CCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHH
DNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSTRGRSITSMQAVYVPAD
HHHHHHHHCCHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCC
DYTDPAPATTFAHLDATTELSRSVFSKGIFPAVDPLASSSTILDPGVVGEEHYRVAQEVI
CCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
RILQRYKDLQDIIAILGIDELSEEDKQLVNRARRIERFLSQNMMAAEQFTGQPGSTVPLK
HHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ETIEAFDRLTKGEFDHVPEQAFFLIGGLDDLAKKAESLGAKL
HHHHHHHHHHCCCCCCCCHHHHEEECCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA