| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408172
Identifier: 41408172
GI number: 41408172
Start: 2282873
End: 2283466
Strand: Reverse
Name: 41408172
Synonym: MAP2074c
Alternate gene names: NA
Gene position: 2283466-2282873 (Counterclockwise)
Preceding gene: 41408173
Following gene: 41408171
Centisome position: 47.28
GC content: 75.59
Gene sequence:
>594_bases GTGCCCGCCTGGCGGAGGGAGCGGTCGATCCCACGCCGGACGCGGTGGTTCACCCGGTCCCCAGGGGGCGGGTCCGTCGC CCCACGGGGCGCCGTGGAAGTAGCCACGTTGGGAGTCCCCATGCCAGGGACCACCCGGGCCGCCGGGGTGATCGGGCCCG CCCGGCCCACCGGGGCGGCCGGGGTGATCGGGACCGCCAGGTCCACCTGGTCCACCAGGGCCACCGGGATGACCGGGGCC GCCGGGACCGCCAGGCGGCCCACCGGGCCCACCCGGCCCGCCGGGACCGCCCGGTCCGCCCGGGTCATTGGGGCCGGTCG GATGGTGGAAATCTCCGGGCTGCGACCCGCCATGGCCGGGACCGCCGGCGGGAGGGGCGCCATGCCCGCCAGGAGGCGGC GGTGCCCCGGGAGCGGCGCCGGCGAACCCGGCGCCCATTCCCAACGCGGCGGCGCCGAGCGCCCCGGCGATGCCCACCCC TCCGACAAATTGCTTCAACCTCACGATGCTTCACCTATCCACTCGGTCCACTCGGGATCTCTGCGAAAGGGGAATTCCTC GAACGCCCCCCGACACCACCCAGACACTAGATAG
Upstream 100 bases:
>100_bases GGATCCACACTCCGAAGAACCAGAAGCCCCACTGATTGAACCCGGGATCCCAGACGGGAGTCTCCTGGTAGCCCCAGTAG TTGATCGGGCCGTAATCCCA
Downstream 100 bases:
>100_bases CTTCCCTATGGACCAGCTGTGTCCCGCCCATGCAAAGGTTTGATCCCGGTCAACCGGCACCCGCGAGCGCTGGTTTGGCA AGGCTATGTTGGCTAGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MPAWRRERSIPRRTRWFTRSPGGGSVAPRGAVEVATLGVPMPGTTRAAGVIGPARPTGAAGVIGTARSTWSTRATGMTGA AGTARRPTGPTRPAGTARSARVIGAGRMVEISGLRPAMAGTAGGRGAMPARRRRCPGSGAGEPGAHSQRGGAERPGDAHP SDKLLQPHDASPIHSVHSGSLRKGNSSNAPRHHPDTR
Sequences:
>Translated_197_residues MPAWRRERSIPRRTRWFTRSPGGGSVAPRGAVEVATLGVPMPGTTRAAGVIGPARPTGAAGVIGTARSTWSTRATGMTGA AGTARRPTGPTRPAGTARSARVIGAGRMVEISGLRPAMAGTAGGRGAMPARRRRCPGSGAGEPGAHSQRGGAERPGDAHP SDKLLQPHDASPIHSVHSGSLRKGNSSNAPRHHPDTR >Mature_196_residues PAWRRERSIPRRTRWFTRSPGGGSVAPRGAVEVATLGVPMPGTTRAAGVIGPARPTGAAGVIGTARSTWSTRATGMTGAA GTARRPTGPTRPAGTARSARVIGAGRMVEISGLRPAMAGTAGGRGAMPARRRRCPGSGAGEPGAHSQRGGAERPGDAHPS DKLLQPHDASPIHSVHSGSLRKGNSSNAPRHHPDTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20126; Mature: 19995
Theoretical pI: Translated: 12.72; Mature: 12.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAWRRERSIPRRTRWFTRSPGGGSVAPRGAVEVATLGVPMPGTTRAAGVIGPARPTGAA CCCCCCHHCCCCHHHEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC GVIGTARSTWSTRATGMTGAAGTARRPTGPTRPAGTARSARVIGAGRMVEISGLRPAMAG CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCHHHC TAGGRGAMPARRRRCPGSGAGEPGAHSQRGGAERPGDAHPSDKLLQPHDASPIHSVHSGS CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC LRKGNSSNAPRHHPDTR CCCCCCCCCCCCCCCCC >Mature Secondary Structure PAWRRERSIPRRTRWFTRSPGGGSVAPRGAVEVATLGVPMPGTTRAAGVIGPARPTGAA CCCCCHHCCCCHHHEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC GVIGTARSTWSTRATGMTGAAGTARRPTGPTRPAGTARSARVIGAGRMVEISGLRPAMAG CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCHHHC TAGGRGAMPARRRRCPGSGAGEPGAHSQRGGAERPGDAHPSDKLLQPHDASPIHSVHSGS CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC LRKGNSSNAPRHHPDTR CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA