Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is mtb12 [H]

Identifier: 41408266

GI number: 41408266

Start: 2399641

End: 2400177

Strand: Reverse

Name: mtb12 [H]

Synonym: MAP2168c

Alternate gene names: 41408266

Gene position: 2400177-2399641 (Counterclockwise)

Preceding gene: 41408267

Following gene: 41408265

Centisome position: 49.7

GC content: 68.34

Gene sequence:

>537_bases
GTGAAAACCGTGAAGTCCATTGCCACGGGCGTGGCGGCGCTGACCGCCATCGGCGGCCCGGCCGCCGGTGTGGCTTCCAT
GGCAGCGCCGACCGGTCTGCATGAGGTGCAGTTGGCGGCGTTCGAAGCGCCGCTGCCGCAAGACCCGCCGCCACCGCCGC
CCCCGCCGCCGGGAGCGCCGGGCCAGTTGCCGACGGCGGATCAATTGGCCAACCTCTGCAACCAGGTGACCGATCCGGGC
GTGAACTACCGGGAGAAGGCCAACTTGGTGGAAAACGGCGTCAGCCAGAACGAGGGTATGGTGGCCGACCACGACCTGCG
GAAGGCGTACCGCAACGGGAACTTCCCCGAGCAGTTCAACGTCACCAACATCGCGCCGGCCGGACCCAACATGGCCCAAG
CCGACGTCGGCATCACGGGGCCCAAGTTCGCCGGGCCGGTCAACAAGCACCTGGTGTTCGTCAACCAGGGCGGCAACTGG
GTCCTGCAGCACGACGCCGCGATCGCGCTGATCCAGGCGGCCACCGCGATGAACTGA

Upstream 100 bases:

>100_bases
GCAAGGCACACTTACACCATCTTCAACCATGAAGACGTGTGACCGCGTGCGGCGCAACCGCAAAACCCCGCCACGGTCCA
TGCGCATCGAAGGGGGACCT

Downstream 100 bases:

>100_bases
CCGACATCGGTAAACCCTTGCCGGACCGCCGAATTCGTGTACAAGCAGCGACGGTCATCGACCCCCATGCGCCACTCGTC
CAGGGGCGCATGGGGGTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKTVKSIATGVAALTAIGGPAAGVASMAAPTGLHEVQLAAFEAPLPQDPPPPPPPPPGAPGQLPTADQLANLCNQVTDPG
VNYREKANLVENGVSQNEGMVADHDLRKAYRNGNFPEQFNVTNIAPAGPNMAQADVGITGPKFAGPVNKHLVFVNQGGNW
VLQHDAAIALIQAATAMN

Sequences:

>Translated_178_residues
MKTVKSIATGVAALTAIGGPAAGVASMAAPTGLHEVQLAAFEAPLPQDPPPPPPPPPGAPGQLPTADQLANLCNQVTDPG
VNYREKANLVENGVSQNEGMVADHDLRKAYRNGNFPEQFNVTNIAPAGPNMAQADVGITGPKFAGPVNKHLVFVNQGGNW
VLQHDAAIALIQAATAMN
>Mature_178_residues
MKTVKSIATGVAALTAIGGPAAGVASMAAPTGLHEVQLAAFEAPLPQDPPPPPPPPPGAPGQLPTADQLANLCNQVTDPG
VNYREKANLVENGVSQNEGMVADHDLRKAYRNGNFPEQFNVTNIAPAGPNMAQADVGITGPKFAGPVNKHLVFVNQGGNW
VLQHDAAIALIQAATAMN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MTB12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020235
- ProDom:   PD033474 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18279; Mature: 18279

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVKSIATGVAALTAIGGPAAGVASMAAPTGLHEVQLAAFEAPLPQDPPPPPPPPPGAP
CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
GQLPTADQLANLCNQVTDPGVNYREKANLVENGVSQNEGMVADHDLRKAYRNGNFPEQFN
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
VTNIAPAGPNMAQADVGITGPKFAGPVNKHLVFVNQGGNWVLQHDAAIALIQAATAMN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHCC
>Mature Secondary Structure
MKTVKSIATGVAALTAIGGPAAGVASMAAPTGLHEVQLAAFEAPLPQDPPPPPPPPPGAP
CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
GQLPTADQLANLCNQVTDPGVNYREKANLVENGVSQNEGMVADHDLRKAYRNGNFPEQFN
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
VTNIAPAGPNMAQADVGITGPKFAGPVNKHLVFVNQGGNWVLQHDAAIALIQAATAMN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]