Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408485

Identifier: 41408485

GI number: 41408485

Start: 2682938

End: 2683768

Strand: Reverse

Name: 41408485

Synonym: MAP2387c

Alternate gene names: NA

Gene position: 2683768-2682938 (Counterclockwise)

Preceding gene: 41408486

Following gene: 41408484

Centisome position: 55.57

GC content: 64.5

Gene sequence:

>831_bases
ATGAGAGCAATCGATTGTCTGGTCAACGTGCACTTCGGCGAGACCGAGAAGCAGCCGACGTGGATGCTCAAGGTGCGCGA
CGACTACTTCAAGGGACCGGCGTCGATGTTCGCGCCCGTCGAGTTGTCCGAGCTGATCGACGAGATGGACGCCCAGGGGG
TGCGCAAAGCCATCCTGATGGACAACCTGGCCAAGCCGTCGGTGACCGCGCGCAAGTTCGTCGAGGACAAGCCCGAGCGT
TTCGCCCTGGCGATGGGTGGGGTGAAGCTGCTGCGGCCGATCCCGTCCCTGCGCGAGCTCGGCGCCGTCGTCGCCGACCT
GCCCGTCGCGTATGCCGCTGTGGGACCGAGCTTTTGGGGGGATGGCCAGTATCCGCCCAGCGACGCCGTCTACTATCCGC
TCTACACCAAGTGCGCCGAGCTCGAGCTGCCGCTGTGCGTCAACACCGGCATTCCCGGGCCCCCGATCCCGGGGGAGGTG
CAGAATCCGATCCACCTCGACCGGGTGTGCGTGCGCTTCCCGGAACTCAAGCTGTGCATGATCCACGGCGCGGACCCTTG
GTGGGACGTCGCCATCAGGCTGTTGCTCAAATACGCCAACCTGCGCCTGATGACGTCGGCCTGGTCGCCAAAGCGGTTGC
CGGAGAGCCTGTTGCACTACATGCGCACCCGCGGGCAGGACAAGGTCATCTTCGCGTCCGACTGGCCGGTGCTCAAAATG
CATCGCGTCGTCCCCGAGGCGGCCGAGTTGGATCTGCCCGCCGACGTGCTGGAAAACTACCTCTACAACAACGCGCACGA
ATTCTTCTTCGGTGGCCACAAGGAAGGCTGA

Upstream 100 bases:

>100_bases
TCGTCGCTGCGGTTCAGCGCTTGGGCAACGGTAAGGCGGATTACCGTTGGGCCAAACGTCACGCTGTCACCGAAGCTAGC
GAGAAGGCGCCGATGTCGAC

Downstream 100 bases:

>100_bases
GTATGGACCGCTATGAACTGCGCAGGCTCGACTACAGCCTGACCGACGATCACCAGGCGTTGCAGGCCGCCTACCGCGAT
TTCTTCACGACGCACTGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: Amidohydrolase Family Protein; Amidase; Metal-Dependent Hydrolase; Antibiotic-Resistance Protein; TIM-Barrel Fold Metal-Dependent Hydrolase

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MRAIDCLVNVHFGETEKQPTWMLKVRDDYFKGPASMFAPVELSELIDEMDAQGVRKAILMDNLAKPSVTARKFVEDKPER
FALAMGGVKLLRPIPSLRELGAVVADLPVAYAAVGPSFWGDGQYPPSDAVYYPLYTKCAELELPLCVNTGIPGPPIPGEV
QNPIHLDRVCVRFPELKLCMIHGADPWWDVAIRLLLKYANLRLMTSAWSPKRLPESLLHYMRTRGQDKVIFASDWPVLKM
HRVVPEAAELDLPADVLENYLYNNAHEFFFGGHKEG

Sequences:

>Translated_276_residues
MRAIDCLVNVHFGETEKQPTWMLKVRDDYFKGPASMFAPVELSELIDEMDAQGVRKAILMDNLAKPSVTARKFVEDKPER
FALAMGGVKLLRPIPSLRELGAVVADLPVAYAAVGPSFWGDGQYPPSDAVYYPLYTKCAELELPLCVNTGIPGPPIPGEV
QNPIHLDRVCVRFPELKLCMIHGADPWWDVAIRLLLKYANLRLMTSAWSPKRLPESLLHYMRTRGQDKVIFASDWPVLKM
HRVVPEAAELDLPADVLENYLYNNAHEFFFGGHKEG
>Mature_276_residues
MRAIDCLVNVHFGETEKQPTWMLKVRDDYFKGPASMFAPVELSELIDEMDAQGVRKAILMDNLAKPSVTARKFVEDKPER
FALAMGGVKLLRPIPSLRELGAVVADLPVAYAAVGPSFWGDGQYPPSDAVYYPLYTKCAELELPLCVNTGIPGPPIPGEV
QNPIHLDRVCVRFPELKLCMIHGADPWWDVAIRLLLKYANLRLMTSAWSPKRLPESLLHYMRTRGQDKVIFASDWPVLKM
HRVVPEAAELDLPADVLENYLYNNAHEFFFGGHKEG

Specific function: Unknown

COG id: COG2159

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31059; Mature: 31059

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAIDCLVNVHFGETEKQPTWMLKVRDDYFKGPASMFAPVELSELIDEMDAQGVRKAILM
CCHHEEEEEEECCCCCCCCEEEEEECCHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHH
DNLAKPSVTARKFVEDKPERFALAMGGVKLLRPIPSLRELGAVVADLPVAYAAVGPSFWG
HCCCCCCHHHHHHHHCCCHHEEHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC
DGQYPPSDAVYYPLYTKCAELELPLCVNTGIPGPPIPGEVQNPIHLDRVCVRFPELKLCM
CCCCCCCCCEEEHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEE
IHGADPWWDVAIRLLLKYANLRLMTSAWSPKRLPESLLHYMRTRGQDKVIFASDWPVLKM
EECCCHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHH
HRVVPEAAELDLPADVLENYLYNNAHEFFFGGHKEG
HHHCCHHHHCCCCHHHHHHHHHCCCHHEECCCCCCC
>Mature Secondary Structure
MRAIDCLVNVHFGETEKQPTWMLKVRDDYFKGPASMFAPVELSELIDEMDAQGVRKAILM
CCHHEEEEEEECCCCCCCCEEEEEECCHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHH
DNLAKPSVTARKFVEDKPERFALAMGGVKLLRPIPSLRELGAVVADLPVAYAAVGPSFWG
HCCCCCCHHHHHHHHCCCHHEEHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC
DGQYPPSDAVYYPLYTKCAELELPLCVNTGIPGPPIPGEVQNPIHLDRVCVRFPELKLCM
CCCCCCCCCEEEHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEE
IHGADPWWDVAIRLLLKYANLRLMTSAWSPKRLPESLLHYMRTRGQDKVIFASDWPVLKM
EECCCHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHH
HRVVPEAAELDLPADVLENYLYNNAHEFFFGGHKEG
HHHCCHHHHCCCCHHHHHHHHHCCCHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA