| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408456
Identifier: 41408456
GI number: 41408456
Start: 2649774
End: 2650076
Strand: Reverse
Name: 41408456
Synonym: MAP2358c
Alternate gene names: NA
Gene position: 2650076-2649774 (Counterclockwise)
Preceding gene: 41408457
Following gene: 41408447
Centisome position: 54.87
GC content: 68.65
Gene sequence:
>303_bases ATGTCCGACGCGGCGGCCAACGGCATCGGGGTGCGGCCCGAGCTGATCAGCTTGGACGCGGCGGCCGTCCATCGGGTGCG CGAGCAGGTCGCGGCCAAGGGTGGGCACTGCGAGGCGTGCGGCGCAACGGATTTCGTGGTCGGTGACGTCCTCTACCTGG GTTTCCTGTTTCTGAACGAGGAGGCCGACGCCTACCTGGTGGCGTTGACCTGTGCCAATCCGCAATGCCCCGCGTCGCGG ACCGCGATCAGGCTGTCCGAGAACGAGTTTTTGACCAGCGGCCGCGGCGCCGCCGGCCGTTAG
Upstream 100 bases:
>100_bases AACCAGATCGAGTTCGTCGACGACTTCGCCGGGATCGGCATGGGCACCGGCGGTTGGCGTGAGGACCGCGTGTACTACGA CAAGGACGTGGAGATCTGAG
Downstream 100 bases:
>100_bases CCGAGGCGTCCGCCGCTCCCGGGAGTCGGGGCTGGGCCAAGCCGAATCTGTCGATCAGGGGTGACAATTCGCGCAGCCGA TCGCACAACGCTTGGAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MSDAAANGIGVRPELISLDAAAVHRVREQVAAKGGHCEACGATDFVVGDVLYLGFLFLNEEADAYLVALTCANPQCPASR TAIRLSENEFLTSGRGAAGR
Sequences:
>Translated_100_residues MSDAAANGIGVRPELISLDAAAVHRVREQVAAKGGHCEACGATDFVVGDVLYLGFLFLNEEADAYLVALTCANPQCPASR TAIRLSENEFLTSGRGAAGR >Mature_99_residues SDAAANGIGVRPELISLDAAAVHRVREQVAAKGGHCEACGATDFVVGDVLYLGFLFLNEEADAYLVALTCANPQCPASRT AIRLSENEFLTSGRGAAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10410; Mature: 10279
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAAANGIGVRPELISLDAAAVHRVREQVAAKGGHCEACGATDFVVGDVLYLGFLFLNE CCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC EADAYLVALTCANPQCPASRTAIRLSENEFLTSGRGAAGR CCCEEEEEEEECCCCCCCCCEEEEECCCCEECCCCCCCCC >Mature Secondary Structure SDAAANGIGVRPELISLDAAAVHRVREQVAAKGGHCEACGATDFVVGDVLYLGFLFLNE CCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC EADAYLVALTCANPQCPASRTAIRLSENEFLTSGRGAAGR CCCEEEEEEEECCCCCCCCCEEEEECCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA