| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is plsB2
Identifier: 41408396
GI number: 41408396
Start: 2574584
End: 2576938
Strand: Reverse
Name: plsB2
Synonym: MAP2298c
Alternate gene names: 41408396
Gene position: 2576938-2574584 (Counterclockwise)
Preceding gene: 41408397
Following gene: 41408395
Centisome position: 53.36
GC content: 68.32
Gene sequence:
>2355_bases GTGACCGAACCGGCGGCAGACGCCAGCGCGCTGCTCACCGAACAAGACTCGCTGGTGTTGGCGTCCATGGCCTCTGCGGT CGAGGTGGACCTGGTCACCGTCTGGCTGGAGCAGCAGCGCGCCGGCCACCCGGGTGCGCAATTCGAGCTGGTCAAACTGC CCGCGCTGGACGCGCCGCCGGCGGAGATGACCGCGCTGGCCGAGCGGCTCGAGGCCGGCGACGACCGCTCGGTGGTGCCG GTGCGGGTGTTCTGGCTGCCGCCACCGGATCGCGGGCGAATCGCCAAGCTGGCCGGGCTGGTTCCCGGCCGTGACCCCTA CCACCCCAACCAGCGTCTGCAAGCACAGATCCTGCGCCGCGCCCCGCAGCGGGCCCGGGTGGTGGCCGGTGAGGCGGCCA CCGTCTCCGAACTGCGCCGCCAGTGGCGCGACACCACCGTCGGCGACGACCAGCGCGACTTCGCCCAATTCGTCATCCGC CGCGCCATCTTGGCGATGGAGCGGGTCGAATACCGGATACTGGGACCGCAATACAAGTCGCCGCGGCTGGTGAAGCCGGA GATCTTGGCGTCCAACAGGTTTCGAGCCGGGCTGGCCAAGATCCCGGGCGCCACCGTCGAGGAAGCCGGGAAGATGCTCG ACGAGCTCGCCACCGGGTGGAGCCGGGCATCGGTCGATTTGGTCTCGGTGCTCGGCCGGTTGATCAGCCGCGGCTTCGAC CGCGAGATCGACTACGACGAATACCAGGTGGCGGCGATGCGCACCGCCCTGGAAGCCCACCCCGCGGTGCTGCTGTTCTC GCACCGGTCCTACATCGACGGCGCGGTGGTGCCGGTGGCCATGCAGGAGAACCGGTTACCGCCGGTGCACGTCTTCGCCG GCATCAACCTGTCGTTCGGGGCGATGGGGCCGCTGCTGCGGCGCTCCGGTGTCATCTTCATCCGCCGCAACATCGGCAAC GACCAGCTCTACAAGTACGTCCTGCGAGAATACGTCGGCTACATCGTCGAGAAGCGGTTCAACCTGAGCTGGTCCATCGA GGGCACCCGCTCGCGCACCGGCAAGATGCTGCCGCCCAAACTCGGCCTGCTGTCCTACGTTGCCGACGCCTACCTGGATG GCCGCAGCGAAGACATTCTGCTGCAACCGGTTTCGATCAGCTTCGATCAGCTGCACGAGACCGCGGAGTACGCCGCCTAC GCCCGCGGTGGTGAGAAGACGCCCGAAGGCGTGGGCTGGCTGTACAACTTCATCCGGGCGCAGGGCGAACGCAACTACGG CAAGATCTACGTCCGATTCCCCGAGGCCGTGTCGATGCGCCAATACCTGGGTGCGCCGCACGGCCCGCTGGCGCAGGACC CCGACGCCAAACGCCTTGCGCTGCAGAAGATGTCCTTCGAAGTCGCCTGGCGGATCCTGCAGGCGACGCCGGTGACGGCG ACCGGGCTGGTGTGCGCGCTGCTGCTGACCACCCGCGGCGCGGCGTTGACCCTGCGCCAACTGCATCACACCCTGCAGGA CTCGCTGGATTACCTGGAACGCAAACAGAATCCGATGTCGACCAGTGCCCTGCGGCTGCGCTCGCCGGACGGTGTGCGGG CGGCGGTGGACGCGCTGTCCAACGGGCACCCCGTCACTCGGATCGACGGCGGCCGGGAGCCGGTGTGGCAGATCACGCCC GAACACCAGCACGCCGCGGCGTTCTACCGCAACTCGGTGATCCATGCCTTTCTGGAGACCTCCATCGTCGAACTGGCGCT GGCACACGCCAAGCACGTCGACGGCGACCGCATGCAGGCCTTCTGGGACCAGGCGATGCGGCTGCGCGATCTGCTCAAGT TCGACTTCTACTTCGCGGACTCGGCGACGTTCCGGGACAACATCGCCGAAGAGATGGCCTGGCACGACAATTGGGAGGAC CACGTCGCCGCCGGCGGCGACGAGATCGACGCGCTGCTGTTCGCCAAGCGGCCGCTGATGGCCGAAGCGATGCTGCGGGT GTTCTTCGAGGCCTACGAGATCGTCGCCGACGTGCTGCGCGACGCCCCGGCGGACATCGGGAACAAGGAACTGACGCGGC TGGCCCTGGGGGTGGGCCGGCAGTATGTGGCACAAACCCGGATCCGCAGCAGCGAATCGGTGTCGACCCTGCTGTTCGCC ACCGCGCGTCAGGTCGTCGAGGACCAGGACCTGATAGCGGCCGCGCCTGACCTGGCCGAACGACGGGACGCGTTCCTGCG CGAGCTGCGCGCCATCCTGCGGGACTTCGACTACGTCGGCCGCGTCGCGCGCGAGCAGTTCGTGGCCCGGGAGGCCAAGG CGCGCCGGGAGAGCCTGGACAGTCGACCGGGATAG
Upstream 100 bases:
>100_bases ACCCGGAAGTCGCCGCGTCGCACAACGGGGAAGTGAGCCCCTCCCGCGCGGCCGACCCGATCGGCGCCGAACCACCCGAA GCGCCGCCCCGAGGGCGTCC
Downstream 100 bases:
>100_bases CCGACCGCCCCGCCAATACCCTGGGGGGATGACCGTCGCCCCGCCGGCCGGCACCGCCTCGACCGAGGCGGTCCCGCAGC ACCGCACGCTGGTGTGGCCG
Product: glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: GPAT [H]
Number of amino acids: Translated: 784; Mature: 783
Protein sequence:
>784_residues MTEPAADASALLTEQDSLVLASMASAVEVDLVTVWLEQQRAGHPGAQFELVKLPALDAPPAEMTALAERLEAGDDRSVVP VRVFWLPPPDRGRIAKLAGLVPGRDPYHPNQRLQAQILRRAPQRARVVAGEAATVSELRRQWRDTTVGDDQRDFAQFVIR RAILAMERVEYRILGPQYKSPRLVKPEILASNRFRAGLAKIPGATVEEAGKMLDELATGWSRASVDLVSVLGRLISRGFD REIDYDEYQVAAMRTALEAHPAVLLFSHRSYIDGAVVPVAMQENRLPPVHVFAGINLSFGAMGPLLRRSGVIFIRRNIGN DQLYKYVLREYVGYIVEKRFNLSWSIEGTRSRTGKMLPPKLGLLSYVADAYLDGRSEDILLQPVSISFDQLHETAEYAAY ARGGEKTPEGVGWLYNFIRAQGERNYGKIYVRFPEAVSMRQYLGAPHGPLAQDPDAKRLALQKMSFEVAWRILQATPVTA TGLVCALLLTTRGAALTLRQLHHTLQDSLDYLERKQNPMSTSALRLRSPDGVRAAVDALSNGHPVTRIDGGREPVWQITP EHQHAAAFYRNSVIHAFLETSIVELALAHAKHVDGDRMQAFWDQAMRLRDLLKFDFYFADSATFRDNIAEEMAWHDNWED HVAAGGDEIDALLFAKRPLMAEAMLRVFFEAYEIVADVLRDAPADIGNKELTRLALGVGRQYVAQTRIRSSESVSTLLFA TARQVVEDQDLIAAAPDLAERRDAFLRELRAILRDFDYVGRVAREQFVAREAKARRESLDSRPG
Sequences:
>Translated_784_residues MTEPAADASALLTEQDSLVLASMASAVEVDLVTVWLEQQRAGHPGAQFELVKLPALDAPPAEMTALAERLEAGDDRSVVP VRVFWLPPPDRGRIAKLAGLVPGRDPYHPNQRLQAQILRRAPQRARVVAGEAATVSELRRQWRDTTVGDDQRDFAQFVIR RAILAMERVEYRILGPQYKSPRLVKPEILASNRFRAGLAKIPGATVEEAGKMLDELATGWSRASVDLVSVLGRLISRGFD REIDYDEYQVAAMRTALEAHPAVLLFSHRSYIDGAVVPVAMQENRLPPVHVFAGINLSFGAMGPLLRRSGVIFIRRNIGN DQLYKYVLREYVGYIVEKRFNLSWSIEGTRSRTGKMLPPKLGLLSYVADAYLDGRSEDILLQPVSISFDQLHETAEYAAY ARGGEKTPEGVGWLYNFIRAQGERNYGKIYVRFPEAVSMRQYLGAPHGPLAQDPDAKRLALQKMSFEVAWRILQATPVTA TGLVCALLLTTRGAALTLRQLHHTLQDSLDYLERKQNPMSTSALRLRSPDGVRAAVDALSNGHPVTRIDGGREPVWQITP EHQHAAAFYRNSVIHAFLETSIVELALAHAKHVDGDRMQAFWDQAMRLRDLLKFDFYFADSATFRDNIAEEMAWHDNWED HVAAGGDEIDALLFAKRPLMAEAMLRVFFEAYEIVADVLRDAPADIGNKELTRLALGVGRQYVAQTRIRSSESVSTLLFA TARQVVEDQDLIAAAPDLAERRDAFLRELRAILRDFDYVGRVAREQFVAREAKARRESLDSRPG >Mature_783_residues TEPAADASALLTEQDSLVLASMASAVEVDLVTVWLEQQRAGHPGAQFELVKLPALDAPPAEMTALAERLEAGDDRSVVPV RVFWLPPPDRGRIAKLAGLVPGRDPYHPNQRLQAQILRRAPQRARVVAGEAATVSELRRQWRDTTVGDDQRDFAQFVIRR AILAMERVEYRILGPQYKSPRLVKPEILASNRFRAGLAKIPGATVEEAGKMLDELATGWSRASVDLVSVLGRLISRGFDR EIDYDEYQVAAMRTALEAHPAVLLFSHRSYIDGAVVPVAMQENRLPPVHVFAGINLSFGAMGPLLRRSGVIFIRRNIGND QLYKYVLREYVGYIVEKRFNLSWSIEGTRSRTGKMLPPKLGLLSYVADAYLDGRSEDILLQPVSISFDQLHETAEYAAYA RGGEKTPEGVGWLYNFIRAQGERNYGKIYVRFPEAVSMRQYLGAPHGPLAQDPDAKRLALQKMSFEVAWRILQATPVTAT GLVCALLLTTRGAALTLRQLHHTLQDSLDYLERKQNPMSTSALRLRSPDGVRAAVDALSNGHPVTRIDGGREPVWQITPE HQHAAAFYRNSVIHAFLETSIVELALAHAKHVDGDRMQAFWDQAMRLRDLLKFDFYFADSATFRDNIAEEMAWHDNWEDH VAAGGDEIDALLFAKRPLMAEAMLRVFFEAYEIVADVLRDAPADIGNKELTRLALGVGRQYVAQTRIRSSESVSTLLFAT ARQVVEDQDLIAAAPDLAERRDAFLRELRAILRDFDYVGRVAREQFVAREAKARRESLDSRPG
Specific function: De novo phospholipid biosynthesis; first step. [C]
COG id: COG2937
COG function: function code I; Glycerol-3-phosphate O-acyltransferase
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPAT/DAPAT family [H]
Homologues:
Organism=Homo sapiens, GI7657134, Length=539, Percent_Identity=25.7884972170686, Blast_Score=130, Evalue=4e-30, Organism=Homo sapiens, GI190358539, Length=429, Percent_Identity=24.009324009324, Blast_Score=91, Evalue=4e-18, Organism=Escherichia coli, GI87082362, Length=403, Percent_Identity=28.7841191066998, Blast_Score=145, Evalue=8e-36, Organism=Caenorhabditis elegans, GI25147672, Length=338, Percent_Identity=26.0355029585799, Blast_Score=113, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71988723, Length=503, Percent_Identity=22.4652087475149, Blast_Score=108, Evalue=8e-24, Organism=Caenorhabditis elegans, GI71988728, Length=415, Percent_Identity=23.1325301204819, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI17864692, Length=343, Percent_Identity=26.530612244898, Blast_Score=115, Evalue=1e-25, Organism=Drosophila melanogaster, GI24650754, Length=376, Percent_Identity=28.1914893617021, Blast_Score=109, Evalue=7e-24, Organism=Drosophila melanogaster, GI21357731, Length=376, Percent_Identity=28.1914893617021, Blast_Score=109, Evalue=9e-24, Organism=Drosophila melanogaster, GI24650752, Length=376, Percent_Identity=28.1914893617021, Blast_Score=108, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR022284 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.15 [H]
Molecular weight: Translated: 87717; Mature: 87586
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPAADASALLTEQDSLVLASMASAVEVDLVTVWLEQQRAGHPGAQFELVKLPALDAPP CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCH AEMTALAERLEAGDDRSVVPVRVFWLPPPDRGRIAKLAGLVPGRDPYHPNQRLQAQILRR HHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHH APQRARVVAGEAATVSELRRQWRDTTVGDDQRDFAQFVIRRAILAMERVEYRILGPQYKS CCHHHHEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCC PRLVKPEILASNRFRAGLAKIPGATVEEAGKMLDELATGWSRASVDLVSVLGRLISRGFD CCCCCHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC REIDYDEYQVAAMRTALEAHPAVLLFSHRSYIDGAVVPVAMQENRLPPVHVFAGINLSFG CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCCHH AMGPLLRRSGVIFIRRNIGNDQLYKYVLREYVGYIVEKRFNLSWSIEGTRSRTGKMLPPK HHCHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCH LGLLSYVADAYLDGRSEDILLQPVSISFDQLHETAEYAAYARGGEKTPEGVGWLYNFIRA HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH QGERNYGKIYVRFPEAVSMRQYLGAPHGPLAQDPDAKRLALQKMSFEVAWRILQATPVTA CCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH TGLVCALLLTTRGAALTLRQLHHTLQDSLDYLERKQNPMSTSALRLRSPDGVRAAVDALS HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHC NGHPVTRIDGGREPVWQITPEHQHAAAFYRNSVIHAFLETSIVELALAHAKHVDGDRMQA CCCCEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FWDQAMRLRDLLKFDFYFADSATFRDNIAEEMAWHDNWEDHVAAGGDEIDALLFAKRPLM HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHCCCHH AEAMLRVFFEAYEIVADVLRDAPADIGNKELTRLALGVGRQYVAQTRIRSSESVSTLLFA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TARQVVEDQDLIAAAPDLAERRDAFLRELRAILRDFDYVGRVAREQFVAREAKARRESLD HHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SRPG CCCC >Mature Secondary Structure TEPAADASALLTEQDSLVLASMASAVEVDLVTVWLEQQRAGHPGAQFELVKLPALDAPP CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCH AEMTALAERLEAGDDRSVVPVRVFWLPPPDRGRIAKLAGLVPGRDPYHPNQRLQAQILRR HHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHH APQRARVVAGEAATVSELRRQWRDTTVGDDQRDFAQFVIRRAILAMERVEYRILGPQYKS CCHHHHEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCC PRLVKPEILASNRFRAGLAKIPGATVEEAGKMLDELATGWSRASVDLVSVLGRLISRGFD CCCCCHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC REIDYDEYQVAAMRTALEAHPAVLLFSHRSYIDGAVVPVAMQENRLPPVHVFAGINLSFG CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCCHH AMGPLLRRSGVIFIRRNIGNDQLYKYVLREYVGYIVEKRFNLSWSIEGTRSRTGKMLPPK HHCHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCH LGLLSYVADAYLDGRSEDILLQPVSISFDQLHETAEYAAYARGGEKTPEGVGWLYNFIRA HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH QGERNYGKIYVRFPEAVSMRQYLGAPHGPLAQDPDAKRLALQKMSFEVAWRILQATPVTA CCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH TGLVCALLLTTRGAALTLRQLHHTLQDSLDYLERKQNPMSTSALRLRSPDGVRAAVDALS HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHC NGHPVTRIDGGREPVWQITPEHQHAAAFYRNSVIHAFLETSIVELALAHAKHVDGDRMQA CCCCEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FWDQAMRLRDLLKFDFYFADSATFRDNIAEEMAWHDNWEDHVAAGGDEIDALLFAKRPLM HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHCCCHH AEAMLRVFFEAYEIVADVLRDAPADIGNKELTRLALGVGRQYVAQTRIRSSESVSTLLFA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TARQVVEDQDLIAAAPDLAERRDAFLRELRAILRDFDYVGRVAREQFVAREAKARRESLD HHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SRPG CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA