| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408204
Identifier: 41408204
GI number: 41408204
Start: 2333150
End: 2333617
Strand: Reverse
Name: 41408204
Synonym: MAP2106c
Alternate gene names: NA
Gene position: 2333617-2333150 (Counterclockwise)
Preceding gene: 41408205
Following gene: 41408201
Centisome position: 48.32
GC content: 68.16
Gene sequence:
>468_bases ATGGCGGGCGCGGTCGTCGTGTCGGCGGCGCTGCCGGTGCCCGCCGCGCACGCCGACAACAAGCGGCTCAACAGCGCCGT CGTCTCCGCCGTCTACACCCTGCAGCACCAGGCGGGCTGCACCAACGACGTGGTCAGGAACAACGCACTCACCCTGGCCG CCGAATGGCACGCCGAAGACATGATCAACAACCGAAACATCAACGACGACATCGGTTCCGACGGATCGACGCCGCAGGAC CGGGCCAATGCCGCCGGCTTTCGCGGCAGGGCCGCCGAGACGGTGGCCATCAACCCGGCGATGGCGATCAGCAGCCTCGA GCTGGTCAACCAGTGGTATGCCAACCCGGACGACATGGCGATCATCCGGGACTGCGCCAACACCTCCATCGGGGTGTGGT CGGACAACAGCCTGGACCGCACCGTCGTGGTCGCCGTCTACGGCCAGCCCGATCCGGCCCGGCGGTAG
Upstream 100 bases:
>100_bases CGTCCGGATGACCTTGGACAAGGTCAACGGCCGCTGGTTGGTGTCCCGCTTCGAACCGGTGTGAGGCGTGTCGGTATCGG TGAGCCGCGCCGCCCGCCTG
Downstream 100 bases:
>100_bases CGGCGCGATCGGTGGCGGCTACCCGCTGGAAATGGACTCGCTCGCCAGCTCGCACACGCACACCTGGCCGCCGCGCCGCC AGGTGCCGAACTGTGTTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MAGAVVVSAALPVPAAHADNKRLNSAVVSAVYTLQHQAGCTNDVVRNNALTLAAEWHAEDMINNRNINDDIGSDGSTPQD RANAAGFRGRAAETVAINPAMAISSLELVNQWYANPDDMAIIRDCANTSIGVWSDNSLDRTVVVAVYGQPDPARR
Sequences:
>Translated_155_residues MAGAVVVSAALPVPAAHADNKRLNSAVVSAVYTLQHQAGCTNDVVRNNALTLAAEWHAEDMINNRNINDDIGSDGSTPQD RANAAGFRGRAAETVAINPAMAISSLELVNQWYANPDDMAIIRDCANTSIGVWSDNSLDRTVVVAVYGQPDPARR >Mature_154_residues AGAVVVSAALPVPAAHADNKRLNSAVVSAVYTLQHQAGCTNDVVRNNALTLAAEWHAEDMINNRNINDDIGSDGSTPQDR ANAAGFRGRAAETVAINPAMAISSLELVNQWYANPDDMAIIRDCANTSIGVWSDNSLDRTVVVAVYGQPDPARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16441; Mature: 16310
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGAVVVSAALPVPAAHADNKRLNSAVVSAVYTLQHQAGCTNDVVRNNALTLAAEWHAED CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCHHH MINNRNINDDIGSDGSTPQDRANAAGFRGRAAETVAINPAMAISSLELVNQWYANPDDMA HHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCHH IIRDCANTSIGVWSDNSLDRTVVVAVYGQPDPARR HHHHHCCCEEEEECCCCCCCEEEEEEECCCCCCCC >Mature Secondary Structure AGAVVVSAALPVPAAHADNKRLNSAVVSAVYTLQHQAGCTNDVVRNNALTLAAEWHAED CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCHHH MINNRNINDDIGSDGSTPQDRANAAGFRGRAAETVAINPAMAISSLELVNQWYANPDDMA HHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCHH IIRDCANTSIGVWSDNSLDRTVVVAVYGQPDPARR HHHHHCCCEEEEECCCCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA