| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408291
Identifier: 41408291
GI number: 41408291
Start: 2436134
End: 2437270
Strand: Direct
Name: 41408291
Synonym: MAP2193
Alternate gene names: NA
Gene position: 2436134-2437270 (Clockwise)
Preceding gene: 41408290
Following gene: 41408292
Centisome position: 50.44
GC content: 65.52
Gene sequence:
>1137_bases GTGCGCCTTCGCCGTTGGTGGCTGTTCCTTTCAGGGCGTGAACTCGTTGCCCCTGCCCGGTGCTGTCGGTCGCGGGCCAC ACGCCAGCATCTATCACATCGAGATCGCCAATATCGGCACCCTGGAATCGAATTCGCCGGTGATGATGGCCGACGTCATC GTGGGCAGCGTCGGCAAGATGCGGGTCAAGCACGATCACGCCGACGTCGAGGTCTCGGTGAAACCCGATGTGGTGGTGCC CGGAAACGCGGTGGCCGCCGTCGGACAGACCAGCCTGCTGGGTTCGATGCACGTGGAGCTCAGTCCCCCGCTGGGCCAAC CGCCGCGGGGACGGCTGCAGCCCGGGGCCACCATCCCGCTGGACAGGGCATCGTCGGCCGCTTGCAGGGTGTCCTGGGCC AGATCGGCGACATCGTGCACAACTTCAGCGCGGCGTTGTCCGGCCACGAGACCGATGTGCGCCAACTGCTGACGCGCCTC GACGAATTCGTCGGCGTCCTGGACCAACAGCGCGACAGGATCATTGCGTCGATCGACTCACTGAACCGGCTCGCCGGCAC ATTCGCCTCCCAGCGCGAGGTGATCACCCAAGCGCTGCGCAAGATTCCGCCCGCGCTCGACGTGCTGATCCGCGAACGGC CACGCATCACCGCGGCCCTGGACAAACTCCGCGTGTTCAGCAACACCGCAACGCAATTGGTCAATGAGACCCAGGCCGAC CTGGTGAAGAACCTGCAAAATCTGGAGCCGACGATCCAGGCGCTGGCGGACGTGGGGCCCGATCTCAGCACCGTTTTGGG ATATGTGCCGACCTTCCCGTTCACGCAGAACTTCATTGACCGGGCGGTGCGGGGTGACTACTTCAACGTCTTCGCCGTCA TCGACATGACCATTCCCCGGCTGAAGAGGACGCTGCTCGCCGGTACCCGGTGGGGAGATCCGGACGCGCCGCTGGTGCCC GCGCCGGGTGATCCCTGGTTTTCGAACTACACCTACGACCCGCTCGGTTTCGGCGTCACCAATCCGCCTTTGGCGCCGCC GCCTTCTCCCGGCGCGCCCGCTTCGGCGCCGCCTGTCATGGCTCCCGATATGAGTGTCATTGCGCCCGTGGATCAACCGT CGCGAGGCGGTGGCTGA
Upstream 100 bases:
>100_bases CTGCTGCTGCCCGACGATCGCCAGCCGGCGCCGGGCGATCAGCCGCCGCCGCCGGGCCCGGGGACGCCGCCATGACGAGG GTCCGGCTTTGTATCGTAGC
Downstream 100 bases:
>100_bases TGCTGACGCGGTTCGTGCGGATTCAGCTGACCATCTTCGCGCTCGCGTCGGTGGTCGCGATGGCGTTCATGTTCTTCCAG TACATGCAGGTGCCGACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE Family Protein; Mce Family Lipoe; MCE Family Lipoprotein LprM; MCE-Family Lipoprotein LprL; MCE Family Lipoprotein LprN; MCE Family Lipoprotein; MCE Family Lipoprotein LprK; Mce-Related Protein; MCE-Family Protein LprN; MCE-Family LipoE; Fis Family Transcriptional Regulator; Lipoprotein
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MRLRRWWLFLSGRELVAPARCCRSRATRQHLSHRDRQYRHPGIEFAGDDGRRHRGQRRQDAGQARSRRRRGLGETRCGGA RKRGGRRRTDQPAGFDARGAQSPAGPTAAGTAAARGHHPAGQGIVGRLQGVLGQIGDIVHNFSAALSGHETDVRQLLTRL DEFVGVLDQQRDRIIASIDSLNRLAGTFASQREVITQALRKIPPALDVLIRERPRITAALDKLRVFSNTATQLVNETQAD LVKNLQNLEPTIQALADVGPDLSTVLGYVPTFPFTQNFIDRAVRGDYFNVFAVIDMTIPRLKRTLLAGTRWGDPDAPLVP APGDPWFSNYTYDPLGFGVTNPPLAPPPSPGAPASAPPVMAPDMSVIAPVDQPSRGGG
Sequences:
>Translated_378_residues MRLRRWWLFLSGRELVAPARCCRSRATRQHLSHRDRQYRHPGIEFAGDDGRRHRGQRRQDAGQARSRRRRGLGETRCGGA RKRGGRRRTDQPAGFDARGAQSPAGPTAAGTAAARGHHPAGQGIVGRLQGVLGQIGDIVHNFSAALSGHETDVRQLLTRL DEFVGVLDQQRDRIIASIDSLNRLAGTFASQREVITQALRKIPPALDVLIRERPRITAALDKLRVFSNTATQLVNETQAD LVKNLQNLEPTIQALADVGPDLSTVLGYVPTFPFTQNFIDRAVRGDYFNVFAVIDMTIPRLKRTLLAGTRWGDPDAPLVP APGDPWFSNYTYDPLGFGVTNPPLAPPPSPGAPASAPPVMAPDMSVIAPVDQPSRGGG >Mature_378_residues MRLRRWWLFLSGRELVAPARCCRSRATRQHLSHRDRQYRHPGIEFAGDDGRRHRGQRRQDAGQARSRRRRGLGETRCGGA RKRGGRRRTDQPAGFDARGAQSPAGPTAAGTAAARGHHPAGQGIVGRLQGVLGQIGDIVHNFSAALSGHETDVRQLLTRL DEFVGVLDQQRDRIIASIDSLNRLAGTFASQREVITQALRKIPPALDVLIRERPRITAALDKLRVFSNTATQLVNETQAD LVKNLQNLEPTIQALADVGPDLSTVLGYVPTFPFTQNFIDRAVRGDYFNVFAVIDMTIPRLKRTLLAGTRWGDPDAPLVP APGDPWFSNYTYDPLGFGVTNPPLAPPPSPGAPASAPPVMAPDMSVIAPVDQPSRGGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41258; Mature: 41258
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRRWWLFLSGRELVAPARCCRSRATRQHLSHRDRQYRHPGIEFAGDDGRRHRGQRRQD CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHCCHHHHH AGQARSRRRRGLGETRCGGARKRGGRRRTDQPAGFDARGAQSPAGPTAAGTAAARGHHPA HHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC GQGIVGRLQGVLGQIGDIVHNFSAALSGHETDVRQLLTRLDEFVGVLDQQRDRIIASIDS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNRLAGTFASQREVITQALRKIPPALDVLIRERPRITAALDKLRVFSNTATQLVNETQAD HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LVKNLQNLEPTIQALADVGPDLSTVLGYVPTFPFTQNFIDRAVRGDYFNVFAVIDMTIPR HHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH LKRTLLAGTRWGDPDAPLVPAPGDPWFSNYTYDPLGFGVTNPPLAPPPSPGAPASAPPVM HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APDMSVIAPVDQPSRGGG CCCCCEEECCCCCCCCCC >Mature Secondary Structure MRLRRWWLFLSGRELVAPARCCRSRATRQHLSHRDRQYRHPGIEFAGDDGRRHRGQRRQD CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHCCHHHHH AGQARSRRRRGLGETRCGGARKRGGRRRTDQPAGFDARGAQSPAGPTAAGTAAARGHHPA HHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC GQGIVGRLQGVLGQIGDIVHNFSAALSGHETDVRQLLTRLDEFVGVLDQQRDRIIASIDS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNRLAGTFASQREVITQALRKIPPALDVLIRERPRITAALDKLRVFSNTATQLVNETQAD HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LVKNLQNLEPTIQALADVGPDLSTVLGYVPTFPFTQNFIDRAVRGDYFNVFAVIDMTIPR HHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH LKRTLLAGTRWGDPDAPLVPAPGDPWFSNYTYDPLGFGVTNPPLAPPPSPGAPASAPPVM HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APDMSVIAPVDQPSRGGG CCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA