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The map label for this gene is mmgC [H]

Identifier: 41408483

GI number: 41408483

Start: 2680695

End: 2681888

Strand: Reverse

Name: mmgC [H]

Synonym: MAP2385c

Alternate gene names: 41408483

Gene position: 2681888-2680695 (Counterclockwise)

Preceding gene: 41408484

Following gene: 41408474

Centisome position: 55.53

GC content: 68.01

Gene sequence:

>1194_bases
GTGGACTTCTCACGTGTCACGCTGTCCGACGAGGACCAGCGATTCCTGGACGAGGCTCGCGAGTTCCTGCGCACCCATGT
GACCGACGAGGTCAGGCGCCGGGACCGGGAAACCGGCGACAACTTCGACGAGGGCGTGCACCTGGCGTTGGGTGCGGCCG
GCTATCTGGAACGCGAATGGAAGCCCGAGGCCGAGGGCGGTTTCAGCCGGGTGCAACGTCGCATCTGGGAGCTGGAGAAG
CGGCGCGCCCACGTGCCCTGGGTGACCTGGGGGACCACCGCCATGGTGGCCCGATCGGTGACCAAGTTCGGGTCCGAGGA
GTTACAGCGGGAAGTGCTGCCCGGCGTGTTCAGCGGGCACGTGCGGCTGTGCCTGGGCTATACCGAACCCGAGGGCGGAT
CCGATGTGGCCACCTGCAAGACCAGGGCGGTCCGGGACGGCAACGGCTGGATCATCAACGGCTCCAAGATGTTCACCACC
GGGGCGCACAACTGCCAATACGTTTTCCTGATCACCAACACCGACCCCGATGCGCCGAAGCACAAGAGCCTGACCATGTT
CCTGGTGCCGCTGGACTCGCCGGGCATCGACATCCAGGGCATCCGCACCGTCGACGGGGACCGCACCAACATCGTCTACT
ACAGCGACGTGCGGGTCGACGACAAGTATCGGCTGGGCGACGTGAACGCCGGCTGGACCGTTTTGCGCGAGCCGCTCAAC
GTCGAACACGGGGCGGTGGCGGCGGCCCCGGACGGGCTGCAGGACGTGTCGATCATGATGCACCAGGCCGGGTTCATGGC
CGACGCCCTGGACAAGGTCGCGGCCAAGGTCATGCAGCCAGACCCGCACGGGCGCAGGCTCATTGACGACTCGGCGATCG
CGTATCGGTTGGGCCGCAACGCCGCGCGGATGGAGGCGGCGCTGAGCGCGCCCAGCATCTACGGACGCGTCGCCCTCGCC
CAGACGATGCGCGACATCTCCCCGGACCTGATGGACATCCTGGGCACGGCGTCCGCGCTGCCGGTCGGCACCGACGGCGC
GGCCGATGACGGCGCCTCCGAATACGTCTTCCGGTTCGCCCCGCTGGTCGGCATCTACGGCGGCACCCTCGAGGTGTTCC
GCAACATGATCGCGCAGTACATGCTCGGCCTGGGCAAGCCGGCCTACGCGCCGGTGGCCCAGCGCGCCAGCTGA

Upstream 100 bases:

>100_bases
GCGGGCCCGCGGCTGGGCGCTGGCCGGCGGGGATCCCGGGGCCAGCGCGAAGTACATCGGCGAGCTCGTCGCCGCACGGG
AGAGCGGAAAGGGCGCATAG

Downstream 100 bases:

>100_bases
CGGCGCGCGCCGGCGGGCCTCCTGCGCGCCTCCTGCCGCGCCTCCTGCGCGCCGAACGTGCACTGGCCGCGAAATTCCGC
GCACTTTTTCGCGCTGGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MDFSRVTLSDEDQRFLDEAREFLRTHVTDEVRRRDRETGDNFDEGVHLALGAAGYLEREWKPEAEGGFSRVQRRIWELEK
RRAHVPWVTWGTTAMVARSVTKFGSEELQREVLPGVFSGHVRLCLGYTEPEGGSDVATCKTRAVRDGNGWIINGSKMFTT
GAHNCQYVFLITNTDPDAPKHKSLTMFLVPLDSPGIDIQGIRTVDGDRTNIVYYSDVRVDDKYRLGDVNAGWTVLREPLN
VEHGAVAAAPDGLQDVSIMMHQAGFMADALDKVAAKVMQPDPHGRRLIDDSAIAYRLGRNAARMEAALSAPSIYGRVALA
QTMRDISPDLMDILGTASALPVGTDGAADDGASEYVFRFAPLVGIYGGTLEVFRNMIAQYMLGLGKPAYAPVAQRAS

Sequences:

>Translated_397_residues
MDFSRVTLSDEDQRFLDEAREFLRTHVTDEVRRRDRETGDNFDEGVHLALGAAGYLEREWKPEAEGGFSRVQRRIWELEK
RRAHVPWVTWGTTAMVARSVTKFGSEELQREVLPGVFSGHVRLCLGYTEPEGGSDVATCKTRAVRDGNGWIINGSKMFTT
GAHNCQYVFLITNTDPDAPKHKSLTMFLVPLDSPGIDIQGIRTVDGDRTNIVYYSDVRVDDKYRLGDVNAGWTVLREPLN
VEHGAVAAAPDGLQDVSIMMHQAGFMADALDKVAAKVMQPDPHGRRLIDDSAIAYRLGRNAARMEAALSAPSIYGRVALA
QTMRDISPDLMDILGTASALPVGTDGAADDGASEYVFRFAPLVGIYGGTLEVFRNMIAQYMLGLGKPAYAPVAQRAS
>Mature_397_residues
MDFSRVTLSDEDQRFLDEAREFLRTHVTDEVRRRDRETGDNFDEGVHLALGAAGYLEREWKPEAEGGFSRVQRRIWELEK
RRAHVPWVTWGTTAMVARSVTKFGSEELQREVLPGVFSGHVRLCLGYTEPEGGSDVATCKTRAVRDGNGWIINGSKMFTT
GAHNCQYVFLITNTDPDAPKHKSLTMFLVPLDSPGIDIQGIRTVDGDRTNIVYYSDVRVDDKYRLGDVNAGWTVLREPLN
VEHGAVAAAPDGLQDVSIMMHQAGFMADALDKVAAKVMQPDPHGRRLIDDSAIAYRLGRNAARMEAALSAPSIYGRVALA
QTMRDISPDLMDILGTASALPVGTDGAADDGASEYVFRFAPLVGIYGGTLEVFRNMIAQYMLGLGKPAYAPVAQRAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI187960098, Length=350, Percent_Identity=26.2857142857143, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI4557231, Length=350, Percent_Identity=26.2857142857143, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI4501859, Length=308, Percent_Identity=25, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI4557233, Length=406, Percent_Identity=23.3990147783251, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI226958412, Length=256, Percent_Identity=26.171875, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI4501857, Length=307, Percent_Identity=24.7557003257329, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI226958414, Length=168, Percent_Identity=29.1666666666667, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI211971008, Length=110, Percent_Identity=34.5454545454545, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI48976061, Length=110, Percent_Identity=34.5454545454545, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI87081958, Length=264, Percent_Identity=26.5151515151515, Blast_Score=65, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17569725, Length=293, Percent_Identity=27.3037542662116, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17508101, Length=394, Percent_Identity=24.6192893401015, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17534899, Length=302, Percent_Identity=25.8278145695364, Blast_Score=85, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17506239, Length=321, Percent_Identity=26.1682242990654, Blast_Score=85, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17505929, Length=164, Percent_Identity=31.0975609756098, Blast_Score=81, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17551932, Length=164, Percent_Identity=29.8780487804878, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17538396, Length=263, Percent_Identity=25.0950570342205, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI32563615, Length=243, Percent_Identity=28.3950617283951, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71990804, Length=256, Percent_Identity=24.21875, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17570075, Length=270, Percent_Identity=27.037037037037, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71982178, Length=292, Percent_Identity=23.6301369863014, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24660351, Length=291, Percent_Identity=27.4914089347079, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI21355753, Length=262, Percent_Identity=29.0076335877863, Blast_Score=75, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43727; Mature: 43727

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSRVTLSDEDQRFLDEAREFLRTHVTDEVRRRDRETGDNFDEGVHLALGAAGYLEREW
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCEEEEECCCHHHCCCC
KPEAEGGFSRVQRRIWELEKRRAHVPWVTWGTTAMVARSVTKFGSEELQREVLPGVFSGH
CCCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHCHHHHHHHHCCHHHCCC
VRLCLGYTEPEGGSDVATCKTRAVRDGNGWIINGSKMFTTGAHNCQYVFLITNTDPDAPK
EEEEEEECCCCCCCCHHHHHHHEEECCCCEEEECCEEEEECCCCEEEEEEEECCCCCCCC
HKSLTMFLVPLDSPGIDIQGIRTVDGDRTNIVYYSDVRVDDKYRLGDVNAGWTVLREPLN
CCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEECEEECCCEEECCCCCCHHHHHCCCC
VEHGAVAAAPDGLQDVSIMMHQAGFMADALDKVAAKVMQPDPHGRRLIDDSAIAYRLGRN
CCCCCEEECCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHCCC
AARMEAALSAPSIYGRVALAQTMRDISPDLMDILGTASALPVGTDGAADDGASEYVFRFA
HHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
PLVGIYGGTLEVFRNMIAQYMLGLGKPAYAPVAQRAS
HHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCC
>Mature Secondary Structure
MDFSRVTLSDEDQRFLDEAREFLRTHVTDEVRRRDRETGDNFDEGVHLALGAAGYLEREW
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCEEEEECCCHHHCCCC
KPEAEGGFSRVQRRIWELEKRRAHVPWVTWGTTAMVARSVTKFGSEELQREVLPGVFSGH
CCCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHCHHHHHHHHCCHHHCCC
VRLCLGYTEPEGGSDVATCKTRAVRDGNGWIINGSKMFTTGAHNCQYVFLITNTDPDAPK
EEEEEEECCCCCCCCHHHHHHHEEECCCCEEEECCEEEEECCCCEEEEEEEECCCCCCCC
HKSLTMFLVPLDSPGIDIQGIRTVDGDRTNIVYYSDVRVDDKYRLGDVNAGWTVLREPLN
CCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEECEEECCCEEECCCCCCHHHHHCCCC
VEHGAVAAAPDGLQDVSIMMHQAGFMADALDKVAAKVMQPDPHGRRLIDDSAIAYRLGRN
CCCCCEEECCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHCCC
AARMEAALSAPSIYGRVALAQTMRDISPDLMDILGTASALPVGTDGAADDGASEYVFRFA
HHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
PLVGIYGGTLEVFRNMIAQYMLGLGKPAYAPVAQRAS
HHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]