Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is cyp124 [H]

Identifier: 41408359

GI number: 41408359

Start: 2525400

End: 2526710

Strand: Reverse

Name: cyp124 [H]

Synonym: MAP2261c

Alternate gene names: 41408359

Gene position: 2526710-2525400 (Counterclockwise)

Preceding gene: 41408361

Following gene: 41408356

Centisome position: 52.32

GC content: 68.65

Gene sequence:

>1311_bases
GTGACCGGTGTCATAGCGGAGAGGATCGGCATCATGGCCGTGCTGACGGGCGAGTCCGGGACCGATCGATCGGGCCGCCC
CTACGACGAGATCGACCTGTCGTCGCGGGCGTTCTGGTCCGGCACCGCCGCGGAGCGAGAACGCTCGTTCGCGGTGCTGC
GCGCCGAGCGGCCGGTGAGCTGGCATCCGCCGGTCGAAGACTCGTTGCTGCCCGATCCCACCGATCCCGGCTTCTGGGCG
GTCACCCGGCGCGCCGACATCGTGACGGTCAGCCGCAACAACGACGTCTTCCTGTCCGGGCACGGGGTGATGTTCGAGAG
CATTCCCGCGGAGCTGCTCGAGGCGTCGCAGTCGTTCCTGGCGATGGACCCGCCGCGGCACACCAAGTTGCGCAAGCTCG
CGCACGCCGCGCTCAGTCCCCGCCAGGTGCGCCGCATCGAGGACTCGATCAAGGCCAACGCCAAGGCCATCGTCGAGGAA
CTGCGCTCCGCCGGCAGCGGCTGTGACTTCGTCGACCACTGCGCCAAGGAGCTACCCATCCGCACGCTTTCGGACATGAT
GGGCATTCCCGAATCCGAGCGGGAACGCATGGCGCACGCCACCGACGCCCTGGTCTCGTGGGCCGACCCGGAGTTCCTCA
ACGGGCGCCCGGCGCTGGAAGTCCTGCTGGAAAACCAGATGTATCTGCACCAGGTCGTCGGCGACCTGGCCACCCAGCGC
CGCGAGCGGCCCGGCGACGACCTGATCAGCAGCCTGGTCACCGCCGAGGTCGACGGCGACCGCCTGGAGGACGCGGAGGT
GGCGGCGTTCTTCGTGCTGCTGTCGGTGGCCGGGAACGACACCACCCGGCAGACCATCAGCCACACCCTCAGGGCGCTCA
CCGTATTCCCTGACGAAAAGTTTTGGCTGCTCGAGGATTTCGGCCACCGCATCGGCACCGCGGTCGAGGAGTTCATCCGC
TGGGCGAGCCCGGTGATGACCTTCCGCCGCACCGCGGCAGCCGATGTCGAACTCGGCGGTCAGACCATCCTGGCGGGGGA
GAAGGTGGTCATGTTCTATCCGTCCGGCAACTGGGACACCGAGGCGTTCGACCATCCCGAACGTCTGAACCTGGGCCGTG
ACCCCAACCCGCACGTCGGCTTCGGCGGCGGCGGGCTGCACTTCTGCCTCGGCGCGCACGTGGCCCGGGCGCAGCTGCGG
GCCATCTTCTCCGAGTTGTTCCGGCAGCTGCCCGGCATCCAGGCCGGCGAGCCCACCTACCTGGCGGGCAATTTCGTGCA
CGCCATCCGCGCCATGCCCTGCACCTTCTGA

Upstream 100 bases:

>100_bases
CCCGGCGGCGTGCGGGTCACCGACGGCATGCGGCCAGCCTAGCCGACTATTCGACATATTGACTAGACACACTGTCTAGG
AATATCGTCGCCGATGTGCT

Downstream 100 bases:

>100_bases
CGCGTGTGGCGCTAATGCGTTGGCAGCGGCGATAACTCGTCGGCGAGCAGGGTCAGTAACTCCGAACACCCGCCGTCGAT
CTTGACGGTGGCCAAGTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MTGVIAERIGIMAVLTGESGTDRSGRPYDEIDLSSRAFWSGTAAERERSFAVLRAERPVSWHPPVEDSLLPDPTDPGFWA
VTRRADIVTVSRNNDVFLSGHGVMFESIPAELLEASQSFLAMDPPRHTKLRKLAHAALSPRQVRRIEDSIKANAKAIVEE
LRSAGSGCDFVDHCAKELPIRTLSDMMGIPESERERMAHATDALVSWADPEFLNGRPALEVLLENQMYLHQVVGDLATQR
RERPGDDLISSLVTAEVDGDRLEDAEVAAFFVLLSVAGNDTTRQTISHTLRALTVFPDEKFWLLEDFGHRIGTAVEEFIR
WASPVMTFRRTAAADVELGGQTILAGEKVVMFYPSGNWDTEAFDHPERLNLGRDPNPHVGFGGGGLHFCLGAHVARAQLR
AIFSELFRQLPGIQAGEPTYLAGNFVHAIRAMPCTF

Sequences:

>Translated_436_residues
MTGVIAERIGIMAVLTGESGTDRSGRPYDEIDLSSRAFWSGTAAERERSFAVLRAERPVSWHPPVEDSLLPDPTDPGFWA
VTRRADIVTVSRNNDVFLSGHGVMFESIPAELLEASQSFLAMDPPRHTKLRKLAHAALSPRQVRRIEDSIKANAKAIVEE
LRSAGSGCDFVDHCAKELPIRTLSDMMGIPESERERMAHATDALVSWADPEFLNGRPALEVLLENQMYLHQVVGDLATQR
RERPGDDLISSLVTAEVDGDRLEDAEVAAFFVLLSVAGNDTTRQTISHTLRALTVFPDEKFWLLEDFGHRIGTAVEEFIR
WASPVMTFRRTAAADVELGGQTILAGEKVVMFYPSGNWDTEAFDHPERLNLGRDPNPHVGFGGGGLHFCLGAHVARAQLR
AIFSELFRQLPGIQAGEPTYLAGNFVHAIRAMPCTF
>Mature_435_residues
TGVIAERIGIMAVLTGESGTDRSGRPYDEIDLSSRAFWSGTAAERERSFAVLRAERPVSWHPPVEDSLLPDPTDPGFWAV
TRRADIVTVSRNNDVFLSGHGVMFESIPAELLEASQSFLAMDPPRHTKLRKLAHAALSPRQVRRIEDSIKANAKAIVEEL
RSAGSGCDFVDHCAKELPIRTLSDMMGIPESERERMAHATDALVSWADPEFLNGRPALEVLLENQMYLHQVVGDLATQRR
ERPGDDLISSLVTAEVDGDRLEDAEVAAFFVLLSVAGNDTTRQTISHTLRALTVFPDEKFWLLEDFGHRIGTAVEEFIRW
ASPVMTFRRTAAADVELGGQTILAGEKVVMFYPSGNWDTEAFDHPERLNLGRDPNPHVGFGGGGLHFCLGAHVARAQLRA
IFSELFRQLPGIQAGEPTYLAGNFVHAIRAMPCTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome P450 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001128
- InterPro:   IPR002397 [H]

Pfam domain/function: PF00067 p450 [H]

EC number: NA

Molecular weight: Translated: 48138; Mature: 48007

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGVIAERIGIMAVLTGESGTDRSGRPYDEIDLSSRAFWSGTAAERERSFAVLRAERPVS
CCCHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCEEEEEECCCCC
WHPPVEDSLLPDPTDPGFWAVTRRADIVTVSRNNDVFLSGHGVMFESIPAELLEASQSFL
CCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHE
AMDPPRHTKLRKLAHAALSPRQVRRIEDSIKANAKAIVEELRSAGSGCDFVDHCAKELPI
ECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCH
RTLSDMMGIPESERERMAHATDALVSWADPEFLNGRPALEVLLENQMYLHQVVGDLATQR
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RERPGDDLISSLVTAEVDGDRLEDAEVAAFFVLLSVAGNDTTRQTISHTLRALTVFPDEK
HCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCC
FWLLEDFGHRIGTAVEEFIRWASPVMTFRRTAAADVELGGQTILAGEKVVMFYPSGNWDT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEECCCCCCC
EAFDHPERLNLGRDPNPHVGFGGGGLHFCLGAHVARAQLRAIFSELFRQLPGIQAGEPTY
CCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
LAGNFVHAIRAMPCTF
EHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TGVIAERIGIMAVLTGESGTDRSGRPYDEIDLSSRAFWSGTAAERERSFAVLRAERPVS
CCHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCEEEEEECCCCC
WHPPVEDSLLPDPTDPGFWAVTRRADIVTVSRNNDVFLSGHGVMFESIPAELLEASQSFL
CCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHE
AMDPPRHTKLRKLAHAALSPRQVRRIEDSIKANAKAIVEELRSAGSGCDFVDHCAKELPI
ECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCH
RTLSDMMGIPESERERMAHATDALVSWADPEFLNGRPALEVLLENQMYLHQVVGDLATQR
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RERPGDDLISSLVTAEVDGDRLEDAEVAAFFVLLSVAGNDTTRQTISHTLRALTVFPDEK
HCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCC
FWLLEDFGHRIGTAVEEFIRWASPVMTFRRTAAADVELGGQTILAGEKVVMFYPSGNWDT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEECCCCCCC
EAFDHPERLNLGRDPNPHVGFGGGGLHFCLGAHVARAQLRAIFSELFRQLPGIQAGEPTY
CCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
LAGNFVHAIRAMPCTF
EHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]