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The map label for this gene is asnC [C]

Identifier: 41408194

GI number: 41408194

Start: 2317868

End: 2318314

Strand: Direct

Name: asnC [C]

Synonym: MAP2096

Alternate gene names: 41408194

Gene position: 2317868-2318314 (Clockwise)

Preceding gene: 41408190

Following gene: 41408197

Centisome position: 47.99

GC content: 67.79

Gene sequence:

>447_bases
ATGGATCGCCTGGACGACACCGACGAGCGCATCCTCGCCGAGCTGACCGAGCACGCCCGCGCCACCTTCGCCGAAATCGG
CGACAAGGTGAACCTGTCGGCGCCGGCGGTGAAGCGCCGCGTCGACCGGATGCTGGACAGCGGGGTCATCAAGGGCTTCA
CCACCGTCGTCGACCGCAACGCACTGGGCTGGAACACCGAGGCCTACGTTCAGGTGTTCTGCCACGGCCGCATCGCGCCC
GACGAGCTGCGGGCGGCCTGGGTGGACATCCCCGAGGTGTTCAGCGCCGCGACGGTGACCGGCACCCCGGACGCCATCCT
GCACGTATTGGCCCGCGACATGCGGCATTTGGAGGTGGCGTTGGAACGGATCCGGTCCAGCGCGGACGTCGAACGCAGCG
AAAGCATCGTCGTGTTGTCCAACCTCATCGACCGGATGCGGCCCTAG

Upstream 100 bases:

>100_bases
CCCTAGACAATCAAACGACTATTATTGCGGGTATACCGCCGATTTATTGCGCTATAGTCGGATATTCGATGATTTGTTGT
CTCAGCACCGGGGAGGCGTC

Downstream 100 bases:

>100_bases
CGGGCGCGCAGGAACCGGCCGGCCTACTGGAAGGGGATCATCGAGTCCAGCGCCACCCCGATGGCACCGGCGGCGACGGT
GATGGTCAGGGTCACCCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MDRLDDTDERILAELTEHARATFAEIGDKVNLSAPAVKRRVDRMLDSGVIKGFTTVVDRNALGWNTEAYVQVFCHGRIAP
DELRAAWVDIPEVFSAATVTGTPDAILHVLARDMRHLEVALERIRSSADVERSESIVVLSNLIDRMRP

Sequences:

>Translated_148_residues
MDRLDDTDERILAELTEHARATFAEIGDKVNLSAPAVKRRVDRMLDSGVIKGFTTVVDRNALGWNTEAYVQVFCHGRIAP
DELRAAWVDIPEVFSAATVTGTPDAILHVLARDMRHLEVALERIRSSADVERSESIVVLSNLIDRMRP
>Mature_148_residues
MDRLDDTDERILAELTEHARATFAEIGDKVNLSAPAVKRRVDRMLDSGVIKGFTTVVDRNALGWNTEAYVQVFCHGRIAP
DELRAAWVDIPEVFSAATVTGTPDAILHVLARDMRHLEVALERIRSSADVERSESIVVLSNLIDRMRP

Specific function: Activator Of Asna Transcription; Autogenous Regulator Of Its Own Transcription; And Repressor Of The Expression Of Gida At A Post-Transcriptional Level. [C]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 16537; Mature: 16537

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLDDTDERILAELTEHARATFAEIGDKVNLSAPAVKRRVDRMLDSGVIKGFTTVVDRN
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
ALGWNTEAYVQVFCHGRIAPDELRAAWVDIPEVFSAATVTGTPDAILHVLARDMRHLEVA
CCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LERIRSSADVERSESIVVLSNLIDRMRP
HHHHHHHCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MDRLDDTDERILAELTEHARATFAEIGDKVNLSAPAVKRRVDRMLDSGVIKGFTTVVDRN
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
ALGWNTEAYVQVFCHGRIAPDELRAAWVDIPEVFSAATVTGTPDAILHVLARDMRHLEVA
CCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LERIRSSADVERSESIVVLSNLIDRMRP
HHHHHHHCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA