| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408458
Identifier: 41408458
GI number: 41408458
Start: 2651582
End: 2652115
Strand: Reverse
Name: 41408458
Synonym: MAP2360c
Alternate gene names: NA
Gene position: 2652115-2651582 (Counterclockwise)
Preceding gene: 41408460
Following gene: 41408457
Centisome position: 54.91
GC content: 67.04
Gene sequence:
>534_bases GTGACGGTCGGGTATGTCGCTGGCGTGGCCGATCCGCTGGCACAAAGCACGAAGGGCGCGAAGGGATTGCGGCGGCGCCT GCTGTCGTCGCGGGTACTCACCCTCAACGGCTGGGTGGCGTTCAACCTGCCGCGCACGGTGACCGCGCTGGGTGGCGCGC TGCTGACCGGACTGGTGCTGGTGCACATCTACGTGCTGACCACCGAACCGGGTCTGCCGCGATATTTCGCTGCCTACGTG CTGGGGCTGAGCGCGGCCTGCGCGCTGGCGGCCGGCGCCATGGTGTTCGCGCTCAAACCGATTGTGCCCCAGGCTGGTTG GTATTTCGGCAGCCTGGTCTGCTCGGCGTTCCTTTGCGCGTATCTGGTAACCCGGTGGATCCAGCTGCCCGGGCTGATCG CGGTGACCGCCCGATGGGACTTCGCGCCGGGAACGTTGGGCATCGCGTTCGCGGGGGCCTTTCTCGCGGTGCATACCACG GTGTTGTCGGGCATCAACGTGGCCTATCCGCAGCGTCAGCAGTGGTACGACTGA
Upstream 100 bases:
>100_bases TTGATACCGGCCCGTTAATCGTCGCCCGATTCGTCGACGCAGCGCAATTGACGCCGCCGAAAAACGCTGCTGTGGACTCC CTGAAAGCGCGTTTGCGGAT
Downstream 100 bases:
>100_bases CGGAGCGCAGGCGATGACGGTATTGGACTATCCGGTATGGCTGCGCGTCGATCATTGGCTCAACGTGCTCTTTGTGACGC TGATAATTCGCAGCGGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTVGYVAGVADPLAQSTKGAKGLRRRLLSSRVLTLNGWVAFNLPRTVTALGGALLTGLVLVHIYVLTTEPGLPRYFAAYV LGLSAACALAAGAMVFALKPIVPQAGWYFGSLVCSAFLCAYLVTRWIQLPGLIAVTARWDFAPGTLGIAFAGAFLAVHTT VLSGINVAYPQRQQWYD
Sequences:
>Translated_177_residues MTVGYVAGVADPLAQSTKGAKGLRRRLLSSRVLTLNGWVAFNLPRTVTALGGALLTGLVLVHIYVLTTEPGLPRYFAAYV LGLSAACALAAGAMVFALKPIVPQAGWYFGSLVCSAFLCAYLVTRWIQLPGLIAVTARWDFAPGTLGIAFAGAFLAVHTT VLSGINVAYPQRQQWYD >Mature_176_residues TVGYVAGVADPLAQSTKGAKGLRRRLLSSRVLTLNGWVAFNLPRTVTALGGALLTGLVLVHIYVLTTEPGLPRYFAAYVL GLSAACALAAGAMVFALKPIVPQAGWYFGSLVCSAFLCAYLVTRWIQLPGLIAVTARWDFAPGTLGIAFAGAFLAVHTTV LSGINVAYPQRQQWYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18803; Mature: 18672
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVGYVAGVADPLAQSTKGAKGLRRRLLSSRVLTLNGWVAFNLPRTVTALGGALLTGLVL CCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECEEEEECCHHHHHHHHHHHHHHHH VHIYVLTTEPGLPRYFAAYVLGLSAACALAAGAMVFALKPIVPQAGWYFGSLVCSAFLCA HHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH YLVTRWIQLPGLIAVTARWDFAPGTLGIAFAGAFLAVHTTVLSGINVAYPQRQQWYD HHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCC >Mature Secondary Structure TVGYVAGVADPLAQSTKGAKGLRRRLLSSRVLTLNGWVAFNLPRTVTALGGALLTGLVL CCCHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECEEEEECCHHHHHHHHHHHHHHHH VHIYVLTTEPGLPRYFAAYVLGLSAACALAAGAMVFALKPIVPQAGWYFGSLVCSAFLCA HHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH YLVTRWIQLPGLIAVTARWDFAPGTLGIAFAGAFLAVHTTVLSGINVAYPQRQQWYD HHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA