Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408371

Identifier: 41408371

GI number: 41408371

Start: 2540418

End: 2541068

Strand: Reverse

Name: 41408371

Synonym: MAP2273c

Alternate gene names: NA

Gene position: 2541068-2540418 (Counterclockwise)

Preceding gene: 41408373

Following gene: 41408370

Centisome position: 52.61

GC content: 74.96

Gene sequence:

>651_bases
CTGGCCCGCCGCTGTCGTGCCCGACCCAGACGGCACGTCCCGAAGCAGGCATTCAACCAACAGCCTCAGCCCACCTTCGT
GGGCTTGCTTTGGCGCGCGCGCACCGCGAAAGGAAGGATATTGAGGAACGTCCGCAAGACGCTCATTCTCGCCGCGGTCA
CGGGCACGCTCGTGACCATCCCGTCCGCTACTGCTCACGCAGACGCGGAGCAGGTGGGCTTCGACCCGAACGTGCCGGCC
GCCGGCCCCGCCCCGGACGCGCCACCGCCCCCGGCCCCGGATGCTCCGCCGGCCCCGGCTCCGGACGCCCCGCCGGCCCC
GGACGCTCCGCCGCCCCCGGCTCCGGACGCCCCGCCGCCGGCCCCGGATGCGCCGCCGGCCCCGGGCCCGGACGTCCCGC
CGCCTCCCGCTCCCAAGGCGTACAGCGTGAACTGGGACGCCATCGCGCAGTGCGAGTCGGGCGGCAACTGGGGGATCAAC
ACCGGTAACGGCTACGCCGGTGGCCTGCAGTTCACCTCGAGCACCTGGCACGCCAACGGCGGCAGTGGCTCCCCGGCCGG
CGCCAGCCGCGAGGAGCAGATCCGGGTCGCCGAGAACGTGCTGCACTCGCAGGGCATCGGCGCGTGGCCGGTGTGCGGCC
GCCGCGGCTGA

Upstream 100 bases:

>100_bases
GGAAGAGTAATCGAAAATTGAATCCACGGACCCGCGTGTGAGCGGCGGCACGGACGGCGACAGCCCGCCCGTGACCGGTG
GGTGAAGCCCGCCGGCAGAC

Downstream 100 bases:

>100_bases
TCGCAGCCATCCAAGAAGTGCCGGGCCTAGTGCCCGGCACTTCTTGGCTCCAGGGGTAGCGTCGGGCCGGTGACCGCAAC
ACCGCGCGAATTCGACATTG

Product: hypothetical protein

Products: NA

Alternate protein names: Transglycosylase Domain-Containing Protein; Resuscitation-Promoting Factor RpfA; Resuscitation-Promoting Factor; Transglycosylase Domain Protein; Resuscitation-Promoting Factor RpfB; Transglycosylase-Like Protein; Peptidase; M23 Family Secreted Peptidase; M23 Peptidase Domain-Containing Protein; Resuscitation-Promoting Factor RpfC; Resuscitation-Promoting Factor RpfE; Transglycosylase Family Protein; Transglycosylase-Like Domain Protein; Resuscitation-Promoting Factor-Like Protein; Transglycosylase; Resuscitation-Promoting Factor Rpfe; Resuscitation-Promoting Factor RpfD; N-Acetylmuramoyl-L-Alanine Amidase; Secreted Esterase; Resuscitation-Promoting Factor Rpfd; Resuscitation-Promoting Factor Rpfb; Secreted Transglycosydase; G5 Domain Transglycosylase; Resuscitation-Promoting Factor Rpfa; Cell Wall Catabolism Protein; FHA Domain-Containing Protein; Transglycosylase-Like Domain-Containing Protein; Resuscitation-Promoting Factor Rpfc; M24/M37 Family Peptidase

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MARRCRARPRRHVPKQAFNQQPQPTFVGLLWRARTAKGRILRNVRKTLILAAVTGTLVTIPSATAHADAEQVGFDPNVPA
AGPAPDAPPPPAPDAPPAPAPDAPPAPDAPPPPAPDAPPPAPDAPPAPGPDVPPPPAPKAYSVNWDAIAQCESGGNWGIN
TGNGYAGGLQFTSSTWHANGGSGSPAGASREEQIRVAENVLHSQGIGAWPVCGRRG

Sequences:

>Translated_216_residues
MARRCRARPRRHVPKQAFNQQPQPTFVGLLWRARTAKGRILRNVRKTLILAAVTGTLVTIPSATAHADAEQVGFDPNVPA
AGPAPDAPPPPAPDAPPAPAPDAPPAPDAPPPPAPDAPPPAPDAPPAPGPDVPPPPAPKAYSVNWDAIAQCESGGNWGIN
TGNGYAGGLQFTSSTWHANGGSGSPAGASREEQIRVAENVLHSQGIGAWPVCGRRG
>Mature_215_residues
ARRCRARPRRHVPKQAFNQQPQPTFVGLLWRARTAKGRILRNVRKTLILAAVTGTLVTIPSATAHADAEQVGFDPNVPAA
GPAPDAPPPPAPDAPPAPAPDAPPAPDAPPPPAPDAPPPAPDAPPAPGPDVPPPPAPKAYSVNWDAIAQCESGGNWGINT
GNGYAGGLQFTSSTWHANGGSGSPAGASREEQIRVAENVLHSQGIGAWPVCGRRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22177; Mature: 22046

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRCRARPRRHVPKQAFNQQPQPTFVGLLWRARTAKGRILRNVRKTLILAAVTGTLVTI
CCCCCCCCCHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEC
PSATAHADAEQVGFDPNVPAAGPAPDAPPPPAPDAPPAPAPDAPPAPDAPPPPAPDAPPP
CCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APDAPPAPGPDVPPPPAPKAYSVNWDAIAQCESGGNWGINTGNGYAGGLQFTSSTWHANG
CCCCCCCCCCCCCCCCCCCEEECCHHHHHEECCCCCCCCCCCCCCCCCEEECCCEEECCC
GSGSPAGASREEQIRVAENVLHSQGIGAWPVCGRRG
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
ARRCRARPRRHVPKQAFNQQPQPTFVGLLWRARTAKGRILRNVRKTLILAAVTGTLVTI
CCCCCCCCHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEC
PSATAHADAEQVGFDPNVPAAGPAPDAPPPPAPDAPPAPAPDAPPAPDAPPPPAPDAPPP
CCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APDAPPAPGPDVPPPPAPKAYSVNWDAIAQCESGGNWGINTGNGYAGGLQFTSSTWHANG
CCCCCCCCCCCCCCCCCCCEEECCHHHHHEECCCCCCCCCCCCCCCCCEEECCCEEECCC
GSGSPAGASREEQIRVAENVLHSQGIGAWPVCGRRG
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA