| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is cyp123 [H]
Identifier: 41408149
GI number: 41408149
Start: 2259674
End: 2260888
Strand: Reverse
Name: cyp123 [H]
Synonym: MAP2051c
Alternate gene names: 41408149
Gene position: 2260888-2259674 (Counterclockwise)
Preceding gene: 41408150
Following gene: 41408140
Centisome position: 46.81
GC content: 66.75
Gene sequence:
>1215_bases TTGGTTATGACAGGCACCAGCGCGATCGAGTTGTACTACGACCCTTTCGATTCCGGCATCGACGACAACCCGTACCCAGT GTGGCAGCGCATGCGCGAAGAAGCGCCGCTGTACTACAACGAGAAGTACAACTTCTACGCGCTGAGCCGCTACGAAGACG TGGCACGCGAATTGCCGAACTGGCAGACCTACCGATCCGGGCGGGGCACCACCGCCGACATCCTGTTCTCCAATGTCGAA GTGCCGCCGGGCATTCTGCTGTTCGAGGACCCGCCGCTGCACGACCTGCACCGCCGCCTGCTGTCGCGCGTCTTCACCCC GCGGCGGATGCTGGCCGTGGAGGACCTGGTGCGCGGATTCTGTGTCCGTGAGCTGGACCCGCTGGTGGGCGCCGGCGGCT TCGATTTCATCAGGGATCTGGGGGCGATGATGCCGATGCGCACCATCGGCTACCTGCTGGGCATCCCCGAGGAAGACCAG GAGAAGATCCGGGACCGCAGCGTCGCCAACATCGAGTTGTCCCGGGACAGTGATCCCGCCGCGGTGGACGCGAACGTGTT CGCCAACTCGATCGCGTTGTTCGCCGACTACATCGAGTGGCGGGCCGATCATCCCTCCGACGATCTGATGACCGAGCTGC TCCGAGCCGAGATCGACGAACCCGACGGCACCCGGCGCCCGCTGTCGCGCACCGAGGTGCTGGCCTACACCGCGATGATC GCCGGCGCCGGCAACGAGACCACCGCGCGTCTGATCGGTTTCATGGGACAGCTGCTCTCCGATCACCCGGATCAACGACG CGAACTCGCCGCCGACCCGTCGCTGATCCCCGGGGCGGTCGAGGAGACGCTGCGCTTCGAACCGCCGTCGCCGGTGCAGG CGCGATACGTGGCGCGGGACGCCGAGCACTACGGACGCGTCGTTCCGGAAGGGTCGTTCATGTTGCTGCTCAACGGTTCT GCGAACCGCGACCCGCGCCGCTTCACCGATCCCGACCGCTACGACATTCACCGGCAAGGGGGAGGCCACCTCAGCTTCGG GCAGGGCCTGCATTTCTGCCTCGGCTCGGCGCTGGCCCGAATGGAGGCGCGGGTGGCTTTCGAAGAGGTGCTCAAACGCT GGCCGGACTGGGAAGTCGACTACGCCAACGCCGAGCGCGCGCGCACCGCGAGCGTGCGCGGGTGGGCGCGGCTGCCGGTC GTCACCGGTGGTTAG
Upstream 100 bases:
>100_bases GGCCCGGGAAGTCATCGTCGACGAGCTCATCCAGGCCATCCTGCACGGCTTCCTGCACAGAAACGGCTGATCCGTTCAAT TGGCCACCGCACCAGAGGAA
Downstream 100 bases:
>100_bases CCCTCGACTGTCACGCCAGCGTGACGCTCGAGGTCGACCGTCACGCCAGCGTGACGCGCGAGGTCGACTGTCACGCTAGC GTGACGCTCGGCGGCTAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MVMTGTSAIELYYDPFDSGIDDNPYPVWQRMREEAPLYYNEKYNFYALSRYEDVARELPNWQTYRSGRGTTADILFSNVE VPPGILLFEDPPLHDLHRRLLSRVFTPRRMLAVEDLVRGFCVRELDPLVGAGGFDFIRDLGAMMPMRTIGYLLGIPEEDQ EKIRDRSVANIELSRDSDPAAVDANVFANSIALFADYIEWRADHPSDDLMTELLRAEIDEPDGTRRPLSRTEVLAYTAMI AGAGNETTARLIGFMGQLLSDHPDQRRELAADPSLIPGAVEETLRFEPPSPVQARYVARDAEHYGRVVPEGSFMLLLNGS ANRDPRRFTDPDRYDIHRQGGGHLSFGQGLHFCLGSALARMEARVAFEEVLKRWPDWEVDYANAERARTASVRGWARLPV VTGG
Sequences:
>Translated_404_residues MVMTGTSAIELYYDPFDSGIDDNPYPVWQRMREEAPLYYNEKYNFYALSRYEDVARELPNWQTYRSGRGTTADILFSNVE VPPGILLFEDPPLHDLHRRLLSRVFTPRRMLAVEDLVRGFCVRELDPLVGAGGFDFIRDLGAMMPMRTIGYLLGIPEEDQ EKIRDRSVANIELSRDSDPAAVDANVFANSIALFADYIEWRADHPSDDLMTELLRAEIDEPDGTRRPLSRTEVLAYTAMI AGAGNETTARLIGFMGQLLSDHPDQRRELAADPSLIPGAVEETLRFEPPSPVQARYVARDAEHYGRVVPEGSFMLLLNGS ANRDPRRFTDPDRYDIHRQGGGHLSFGQGLHFCLGSALARMEARVAFEEVLKRWPDWEVDYANAERARTASVRGWARLPV VTGG >Mature_404_residues MVMTGTSAIELYYDPFDSGIDDNPYPVWQRMREEAPLYYNEKYNFYALSRYEDVARELPNWQTYRSGRGTTADILFSNVE VPPGILLFEDPPLHDLHRRLLSRVFTPRRMLAVEDLVRGFCVRELDPLVGAGGFDFIRDLGAMMPMRTIGYLLGIPEEDQ EKIRDRSVANIELSRDSDPAAVDANVFANSIALFADYIEWRADHPSDDLMTELLRAEIDEPDGTRRPLSRTEVLAYTAMI AGAGNETTARLIGFMGQLLSDHPDQRRELAADPSLIPGAVEETLRFEPPSPVQARYVARDAEHYGRVVPEGSFMLLLNGS ANRDPRRFTDPDRYDIHRQGGGHLSFGQGLHFCLGSALARMEARVAFEEVLKRWPDWEVDYANAERARTASVRGWARLPV VTGG
Specific function: Unknown
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 45673; Mature: 45673
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMTGTSAIELYYDPFDSGIDDNPYPVWQRMREEAPLYYNEKYNFYALSRYEDVARELPN CEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEECCCCCEEEEHHHHHHHHHCCC WQTYRSGRGTTADILFSNVEVPPGILLFEDPPLHDLHRRLLSRVFTPRRMLAVEDLVRGF CHHHHCCCCCCHHHEEECCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH CVRELDPLVGAGGFDFIRDLGAMMPMRTIGYLLGIPEEDQEKIRDRSVANIELSRDSDPA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCCCCC AVDANVFANSIALFADYIEWRADHPSDDLMTELLRAEIDEPDGTRRPLSRTEVLAYTAMI EEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH AGAGNETTARLIGFMGQLLSDHPDQRRELAADPSLIPGAVEETLRFEPPSPVQARYVARD HCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHH AEHYGRVVPEGSFMLLLNGSANRDPRRFTDPDRYDIHRQGGGHLSFGQGLHFCLGSALAR HHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHH MEARVAFEEVLKRWPDWEVDYANAERARTASVRGWARLPVVTGG HHHHHHHHHHHHHCCCCCEECCCCHHHHHHCCCCCEECCEEECC >Mature Secondary Structure MVMTGTSAIELYYDPFDSGIDDNPYPVWQRMREEAPLYYNEKYNFYALSRYEDVARELPN CEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEECCCCCEEEEHHHHHHHHHCCC WQTYRSGRGTTADILFSNVEVPPGILLFEDPPLHDLHRRLLSRVFTPRRMLAVEDLVRGF CHHHHCCCCCCHHHEEECCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH CVRELDPLVGAGGFDFIRDLGAMMPMRTIGYLLGIPEEDQEKIRDRSVANIELSRDSDPA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCCCCC AVDANVFANSIALFADYIEWRADHPSDDLMTELLRAEIDEPDGTRRPLSRTEVLAYTAMI EEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH AGAGNETTARLIGFMGQLLSDHPDQRRELAADPSLIPGAVEETLRFEPPSPVQARYVARD HCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHH AEHYGRVVPEGSFMLLLNGSANRDPRRFTDPDRYDIHRQGGGHLSFGQGLHFCLGSALAR HHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHH MEARVAFEEVLKRWPDWEVDYANAERARTASVRGWARLPVVTGG HHHHHHHHHHHHHCCCCCEECCCCHHHHHHCCCCCEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]