| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is htpG
Identifier: 41408167
GI number: 41408167
Start: 2276782
End: 2278716
Strand: Reverse
Name: htpG
Synonym: MAP2069c
Alternate gene names: 41408167
Gene position: 2278716-2276782 (Counterclockwise)
Preceding gene: 41408169
Following gene: 41408166
Centisome position: 47.18
GC content: 64.39
Gene sequence:
>1935_bases ATGAACGCGCGCGTCGAGCAGTTGGAGTTTCAAGCCGAGGCTCGGCAACTGCTGGATCTGATGGTCCACTCCGTCTACTC CAACAAGGACTCGTTCCTGCGGGAGTTGATCTCGAACGCTTCCGACGCACTGGACAAGCTGCGGCTGGAAGCCTTCCGCA ACAAGGACCTCGACGTCGACACCTCCGACCTGCACATCCAGATCGAGGTGGACAAGGATGCGCGCACCCTGACCATCCGC GACAACGGCATCGGCATGACCCGCGCCGAGGTGGTCGACCTGATCGGCACCCTGGCCAAGTCGGGCACCGCCGAATTGCG CCAACAACTCCGGGAAGCCAAGAACGCCCAGAACGAAGCCGCCTCAGAGGAACTCATCGGCCAGTTCGGCATCGGCTTCT ACTCCAGCTTCATGGTGGCCGACAAGGTCGAACTGCTCACCCGCAAGGCCGGCGAGAGCGAGGCCACCAAATGGGAGTCG AGCGGCGAGGGCACCTACACCATCGAATCGGTCGAGAACGCCCCGCAGGGAACCTCGGTCACCCTGCATCTGAAGCCCGA GGACACCGAGGACGAGCTGCACGACTACACCTCGGAGTTCAAGATCAAGAGCCTGGTCAAGAAGTACTCCGACTTCATCG CCTGGCCCATCCGGATGGAGGTGGAGCGGCGCACGCCCGCCACCGAAGAGGGCGGCGAGGAGACCGTCACCCGGGAGGTC GAGACCCTCAACTCGATGAAGGCCCTGTGGGCCCGGCCCAAGGACGAGGTCTCCGAGGAGGAGTACAAGGAGTTCTACAA GCACATCGCGCACGCCTGGGACGACCCGCTCGAGGTCATCGCGATGAAGGCCGAGGGCACCTTCGAGTACCAGGCGCTGC TGTTCATCCCGTCCCACGCCCCGTTCGACCTGTTCAACCGGGACGCGCACACCGGCATCCAGCTCTACGTCAAGCGGGTG TTCATCATGGGTGACTGCGACCAGCTGATGCCCGAATACCTGCGCTTCGTCAAGGGTGTCGTTGACGCACAGGACATGTC GCTCAACGTGTCCCGCGAGATCCTGCAACAGGACCGGCAGATCAAGGCCATCCGGCGGCGGCTGACCAAGAAGGTTCTGT CCACCATCAAGGAGTTGCAATCCGAGCGGCTCGACGACTACCGGACCTTCTGGACTCAGTTCGGCCGGGTGGTCAAGGAG GGTCTGCTGTCGGACTTCGACAACCAGGAGACGCTGGTGCAGCTCTGCTCCTTCGCCTCGACGCACAGCGAGGAGGAGGC CACCACGCTGGCCCAGTACGTCGAGCGGATGAAGGAAGGGCAGACGCAGATCTTCTACGCCACCGGCGAAACGCGCCAGC AGATCCTCAAGTCGCCGCATCTGGAGGCGTTCAAGGCCAAGGGCTACGAGGTGCTGCTGCTCACCGACCCGGTCGACGAG GTCTGGGTGGGAACCGTCACCGAGTTCGACGGCAAGCCGCTGCAGTCAATCGCCAAGGGCGAGGTGGACCTGAGCGCCGA GGGCGAGGAGAGCCAGGCCGAGCGGGATGAGCAGCAGAAGGAATTCGCCGATCTGCTCGCCTGGCTGAAGGACACCCTGT CCGACCACGTCAAGGAGGTCCGGCTGTCCAACCGACTGACCGACTCGCCGGCCTGCCTGATCACCGACGCCTTCGGCATC ACACCGGCGCTGGCCCGGCTCTACCGCGCCTCCGGGCAGGACATTCCGGTGGGCAAGCGAATACTGGAACTCAATCCCAA GCACCCACTGGTCACCGGCCTGCGCCAAGCCCACCAGGACCGCGCCGACGATCCGTCCGTCGCCGAGACCGCGGAATTGC TTTACGGCACAGCGCTTCTGGCCGAGGGCGGCGCCCTCGACGACCCGGCCCGGTTCGCCGAGATACTGGCCGACCGGTTG GCCCGCACCCTGTAG
Upstream 100 bases:
>100_bases GTCGAGCAACAGACATGGGTTCAGCGTAGGGCCAGCCCCCGGGCGGCGACCATCGATTACTCGGTAAATTTGAAACGTCA AGTTGTCGAAGGGGAATGCC
Downstream 100 bases:
>100_bases CCCCGGGCCGCCGCAGCAAATCGGCGAATTCGGGGATTGAAAAGCGCCGGGCAGGGATACTTAAGTCCCATGGCCGAGTT CCGCGTGATCGACCCGCACG
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G [H]
Number of amino acids: Translated: 644; Mature: 644
Protein sequence:
>644_residues MNARVEQLEFQAEARQLLDLMVHSVYSNKDSFLRELISNASDALDKLRLEAFRNKDLDVDTSDLHIQIEVDKDARTLTIR DNGIGMTRAEVVDLIGTLAKSGTAELRQQLREAKNAQNEAASEELIGQFGIGFYSSFMVADKVELLTRKAGESEATKWES SGEGTYTIESVENAPQGTSVTLHLKPEDTEDELHDYTSEFKIKSLVKKYSDFIAWPIRMEVERRTPATEEGGEETVTREV ETLNSMKALWARPKDEVSEEEYKEFYKHIAHAWDDPLEVIAMKAEGTFEYQALLFIPSHAPFDLFNRDAHTGIQLYVKRV FIMGDCDQLMPEYLRFVKGVVDAQDMSLNVSREILQQDRQIKAIRRRLTKKVLSTIKELQSERLDDYRTFWTQFGRVVKE GLLSDFDNQETLVQLCSFASTHSEEEATTLAQYVERMKEGQTQIFYATGETRQQILKSPHLEAFKAKGYEVLLLTDPVDE VWVGTVTEFDGKPLQSIAKGEVDLSAEGEESQAERDEQQKEFADLLAWLKDTLSDHVKEVRLSNRLTDSPACLITDAFGI TPALARLYRASGQDIPVGKRILELNPKHPLVTGLRQAHQDRADDPSVAETAELLYGTALLAEGGALDDPARFAEILADRL ARTL
Sequences:
>Translated_644_residues MNARVEQLEFQAEARQLLDLMVHSVYSNKDSFLRELISNASDALDKLRLEAFRNKDLDVDTSDLHIQIEVDKDARTLTIR DNGIGMTRAEVVDLIGTLAKSGTAELRQQLREAKNAQNEAASEELIGQFGIGFYSSFMVADKVELLTRKAGESEATKWES SGEGTYTIESVENAPQGTSVTLHLKPEDTEDELHDYTSEFKIKSLVKKYSDFIAWPIRMEVERRTPATEEGGEETVTREV ETLNSMKALWARPKDEVSEEEYKEFYKHIAHAWDDPLEVIAMKAEGTFEYQALLFIPSHAPFDLFNRDAHTGIQLYVKRV FIMGDCDQLMPEYLRFVKGVVDAQDMSLNVSREILQQDRQIKAIRRRLTKKVLSTIKELQSERLDDYRTFWTQFGRVVKE GLLSDFDNQETLVQLCSFASTHSEEEATTLAQYVERMKEGQTQIFYATGETRQQILKSPHLEAFKAKGYEVLLLTDPVDE VWVGTVTEFDGKPLQSIAKGEVDLSAEGEESQAERDEQQKEFADLLAWLKDTLSDHVKEVRLSNRLTDSPACLITDAFGI TPALARLYRASGQDIPVGKRILELNPKHPLVTGLRQAHQDRADDPSVAETAELLYGTALLAEGGALDDPARFAEILADRL ARTL >Mature_644_residues MNARVEQLEFQAEARQLLDLMVHSVYSNKDSFLRELISNASDALDKLRLEAFRNKDLDVDTSDLHIQIEVDKDARTLTIR DNGIGMTRAEVVDLIGTLAKSGTAELRQQLREAKNAQNEAASEELIGQFGIGFYSSFMVADKVELLTRKAGESEATKWES SGEGTYTIESVENAPQGTSVTLHLKPEDTEDELHDYTSEFKIKSLVKKYSDFIAWPIRMEVERRTPATEEGGEETVTREV ETLNSMKALWARPKDEVSEEEYKEFYKHIAHAWDDPLEVIAMKAEGTFEYQALLFIPSHAPFDLFNRDAHTGIQLYVKRV FIMGDCDQLMPEYLRFVKGVVDAQDMSLNVSREILQQDRQIKAIRRRLTKKVLSTIKELQSERLDDYRTFWTQFGRVVKE GLLSDFDNQETLVQLCSFASTHSEEEATTLAQYVERMKEGQTQIFYATGETRQQILKSPHLEAFKAKGYEVLLLTDPVDE VWVGTVTEFDGKPLQSIAKGEVDLSAEGEESQAERDEQQKEFADLLAWLKDTLSDHVKEVRLSNRLTDSPACLITDAFGI TPALARLYRASGQDIPVGKRILELNPKHPLVTGLRQAHQDRADDPSVAETAELLYGTALLAEGGALDDPARFAEILADRL ARTL
Specific function: Molecular chaperone. Has ATPase activity [H]
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family [H]
Homologues:
Organism=Homo sapiens, GI4507677, Length=690, Percent_Identity=38.5507246376812, Blast_Score=456, Evalue=1e-128, Organism=Homo sapiens, GI20149594, Length=672, Percent_Identity=38.6904761904762, Blast_Score=451, Evalue=1e-126, Organism=Homo sapiens, GI155722983, Length=656, Percent_Identity=31.859756097561, Blast_Score=332, Evalue=8e-91, Organism=Homo sapiens, GI154146191, Length=411, Percent_Identity=39.6593673965937, Blast_Score=309, Evalue=5e-84, Organism=Homo sapiens, GI153792590, Length=411, Percent_Identity=39.6593673965937, Blast_Score=305, Evalue=6e-83, Organism=Escherichia coli, GI1786679, Length=627, Percent_Identity=48.4848484848485, Blast_Score=571, Evalue=1e-164, Organism=Caenorhabditis elegans, GI17559162, Length=673, Percent_Identity=40.1188707280832, Blast_Score=470, Evalue=1e-133, Organism=Caenorhabditis elegans, GI17542208, Length=681, Percent_Identity=35.8296622613803, Blast_Score=417, Evalue=1e-116, Organism=Caenorhabditis elegans, GI115535205, Length=660, Percent_Identity=32.7272727272727, Blast_Score=319, Evalue=2e-87, Organism=Caenorhabditis elegans, GI115535167, Length=451, Percent_Identity=34.1463414634146, Blast_Score=250, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6323840, Length=675, Percent_Identity=39.2592592592593, Blast_Score=460, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6325016, Length=679, Percent_Identity=38.880706921944, Blast_Score=460, Evalue=1e-130, Organism=Drosophila melanogaster, GI17647529, Length=696, Percent_Identity=38.2183908045977, Blast_Score=479, Evalue=1e-135, Organism=Drosophila melanogaster, GI21357739, Length=688, Percent_Identity=36.046511627907, Blast_Score=404, Evalue=1e-112, Organism=Drosophila melanogaster, GI24586016, Length=661, Percent_Identity=32.9803328290469, Blast_Score=353, Evalue=2e-97,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 [H]
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90 [H]
EC number: NA
Molecular weight: Translated: 72829; Mature: 72829
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARVEQLEFQAEARQLLDLMVHSVYSNKDSFLRELISNASDALDKLRLEAFRNKDLDVD CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TSDLHIQIEVDKDARTLTIRDNGIGMTRAEVVDLIGTLAKSGTAELRQQLREAKNAQNEA CCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHH ASEELIGQFGIGFYSSFMVADKVELLTRKAGESEATKWESSGEGTYTIESVENAPQGTSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEECCCCCCCCCEE TLHLKPEDTEDELHDYTSEFKIKSLVKKYSDFIAWPIRMEVERRTPATEEGGEETVTREV EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHH ETLNSMKALWARPKDEVSEEEYKEFYKHIAHAWDDPLEVIAMKAEGTFEYQALLFIPSHA HHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHCCCCHHEEEEECCCCEEEEEEEEECCCC PFDLFNRDAHTGIQLYVKRVFIMGDCDQLMPEYLRFVKGVVDAQDMSLNVSREILQQDRQ CHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHH IKAIRRRLTKKVLSTIKELQSERLDDYRTFWTQFGRVVKEGLLSDFDNQETLVQLCSFAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH THSEEEATTLAQYVERMKEGQTQIFYATGETRQQILKSPHLEAFKAKGYEVLLLTDPVDE CCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCHHHHHCCCEEEEEEECCCHH VWVGTVTEFDGKPLQSIAKGEVDLSAEGEESQAERDEQQKEFADLLAWLKDTLSDHVKEV HHCCCHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLSNRLTDSPACLITDAFGITPALARLYRASGQDIPVGKRILELNPKHPLVTGLRQAHQD HHHHCCCCCCCEEEECHHCCCHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHC RADDPSVAETAELLYGTALLAEGGALDDPARFAEILADRLARTL CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MNARVEQLEFQAEARQLLDLMVHSVYSNKDSFLRELISNASDALDKLRLEAFRNKDLDVD CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TSDLHIQIEVDKDARTLTIRDNGIGMTRAEVVDLIGTLAKSGTAELRQQLREAKNAQNEA CCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHH ASEELIGQFGIGFYSSFMVADKVELLTRKAGESEATKWESSGEGTYTIESVENAPQGTSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEECCCCCCCCCEE TLHLKPEDTEDELHDYTSEFKIKSLVKKYSDFIAWPIRMEVERRTPATEEGGEETVTREV EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHH ETLNSMKALWARPKDEVSEEEYKEFYKHIAHAWDDPLEVIAMKAEGTFEYQALLFIPSHA HHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHCCCCHHEEEEECCCCEEEEEEEEECCCC PFDLFNRDAHTGIQLYVKRVFIMGDCDQLMPEYLRFVKGVVDAQDMSLNVSREILQQDRQ CHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHH IKAIRRRLTKKVLSTIKELQSERLDDYRTFWTQFGRVVKEGLLSDFDNQETLVQLCSFAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH THSEEEATTLAQYVERMKEGQTQIFYATGETRQQILKSPHLEAFKAKGYEVLLLTDPVDE CCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCHHHHHCCCEEEEEEECCCHH VWVGTVTEFDGKPLQSIAKGEVDLSAEGEESQAERDEQQKEFADLLAWLKDTLSDHVKEV HHCCCHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLSNRLTDSPACLITDAFGITPALARLYRASGQDIPVGKRILELNPKHPLVTGLRQAHQD HHHHCCCCCCCEEEECHHCCCHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHC RADDPSVAETAELLYGTALLAEGGALDDPARFAEILADRLARTL CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA