| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408171
Identifier: 41408171
GI number: 41408171
Start: 2282030
End: 2282743
Strand: Reverse
Name: 41408171
Synonym: MAP2073c
Alternate gene names: NA
Gene position: 2282743-2282030 (Counterclockwise)
Preceding gene: 41408172
Following gene: 41408170
Centisome position: 47.26
GC content: 69.05
Gene sequence:
>714_bases GTGTCGAGTACGCCACACCCGGCCGAACCCCACATCGGTTCGGTGTCGTCGAAGTTGAATTGGCTGCGCGCCGGCGTTCT GGGCGCCAACGATGGAATCGTCTCCACCGCAGGCATTGTCGTGGGCGTCGCCGCGGCCACGGCGCTGCGCGCTCCCATCC TGACTGCCGGCAGCGCCGGACTGGTGGCCGGGGCGGTGTCGATGGCGCTGGGCGAATACGTCTCGGTCAGCACCCAGCGC GATACCGAGAAGGCGCTGCTGATCCAGGAGCATCAGGAGCTGCGTGACGATCCGGCCGCCGAACTCGACGAGCTCGCCGC GCTCTACGAAGCCAAGGGTCTGACCGCGGCGACGGCGCGTACCGTGGCCGAGGAACTCACCGATCAGAATCCGCTGCTGG CCCATGCCGAGGTCGAGCTGGGCATCAATCCCGAGGAGCTGACGAATCCGTGGCATGCCGCGTCGTCCTCGGCGCTCTCG TTCGCCATCGGCGCGTTGCTCCCGTTGATCGCGATTCTGCTGCCGCCGCCGACGTGGCGGATTCCGGTCACCGTCGTGGC GGTGCTCATCGCGCTGGTGATCACCGGCGCGGTATCGGCCCGCCTCGGTGGCGCGCCGCAGCTTCGCGCCGTGGCGCGTA ACGCCATCGGAGGCAGCCTCGCACTGGCGGTCACCTACACGATCGGCCACGTGGTCGGCGCCGCGATCGACTGA
Upstream 100 bases:
>100_bases ATGCAAAGGTTTGATCCCGGTCAACCGGCACCCGCGAGCGCTGGTTTGGCAAGGCTATGTTGGCTAGTCGCGCACGGTTT TCGTCTATATCGTTGCCGCC
Downstream 100 bases:
>100_bases CCACGCCGGCGCATCGGGCCGACTGGAAGCGCAACTGTAAGATCCACGGTTGCGGTCCTCAGCAGAGGCCGCACAACCCG TCGCGTGAAGGGTCATGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Nodulin-Related Protein; Nodulin; Iron And Manganese Transporter; Nodulin-Related Integral Membrane Protein DUF; Mebrane Associated Protein DUF; Ypothetical Protein SMU.
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MSSTPHPAEPHIGSVSSKLNWLRAGVLGANDGIVSTAGIVVGVAAATALRAPILTAGSAGLVAGAVSMALGEYVSVSTQR DTEKALLIQEHQELRDDPAAELDELAALYEAKGLTAATARTVAEELTDQNPLLAHAEVELGINPEELTNPWHAASSSALS FAIGALLPLIAILLPPPTWRIPVTVVAVLIALVITGAVSARLGGAPQLRAVARNAIGGSLALAVTYTIGHVVGAAID
Sequences:
>Translated_237_residues MSSTPHPAEPHIGSVSSKLNWLRAGVLGANDGIVSTAGIVVGVAAATALRAPILTAGSAGLVAGAVSMALGEYVSVSTQR DTEKALLIQEHQELRDDPAAELDELAALYEAKGLTAATARTVAEELTDQNPLLAHAEVELGINPEELTNPWHAASSSALS FAIGALLPLIAILLPPPTWRIPVTVVAVLIALVITGAVSARLGGAPQLRAVARNAIGGSLALAVTYTIGHVVGAAID >Mature_236_residues SSTPHPAEPHIGSVSSKLNWLRAGVLGANDGIVSTAGIVVGVAAATALRAPILTAGSAGLVAGAVSMALGEYVSVSTQRD TEKALLIQEHQELRDDPAAELDELAALYEAKGLTAATARTVAEELTDQNPLLAHAEVELGINPEELTNPWHAASSSALSF AIGALLPLIAILLPPPTWRIPVTVVAVLIALVITGAVSARLGGAPQLRAVARNAIGGSLALAVTYTIGHVVGAAID
Specific function: Unknown
COG id: COG1814
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24053; Mature: 23922
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTPHPAEPHIGSVSSKLNWLRAGVLGANDGIVSTAGIVVGVAAATALRAPILTAGSAG CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH LVAGAVSMALGEYVSVSTQRDTEKALLIQEHQELRDDPAAELDELAALYEAKGLTAATAR HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHH TVAEELTDQNPLLAHAEVELGINPEELTNPWHAASSSALSFAIGALLPLIAILLPPPTWR HHHHHHCCCCCCEEEEEEEECCCHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC IPVTVVAVLIALVITGAVSARLGGAPQLRAVARNAIGGSLALAVTYTIGHVVGAAID CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSTPHPAEPHIGSVSSKLNWLRAGVLGANDGIVSTAGIVVGVAAATALRAPILTAGSAG CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH LVAGAVSMALGEYVSVSTQRDTEKALLIQEHQELRDDPAAELDELAALYEAKGLTAATAR HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHH TVAEELTDQNPLLAHAEVELGINPEELTNPWHAASSSALSFAIGALLPLIAILLPPPTWR HHHHHHCCCCCCEEEEEEEECCCHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC IPVTVVAVLIALVITGAVSARLGGAPQLRAVARNAIGGSLALAVTYTIGHVVGAAID CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA