Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408233

Identifier: 41408233

GI number: 41408233

Start: 2365409

End: 2365840

Strand: Reverse

Name: 41408233

Synonym: MAP2135c

Alternate gene names: NA

Gene position: 2365840-2365409 (Counterclockwise)

Preceding gene: 41408234

Following gene: 41408230

Centisome position: 48.98

GC content: 65.05

Gene sequence:

>432_bases
ATGCTGTTCGACACACGCGTAACGTACGGAAAATCAGCAATTCCCGCATATTCTCTTCGGTTTGTCTTACGATGTGAACC
GGTTGGTGTAAATAGGTTCGCCACAGCGTCCGAACGCTTCGATCGGCTGTGGAAGGGGGCAGGGGTGCTGTTGCCTCTTG
GTTCGCCGTTGCCGGATGACACGGTGTCGGCAGTACGCGGTGAGTCAGGCGTGCTGGGTGGCTTGTCGGTCCCACTCAAA
TGGGGCGTGGCCGTTCCACCCGACGACTACGACCACTGGGCGCCGAAGCCGGAAGCGAGCGCCGAGGCCGTCGAGGAGAC
GGCCGAGATGCCCCGCCCGACCGCGGTCGCCGACGGGGTCTGGAGCGGGTGGGACGGCGAAGCCGTACCGCGCACCGCGG
GCGTCATACCGCATTCCCCGGCCGCCGGCTGA

Upstream 100 bases:

>100_bases
TTTTAGCGCTGCCGGCGCGTACGAGGGATTAGCGCGGGCACCGGTCGGCGGCGTGTCGCGCTGCGACGGTGCACCGCCCG
GGGCCGGACGGCGGCGGCCG

Downstream 100 bases:

>100_bases
GCCCCGCTAGCACCGAAAGTCCCTGCGGGGGCTGGTTTCTGGTCGCTCAGAATCGGCCGCCGCCACCCAGGAAACCGCCG
CCGGAGGAACTCGTGCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MLFDTRVTYGKSAIPAYSLRFVLRCEPVGVNRFATASERFDRLWKGAGVLLPLGSPLPDDTVSAVRGESGVLGGLSVPLK
WGVAVPPDDYDHWAPKPEASAEAVEETAEMPRPTAVADGVWSGWDGEAVPRTAGVIPHSPAAG

Sequences:

>Translated_143_residues
MLFDTRVTYGKSAIPAYSLRFVLRCEPVGVNRFATASERFDRLWKGAGVLLPLGSPLPDDTVSAVRGESGVLGGLSVPLK
WGVAVPPDDYDHWAPKPEASAEAVEETAEMPRPTAVADGVWSGWDGEAVPRTAGVIPHSPAAG
>Mature_143_residues
MLFDTRVTYGKSAIPAYSLRFVLRCEPVGVNRFATASERFDRLWKGAGVLLPLGSPLPDDTVSAVRGESGVLGGLSVPLK
WGVAVPPDDYDHWAPKPEASAEAVEETAEMPRPTAVADGVWSGWDGEAVPRTAGVIPHSPAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15125; Mature: 15125

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFDTRVTYGKSAIPAYSLRFVLRCEPVGVNRFATASERFDRLWKGAGVLLPLGSPLPDD
CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCH
TVSAVRGESGVLGGLSVPLKWGVAVPPDDYDHWAPKPEASAEAVEETAEMPRPTAVADGV
HHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
WSGWDGEAVPRTAGVIPHSPAAG
CCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLFDTRVTYGKSAIPAYSLRFVLRCEPVGVNRFATASERFDRLWKGAGVLLPLGSPLPDD
CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCH
TVSAVRGESGVLGGLSVPLKWGVAVPPDDYDHWAPKPEASAEAVEETAEMPRPTAVADGV
HHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
WSGWDGEAVPRTAGVIPHSPAAG
CCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA