| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is cyp124 [H]
Identifier: 41408359
GI number: 41408359
Start: 2525400
End: 2526710
Strand: Reverse
Name: cyp124 [H]
Synonym: MAP2261c
Alternate gene names: 41408359
Gene position: 2526710-2525400 (Counterclockwise)
Preceding gene: 41408361
Following gene: 41408356
Centisome position: 52.32
GC content: 68.65
Gene sequence:
>1311_bases GTGACCGGTGTCATAGCGGAGAGGATCGGCATCATGGCCGTGCTGACGGGCGAGTCCGGGACCGATCGATCGGGCCGCCC CTACGACGAGATCGACCTGTCGTCGCGGGCGTTCTGGTCCGGCACCGCCGCGGAGCGAGAACGCTCGTTCGCGGTGCTGC GCGCCGAGCGGCCGGTGAGCTGGCATCCGCCGGTCGAAGACTCGTTGCTGCCCGATCCCACCGATCCCGGCTTCTGGGCG GTCACCCGGCGCGCCGACATCGTGACGGTCAGCCGCAACAACGACGTCTTCCTGTCCGGGCACGGGGTGATGTTCGAGAG CATTCCCGCGGAGCTGCTCGAGGCGTCGCAGTCGTTCCTGGCGATGGACCCGCCGCGGCACACCAAGTTGCGCAAGCTCG CGCACGCCGCGCTCAGTCCCCGCCAGGTGCGCCGCATCGAGGACTCGATCAAGGCCAACGCCAAGGCCATCGTCGAGGAA CTGCGCTCCGCCGGCAGCGGCTGTGACTTCGTCGACCACTGCGCCAAGGAGCTACCCATCCGCACGCTTTCGGACATGAT GGGCATTCCCGAATCCGAGCGGGAACGCATGGCGCACGCCACCGACGCCCTGGTCTCGTGGGCCGACCCGGAGTTCCTCA ACGGGCGCCCGGCGCTGGAAGTCCTGCTGGAAAACCAGATGTATCTGCACCAGGTCGTCGGCGACCTGGCCACCCAGCGC CGCGAGCGGCCCGGCGACGACCTGATCAGCAGCCTGGTCACCGCCGAGGTCGACGGCGACCGCCTGGAGGACGCGGAGGT GGCGGCGTTCTTCGTGCTGCTGTCGGTGGCCGGGAACGACACCACCCGGCAGACCATCAGCCACACCCTCAGGGCGCTCA CCGTATTCCCTGACGAAAAGTTTTGGCTGCTCGAGGATTTCGGCCACCGCATCGGCACCGCGGTCGAGGAGTTCATCCGC TGGGCGAGCCCGGTGATGACCTTCCGCCGCACCGCGGCAGCCGATGTCGAACTCGGCGGTCAGACCATCCTGGCGGGGGA GAAGGTGGTCATGTTCTATCCGTCCGGCAACTGGGACACCGAGGCGTTCGACCATCCCGAACGTCTGAACCTGGGCCGTG ACCCCAACCCGCACGTCGGCTTCGGCGGCGGCGGGCTGCACTTCTGCCTCGGCGCGCACGTGGCCCGGGCGCAGCTGCGG GCCATCTTCTCCGAGTTGTTCCGGCAGCTGCCCGGCATCCAGGCCGGCGAGCCCACCTACCTGGCGGGCAATTTCGTGCA CGCCATCCGCGCCATGCCCTGCACCTTCTGA
Upstream 100 bases:
>100_bases CCCGGCGGCGTGCGGGTCACCGACGGCATGCGGCCAGCCTAGCCGACTATTCGACATATTGACTAGACACACTGTCTAGG AATATCGTCGCCGATGTGCT
Downstream 100 bases:
>100_bases CGCGTGTGGCGCTAATGCGTTGGCAGCGGCGATAACTCGTCGGCGAGCAGGGTCAGTAACTCCGAACACCCGCCGTCGAT CTTGACGGTGGCCAAGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MTGVIAERIGIMAVLTGESGTDRSGRPYDEIDLSSRAFWSGTAAERERSFAVLRAERPVSWHPPVEDSLLPDPTDPGFWA VTRRADIVTVSRNNDVFLSGHGVMFESIPAELLEASQSFLAMDPPRHTKLRKLAHAALSPRQVRRIEDSIKANAKAIVEE LRSAGSGCDFVDHCAKELPIRTLSDMMGIPESERERMAHATDALVSWADPEFLNGRPALEVLLENQMYLHQVVGDLATQR RERPGDDLISSLVTAEVDGDRLEDAEVAAFFVLLSVAGNDTTRQTISHTLRALTVFPDEKFWLLEDFGHRIGTAVEEFIR WASPVMTFRRTAAADVELGGQTILAGEKVVMFYPSGNWDTEAFDHPERLNLGRDPNPHVGFGGGGLHFCLGAHVARAQLR AIFSELFRQLPGIQAGEPTYLAGNFVHAIRAMPCTF
Sequences:
>Translated_436_residues MTGVIAERIGIMAVLTGESGTDRSGRPYDEIDLSSRAFWSGTAAERERSFAVLRAERPVSWHPPVEDSLLPDPTDPGFWA VTRRADIVTVSRNNDVFLSGHGVMFESIPAELLEASQSFLAMDPPRHTKLRKLAHAALSPRQVRRIEDSIKANAKAIVEE LRSAGSGCDFVDHCAKELPIRTLSDMMGIPESERERMAHATDALVSWADPEFLNGRPALEVLLENQMYLHQVVGDLATQR RERPGDDLISSLVTAEVDGDRLEDAEVAAFFVLLSVAGNDTTRQTISHTLRALTVFPDEKFWLLEDFGHRIGTAVEEFIR WASPVMTFRRTAAADVELGGQTILAGEKVVMFYPSGNWDTEAFDHPERLNLGRDPNPHVGFGGGGLHFCLGAHVARAQLR AIFSELFRQLPGIQAGEPTYLAGNFVHAIRAMPCTF >Mature_435_residues TGVIAERIGIMAVLTGESGTDRSGRPYDEIDLSSRAFWSGTAAERERSFAVLRAERPVSWHPPVEDSLLPDPTDPGFWAV TRRADIVTVSRNNDVFLSGHGVMFESIPAELLEASQSFLAMDPPRHTKLRKLAHAALSPRQVRRIEDSIKANAKAIVEEL RSAGSGCDFVDHCAKELPIRTLSDMMGIPESERERMAHATDALVSWADPEFLNGRPALEVLLENQMYLHQVVGDLATQRR ERPGDDLISSLVTAEVDGDRLEDAEVAAFFVLLSVAGNDTTRQTISHTLRALTVFPDEKFWLLEDFGHRIGTAVEEFIRW ASPVMTFRRTAAADVELGGQTILAGEKVVMFYPSGNWDTEAFDHPERLNLGRDPNPHVGFGGGGLHFCLGAHVARAQLRA IFSELFRQLPGIQAGEPTYLAGNFVHAIRAMPCTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 48138; Mature: 48007
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGVIAERIGIMAVLTGESGTDRSGRPYDEIDLSSRAFWSGTAAERERSFAVLRAERPVS CCCHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCEEEEEECCCCC WHPPVEDSLLPDPTDPGFWAVTRRADIVTVSRNNDVFLSGHGVMFESIPAELLEASQSFL CCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHE AMDPPRHTKLRKLAHAALSPRQVRRIEDSIKANAKAIVEELRSAGSGCDFVDHCAKELPI ECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCH RTLSDMMGIPESERERMAHATDALVSWADPEFLNGRPALEVLLENQMYLHQVVGDLATQR HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RERPGDDLISSLVTAEVDGDRLEDAEVAAFFVLLSVAGNDTTRQTISHTLRALTVFPDEK HCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCC FWLLEDFGHRIGTAVEEFIRWASPVMTFRRTAAADVELGGQTILAGEKVVMFYPSGNWDT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEECCCCCCC EAFDHPERLNLGRDPNPHVGFGGGGLHFCLGAHVARAQLRAIFSELFRQLPGIQAGEPTY CCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE LAGNFVHAIRAMPCTF EHHHHHHHHHHCCCCC >Mature Secondary Structure TGVIAERIGIMAVLTGESGTDRSGRPYDEIDLSSRAFWSGTAAERERSFAVLRAERPVS CCHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCEEEEEECCCCC WHPPVEDSLLPDPTDPGFWAVTRRADIVTVSRNNDVFLSGHGVMFESIPAELLEASQSFL CCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHE AMDPPRHTKLRKLAHAALSPRQVRRIEDSIKANAKAIVEELRSAGSGCDFVDHCAKELPI ECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCH RTLSDMMGIPESERERMAHATDALVSWADPEFLNGRPALEVLLENQMYLHQVVGDLATQR HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RERPGDDLISSLVTAEVDGDRLEDAEVAAFFVLLSVAGNDTTRQTISHTLRALTVFPDEK HCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCC FWLLEDFGHRIGTAVEEFIRWASPVMTFRRTAAADVELGGQTILAGEKVVMFYPSGNWDT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEECCCCCCC EAFDHPERLNLGRDPNPHVGFGGGGLHFCLGAHVARAQLRAIFSELFRQLPGIQAGEPTY CCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE LAGNFVHAIRAMPCTF EHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]