Click here to switch to the map view.

The map label for this gene is 41408388

Identifier: 41408388

GI number: 41408388

Start: 2560102

End: 2560749

Strand: Reverse

Name: 41408388

Synonym: MAP2290c

Alternate gene names: NA

Gene position: 2560749-2560102 (Counterclockwise)

Preceding gene: 41408391

Following gene: 41408387

Centisome position: 53.02

GC content: 70.68

Gene sequence:

>648_bases
ATGGCGCAGGGCAAGAAGCGCCGCCGCCACCGCAGCCAGGTGGCCGCGGCAGGGTTGACCGGGCCCCCGACCGCGTCCTC
ACTGCACAGTGTTGAAACCCACCCGCCCACCCGCCCGGACAGCACGTCCATCTGGAGTCGCCGGCGGGTGCTGCTGCTGA
ATTCCACCTACGAGCCGCTGACCGCGCTGCCGATGCGGCGCGCCATCGTCATGGTGATCTGCGGAAAGGCCGACGTGGTG
CATCACGATCCGGCGGGCCCGGTCATCCACTCGGCGACCAGCTCGATCGTGATGCCGTCGGTGATCCAGCTGCGCAGCTA
CGTCCGGGTGCCCTACCGGGCGCGGGTCCCGATGACCCGCGCCGCGCTGATGCACCGCGACCGGTTCTGCTGCGCCTACT
GCGGGGCCAAGGCCGACACCGTCGACCACGTGGTGCCGCGCAGCCGCGGGGGTGATCACTCCTGGGAGAACTGCGTCGCC
TGCTGCTCGACGTGCAACCACCGCAAGGGCGACAAACTGCTCAACGAGCTCGGCTGGACGCTGCGCCGGCCGCCGCTGCC
GCCCACCGGCCAACACTGGCGGCTGCTGTCGACCGTCAAGGAGCTGGACCCGGCCTGGGCGCGATATCTCGGTGAAGGTG
CGGCCTGA

Upstream 100 bases:

>100_bases
GCCCGAGCCCACTCCGGCTGTTCACCGGATCGACACGGCGTTCACCTGCAATAGGCGTGCGATTGGCGGCGAATCATGGT
GGACTGTTCGCGGAGGATCT

Downstream 100 bases:

>100_bases
GCCACATTCCGGTGTCCGGACGAGTGCAGCCCGGTGCGTGGGATACGGTTTGCGTCGTGAGTCCTATGCAGATGCACCTG
TTCATCGTCGGAATACCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; HNH Endonuclease Domain-Containing Protein; Restriction Endonuclease; HNH Endonuclease Domain Protein; HNH Nuclease; Hnh Endonuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MAQGKKRRRHRSQVAAAGLTGPPTASSLHSVETHPPTRPDSTSIWSRRRVLLLNSTYEPLTALPMRRAIVMVICGKADVV
HHDPAGPVIHSATSSIVMPSVIQLRSYVRVPYRARVPMTRAALMHRDRFCCAYCGAKADTVDHVVPRSRGGDHSWENCVA
CCSTCNHRKGDKLLNELGWTLRRPPLPPTGQHWRLLSTVKELDPAWARYLGEGAA

Sequences:

>Translated_215_residues
MAQGKKRRRHRSQVAAAGLTGPPTASSLHSVETHPPTRPDSTSIWSRRRVLLLNSTYEPLTALPMRRAIVMVICGKADVV
HHDPAGPVIHSATSSIVMPSVIQLRSYVRVPYRARVPMTRAALMHRDRFCCAYCGAKADTVDHVVPRSRGGDHSWENCVA
CCSTCNHRKGDKLLNELGWTLRRPPLPPTGQHWRLLSTVKELDPAWARYLGEGAA
>Mature_214_residues
AQGKKRRRHRSQVAAAGLTGPPTASSLHSVETHPPTRPDSTSIWSRRRVLLLNSTYEPLTALPMRRAIVMVICGKADVVH
HDPAGPVIHSATSSIVMPSVIQLRSYVRVPYRARVPMTRAALMHRDRFCCAYCGAKADTVDHVVPRSRGGDHSWENCVAC
CSTCNHRKGDKLLNELGWTLRRPPLPPTGQHWRLLSTVKELDPAWARYLGEGAA

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23837; Mature: 23706

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQGKKRRRHRSQVAAAGLTGPPTASSLHSVETHPPTRPDSTSIWSRRRVLLLNSTYEPL
CCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCH
TALPMRRAIVMVICGKADVVHHDPAGPVIHSATSSIVMPSVIQLRSYVRVPYRARVPMTR
HHHHHHHEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
AALMHRDRFCCAYCGAKADTVDHVVPRSRGGDHSWENCVACCSTCNHRKGDKLLNELGWT
HHHHHCCCHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCHH
LRRPPLPPTGQHWRLLSTVKELDPAWARYLGEGAA
HCCCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCC
>Mature Secondary Structure 
AQGKKRRRHRSQVAAAGLTGPPTASSLHSVETHPPTRPDSTSIWSRRRVLLLNSTYEPL
CCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCH
TALPMRRAIVMVICGKADVVHHDPAGPVIHSATSSIVMPSVIQLRSYVRVPYRARVPMTR
HHHHHHHEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
AALMHRDRFCCAYCGAKADTVDHVVPRSRGGDHSWENCVACCSTCNHRKGDKLLNELGWT
HHHHHCCCHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCHH
LRRPPLPPTGQHWRLLSTVKELDPAWARYLGEGAA
HCCCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA