| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408485
Identifier: 41408485
GI number: 41408485
Start: 2682938
End: 2683768
Strand: Reverse
Name: 41408485
Synonym: MAP2387c
Alternate gene names: NA
Gene position: 2683768-2682938 (Counterclockwise)
Preceding gene: 41408486
Following gene: 41408484
Centisome position: 55.57
GC content: 64.5
Gene sequence:
>831_bases ATGAGAGCAATCGATTGTCTGGTCAACGTGCACTTCGGCGAGACCGAGAAGCAGCCGACGTGGATGCTCAAGGTGCGCGA CGACTACTTCAAGGGACCGGCGTCGATGTTCGCGCCCGTCGAGTTGTCCGAGCTGATCGACGAGATGGACGCCCAGGGGG TGCGCAAAGCCATCCTGATGGACAACCTGGCCAAGCCGTCGGTGACCGCGCGCAAGTTCGTCGAGGACAAGCCCGAGCGT TTCGCCCTGGCGATGGGTGGGGTGAAGCTGCTGCGGCCGATCCCGTCCCTGCGCGAGCTCGGCGCCGTCGTCGCCGACCT GCCCGTCGCGTATGCCGCTGTGGGACCGAGCTTTTGGGGGGATGGCCAGTATCCGCCCAGCGACGCCGTCTACTATCCGC TCTACACCAAGTGCGCCGAGCTCGAGCTGCCGCTGTGCGTCAACACCGGCATTCCCGGGCCCCCGATCCCGGGGGAGGTG CAGAATCCGATCCACCTCGACCGGGTGTGCGTGCGCTTCCCGGAACTCAAGCTGTGCATGATCCACGGCGCGGACCCTTG GTGGGACGTCGCCATCAGGCTGTTGCTCAAATACGCCAACCTGCGCCTGATGACGTCGGCCTGGTCGCCAAAGCGGTTGC CGGAGAGCCTGTTGCACTACATGCGCACCCGCGGGCAGGACAAGGTCATCTTCGCGTCCGACTGGCCGGTGCTCAAAATG CATCGCGTCGTCCCCGAGGCGGCCGAGTTGGATCTGCCCGCCGACGTGCTGGAAAACTACCTCTACAACAACGCGCACGA ATTCTTCTTCGGTGGCCACAAGGAAGGCTGA
Upstream 100 bases:
>100_bases TCGTCGCTGCGGTTCAGCGCTTGGGCAACGGTAAGGCGGATTACCGTTGGGCCAAACGTCACGCTGTCACCGAAGCTAGC GAGAAGGCGCCGATGTCGAC
Downstream 100 bases:
>100_bases GTATGGACCGCTATGAACTGCGCAGGCTCGACTACAGCCTGACCGACGATCACCAGGCGTTGCAGGCCGCCTACCGCGAT TTCTTCACGACGCACTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Amidase; Metal-Dependent Hydrolase; Antibiotic-Resistance Protein; TIM-Barrel Fold Metal-Dependent Hydrolase
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MRAIDCLVNVHFGETEKQPTWMLKVRDDYFKGPASMFAPVELSELIDEMDAQGVRKAILMDNLAKPSVTARKFVEDKPER FALAMGGVKLLRPIPSLRELGAVVADLPVAYAAVGPSFWGDGQYPPSDAVYYPLYTKCAELELPLCVNTGIPGPPIPGEV QNPIHLDRVCVRFPELKLCMIHGADPWWDVAIRLLLKYANLRLMTSAWSPKRLPESLLHYMRTRGQDKVIFASDWPVLKM HRVVPEAAELDLPADVLENYLYNNAHEFFFGGHKEG
Sequences:
>Translated_276_residues MRAIDCLVNVHFGETEKQPTWMLKVRDDYFKGPASMFAPVELSELIDEMDAQGVRKAILMDNLAKPSVTARKFVEDKPER FALAMGGVKLLRPIPSLRELGAVVADLPVAYAAVGPSFWGDGQYPPSDAVYYPLYTKCAELELPLCVNTGIPGPPIPGEV QNPIHLDRVCVRFPELKLCMIHGADPWWDVAIRLLLKYANLRLMTSAWSPKRLPESLLHYMRTRGQDKVIFASDWPVLKM HRVVPEAAELDLPADVLENYLYNNAHEFFFGGHKEG >Mature_276_residues MRAIDCLVNVHFGETEKQPTWMLKVRDDYFKGPASMFAPVELSELIDEMDAQGVRKAILMDNLAKPSVTARKFVEDKPER FALAMGGVKLLRPIPSLRELGAVVADLPVAYAAVGPSFWGDGQYPPSDAVYYPLYTKCAELELPLCVNTGIPGPPIPGEV QNPIHLDRVCVRFPELKLCMIHGADPWWDVAIRLLLKYANLRLMTSAWSPKRLPESLLHYMRTRGQDKVIFASDWPVLKM HRVVPEAAELDLPADVLENYLYNNAHEFFFGGHKEG
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31059; Mature: 31059
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAIDCLVNVHFGETEKQPTWMLKVRDDYFKGPASMFAPVELSELIDEMDAQGVRKAILM CCHHEEEEEEECCCCCCCCEEEEEECCHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHH DNLAKPSVTARKFVEDKPERFALAMGGVKLLRPIPSLRELGAVVADLPVAYAAVGPSFWG HCCCCCCHHHHHHHHCCCHHEEHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC DGQYPPSDAVYYPLYTKCAELELPLCVNTGIPGPPIPGEVQNPIHLDRVCVRFPELKLCM CCCCCCCCCEEEHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEE IHGADPWWDVAIRLLLKYANLRLMTSAWSPKRLPESLLHYMRTRGQDKVIFASDWPVLKM EECCCHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHH HRVVPEAAELDLPADVLENYLYNNAHEFFFGGHKEG HHHCCHHHHCCCCHHHHHHHHHCCCHHEECCCCCCC >Mature Secondary Structure MRAIDCLVNVHFGETEKQPTWMLKVRDDYFKGPASMFAPVELSELIDEMDAQGVRKAILM CCHHEEEEEEECCCCCCCCEEEEEECCHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHH DNLAKPSVTARKFVEDKPERFALAMGGVKLLRPIPSLRELGAVVADLPVAYAAVGPSFWG HCCCCCCHHHHHHHHCCCHHEEHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC DGQYPPSDAVYYPLYTKCAELELPLCVNTGIPGPPIPGEVQNPIHLDRVCVRFPELKLCM CCCCCCCCCEEEHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEE IHGADPWWDVAIRLLLKYANLRLMTSAWSPKRLPESLLHYMRTRGQDKVIFASDWPVLKM EECCCHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHH HRVVPEAAELDLPADVLENYLYNNAHEFFFGGHKEG HHHCCHHHHCCCCHHHHHHHHHCCCHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA