| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408525
Identifier: 41408525
GI number: 41408525
Start: 2722550
End: 2723593
Strand: Reverse
Name: 41408525
Synonym: MAP2427c
Alternate gene names: NA
Gene position: 2723593-2722550 (Counterclockwise)
Preceding gene: 41408526
Following gene: 41408524
Centisome position: 56.39
GC content: 76.72
Gene sequence:
>1044_bases ATGAACGCCATCACCGACGTCGGCGGCATCCGCGTCGGCCACCACCAGCGATTGGATCCCGACGCGTCGCTGGGCGCCGG CTGGGCCTGCGGCGTCACCGTCGTGCTCACCGCGCCGGGCACCGTCGGCGCGGTGGACTGCCGCGGCGGTGCGCCCGGCA CCCGCGAGACCGACCTGCTGGACCCGGCCAACACCGTGCGGTTCGTGGACGCGGTGCTGCTCGCCGGCGGTAGTGCCTAC GGGCTGGCCGCCGCCGACGGCGTGATGCGCTGGCTGGAGGAACACGACCGTGGGGTGGCGATGGACGGCGGCGTGGTGCC CATCGTCCCCGGGGCGGTGATCTTCGACCTGCCCGTCGGCGGCTGGCAGTGCCGCCCGACGGCCGAGTTCGGCTACCTGG CCTGCGCCGCCGCCGCGCGCGACGACGACGCGCCGGCCGTCGGGACCGTCGGCGCCGGGGTGGGGGCGCGGGCCGGCGCG CTCAAGGGCGGCGTCGGGACCGCCTCGCGCACCTTGCCCAGCGGTGTGACCGTCGGGGCGCTGGCCGTGGTGAACTCCGC GGGCGAGGTCGTCGACCGGGCGACCGGATTGCCGTGGATGACGGACCTGGTCGAGCAGTTCGGGCTGCGACCGCCGCCGG CCGAGCAGATCGAGGCGTTCGCCGCGTTGCCGTCGCCGTCGAACCCGCTGGACAACCCGCTCAACACCGTCATCGCGGTG GTGGCCACCGATGCCGCGCTGAGCGCGGCGGCCTGCCGGCGGGTGGCCGTCGCGGCCCACGACGGCCTGGCCCGCAGCAT CCGCCCGGCCCACACCCCGGTCGACGGTGACACCGTGTTCGTGCTGGCCACCGGGGCGGTCGAGGTGCCGCCCGAGGCCG ATACGCCGGCCGCCTTCTCGCCGGAGACCCGGTTGGCCACCGAGGTGGGCGTCGCCGCCGCCGACTGCCTGGCGCACGCG GTGCTGGGCGGTGTGCTGGCCGCCGACTCCGTCGCCGGCATCCCGAGCTACCGGGACGTGCTGCCCGGCGCGCTGGGCCG GTGA
Upstream 100 bases:
>100_bases CCGCTGGCCGTGCACTTCGACGTCTACCAGTGGCTGACCGTGCTGCAGGAGTACCTGGTCCTGGTGCTCATGGGGCCCCG GTCATCGTGACGGCTCGGCG
Downstream 100 bases:
>100_bases ACGCCGACCGGTAGCCTTGACGATGCTGGCAGCGCGCTGGAAGGGCAGCCATGGGTAAGACCACCGGACGGGCACCTGCC GCCCAGACCAAGAAGCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MNAITDVGGIRVGHHQRLDPDASLGAGWACGVTVVLTAPGTVGAVDCRGGAPGTRETDLLDPANTVRFVDAVLLAGGSAY GLAAADGVMRWLEEHDRGVAMDGGVVPIVPGAVIFDLPVGGWQCRPTAEFGYLACAAAARDDDAPAVGTVGAGVGARAGA LKGGVGTASRTLPSGVTVGALAVVNSAGEVVDRATGLPWMTDLVEQFGLRPPPAEQIEAFAALPSPSNPLDNPLNTVIAV VATDAALSAAACRRVAVAAHDGLARSIRPAHTPVDGDTVFVLATGAVEVPPEADTPAAFSPETRLATEVGVAAADCLAHA VLGGVLAADSVAGIPSYRDVLPGALGR
Sequences:
>Translated_347_residues MNAITDVGGIRVGHHQRLDPDASLGAGWACGVTVVLTAPGTVGAVDCRGGAPGTRETDLLDPANTVRFVDAVLLAGGSAY GLAAADGVMRWLEEHDRGVAMDGGVVPIVPGAVIFDLPVGGWQCRPTAEFGYLACAAAARDDDAPAVGTVGAGVGARAGA LKGGVGTASRTLPSGVTVGALAVVNSAGEVVDRATGLPWMTDLVEQFGLRPPPAEQIEAFAALPSPSNPLDNPLNTVIAV VATDAALSAAACRRVAVAAHDGLARSIRPAHTPVDGDTVFVLATGAVEVPPEADTPAAFSPETRLATEVGVAAADCLAHA VLGGVLAADSVAGIPSYRDVLPGALGR >Mature_347_residues MNAITDVGGIRVGHHQRLDPDASLGAGWACGVTVVLTAPGTVGAVDCRGGAPGTRETDLLDPANTVRFVDAVLLAGGSAY GLAAADGVMRWLEEHDRGVAMDGGVVPIVPGAVIFDLPVGGWQCRPTAEFGYLACAAAARDDDAPAVGTVGAGVGARAGA LKGGVGTASRTLPSGVTVGALAVVNSAGEVVDRATGLPWMTDLVEQFGLRPPPAEQIEAFAALPSPSNPLDNPLNTVIAV VATDAALSAAACRRVAVAAHDGLARSIRPAHTPVDGDTVFVLATGAVEVPPEADTPAAFSPETRLATEVGVAAADCLAHA VLGGVLAADSVAGIPSYRDVLPGALGR
Specific function: Unknown
COG id: COG3191
COG function: function code EQ; L-aminopeptidase/D-esterase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML1167 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016117 - InterPro: IPR005321 [H]
Pfam domain/function: PF03576 Peptidase_S58 [H]
EC number: NA
Molecular weight: Translated: 34527; Mature: 34527
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAITDVGGIRVGHHQRLDPDASLGAGWACGVTVVLTAPGTVGAVDCRGGAPGTRETDLL CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCC DPANTVRFVDAVLLAGGSAYGLAAADGVMRWLEEHDRGVAMDGGVVPIVPGAVIFDLPVG CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEECCCEEEECCCEEEEECCCC GWQCRPTAEFGYLACAAAARDDDAPAVGTVGAGVGARAGALKGGVGTASRTLPSGVTVGA CEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHH LAVVNSAGEVVDRATGLPWMTDLVEQFGLRPPPAEQIEAFAALPSPSNPLDNPLNTVIAV HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHH VATDAALSAAACRRVAVAAHDGLARSIRPAHTPVDGDTVFVLATGAVEVPPEADTPAAFS HHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEEEECCEECCCCCCCCCCCC PETRLATEVGVAAADCLAHAVLGGVLAADSVAGIPSYRDVLPGALGR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC >Mature Secondary Structure MNAITDVGGIRVGHHQRLDPDASLGAGWACGVTVVLTAPGTVGAVDCRGGAPGTRETDLL CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCC DPANTVRFVDAVLLAGGSAYGLAAADGVMRWLEEHDRGVAMDGGVVPIVPGAVIFDLPVG CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEECCCEEEECCCEEEEECCCC GWQCRPTAEFGYLACAAAARDDDAPAVGTVGAGVGARAGALKGGVGTASRTLPSGVTVGA CEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHH LAVVNSAGEVVDRATGLPWMTDLVEQFGLRPPPAEQIEAFAALPSPSNPLDNPLNTVIAV HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHH VATDAALSAAACRRVAVAAHDGLARSIRPAHTPVDGDTVFVLATGAVEVPPEADTPAAFS HHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEEEECCEECCCCCCCCCCCC PETRLATEVGVAAADCLAHAVLGGVLAADSVAGIPSYRDVLPGALGR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]