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The map label for this gene is ssb [H]

Identifier: 41408394

GI number: 41408394

Start: 2571804

End: 2572286

Strand: Reverse

Name: ssb [H]

Synonym: MAP2296c

Alternate gene names: 41408394

Gene position: 2572286-2571804 (Counterclockwise)

Preceding gene: 41408395

Following gene: 41408393

Centisome position: 53.26

GC content: 70.6

Gene sequence:

>483_bases
ATGTTCGAAACCCCGCTGACCGTGGTCGGCCACATCGTCAACAACCCCGAACGACGCCAGGTCGGCGCCCAGGAGGTCAT
CAAGTTTCGCGTCGCGAGCAATTCGCGCCGCCGCACCGCCGACGGCGGCTGGGAGCCGGGCAACTCGCTGTTCATCAACG
TCAATTGCTGGGGCCGGCTGGTCACCGGGGTGGGCGCCGCGCTGGGCAAGGGCGCACCGGTGATCGTGGTGGGCCACGTC
TACACCAGCGAATACGAGGACCGCGACGGCAACCGTCGCTCGTCGCTGGAGATGCGGGCAACCTCCGTCGGGCCCGATGT
GTCCCGCGCGATCGTGCGCATCGAGAAGCCCGGCTACACCGGTCCCAGCACCGACGAGGCCACCCCGGCCGCGGCGGAGG
CGGCCGACGCCGCTGGTGAGGACGCCGATCGCGGCGACACCGTCGAGCCCGTCGACACGGGCCCGGTGCCACTGTCCGCT
TAG

Upstream 100 bases:

>100_bases
CGCCTCGTCGGTGCCGCCGGGCTTACTGGCGGCCATGAGAACGGTGACGCGCTCAGGAGCCCGTCGCCACGCCAGAGAAA
CACCAGGAAGGGATCAGCCC

Downstream 100 bases:

>100_bases
CTGCGGGATCCGCCCACCGCGCGATGCCTAGGATGGTCCGCGAGATCACTCGCTAAATCAGAAAGGCACAACCGCGGCAT
GGCTGAGTTCATCTACACGA

Product: hypothetical protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MFETPLTVVGHIVNNPERRQVGAQEVIKFRVASNSRRRTADGGWEPGNSLFINVNCWGRLVTGVGAALGKGAPVIVVGHV
YTSEYEDRDGNRRSSLEMRATSVGPDVSRAIVRIEKPGYTGPSTDEATPAAAEAADAAGEDADRGDTVEPVDTGPVPLSA

Sequences:

>Translated_160_residues
MFETPLTVVGHIVNNPERRQVGAQEVIKFRVASNSRRRTADGGWEPGNSLFINVNCWGRLVTGVGAALGKGAPVIVVGHV
YTSEYEDRDGNRRSSLEMRATSVGPDVSRAIVRIEKPGYTGPSTDEATPAAAEAADAAGEDADRGDTVEPVDTGPVPLSA
>Mature_160_residues
MFETPLTVVGHIVNNPERRQVGAQEVIKFRVASNSRRRTADGGWEPGNSLFINVNCWGRLVTGVGAALGKGAPVIVVGHV
YTSEYEDRDGNRRSSLEMRATSVGPDVSRAIVRIEKPGYTGPSTDEATPAAAEAADAAGEDADRGDTVEPVDTGPVPLSA

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 16887; Mature: 16887

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFETPLTVVGHIVNNPERRQVGAQEVIKFRVASNSRRRTADGGWEPGNSLFINVNCWGRL
CCCCHHHHHHHHHCCHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEHHHHH
VTGVGAALGKGAPVIVVGHVYTSEYEDRDGNRRSSLEMRATSVGPDVSRAIVRIEKPGYT
HHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCC
GPSTDEATPAAAEAADAAGEDADRGDTVEPVDTGPVPLSA
CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFETPLTVVGHIVNNPERRQVGAQEVIKFRVASNSRRRTADGGWEPGNSLFINVNCWGRL
CCCCHHHHHHHHHCCHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEHHHHH
VTGVGAALGKGAPVIVVGHVYTSEYEDRDGNRRSSLEMRATSVGPDVSRAIVRIEKPGYT
HHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCC
GPSTDEATPAAAEAADAAGEDADRGDTVEPVDTGPVPLSA
CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]