| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408118
Identifier: 41408118
GI number: 41408118
Start: 2228363
End: 2229166
Strand: Direct
Name: 41408118
Synonym: MAP2020
Alternate gene names: NA
Gene position: 2228363-2229166 (Clockwise)
Preceding gene: 41408115
Following gene: 41408120
Centisome position: 46.14
GC content: 68.28
Gene sequence:
>804_bases TTGACAGGTTTGGGAGGGGCTTGCATGGGCATTTTCGACGGCATGTTCGCACGTCACATCGTTCGTTCTCTCGGTTCAGC ACTGGTCATGGCGGCCTCGGGTGTGGCCGCCTCGGCGGTGTCCGGTTCGGTCATCCCCACCGCCGCGGCGCAATGTCCGG ACATCCAGGTGGTGTTCGCGCGGGGCACCGGTGAAGCCCCCGGCGTCGGCCCCACGGGGCAAGCGTTTGTCGACGCCCTG CACCAGCGGGTGGGCGGGCGGTCCTTCGACGTCTACCCGGTCAACTACCCCGCGAGCGACCAGTGGGACACCGGCATCGA GGGCATCAGAGATGCGGGCGCACATGTGAATTCGATGGCGCACGACTGCCCCAACACCAAGATGGTGCTCGGCGGCTACT CGCAGGGCGCGGCCGTGATGGGCTTCGTCACCTCGGCCTCGGTGCCCGACGGCGTCGACCCCAACACCGTGCCCAAGCCG CTGGATCCCGAGGTCGCCAACCACGTCTCCTCGGTGGTGCTATTCGGCATGCCCAACGTGCGAGCGATGAATTTCCTGAA CGAGCCGCCGGTGGTCATCGGCCCCGCGTACCAGGACAAGACGCTGAAGGTGTGCGCCACCGAGGATCCGGTGTGCTCGG ACGGGATGAACTTCGCCGCGCACAACACCTACGCCAACGACAACGAAATGATCGACAAGGGCGTCGCGTTCGCCTCCAGC CACCTCGGCCTGGGCGGGCCGGCGACGGTGGCGGCGCCGAGCGGCGCGGTGGCGGCGCCGAGCGGCGGCGGCGTCGGCAG CTGA
Upstream 100 bases:
>100_bases CGCAATTGCGGCGTCGGTCCGATGGAGGCGACGCCGCCCCTATCCACCGTTCGTCGCCGCGCCCGGGCATACAGGAAAAT TTCATTAAACGGTCGGAAAC
Downstream 100 bases:
>100_bases GCAGCCGCTCGGCTAGCCCGACGCCGCTTTCGCGTTCAGGAAGGCGACGATTCCCGCGGTGACCGCGGCGGCGTATGCCG CCCGGCCATCGGGGCTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTGLGGACMGIFDGMFARHIVRSLGSALVMAASGVAASAVSGSVIPTAAAQCPDIQVVFARGTGEAPGVGPTGQAFVDAL HQRVGGRSFDVYPVNYPASDQWDTGIEGIRDAGAHVNSMAHDCPNTKMVLGGYSQGAAVMGFVTSASVPDGVDPNTVPKP LDPEVANHVSSVVLFGMPNVRAMNFLNEPPVVIGPAYQDKTLKVCATEDPVCSDGMNFAAHNTYANDNEMIDKGVAFASS HLGLGGPATVAAPSGAVAAPSGGGVGS
Sequences:
>Translated_267_residues MTGLGGACMGIFDGMFARHIVRSLGSALVMAASGVAASAVSGSVIPTAAAQCPDIQVVFARGTGEAPGVGPTGQAFVDAL HQRVGGRSFDVYPVNYPASDQWDTGIEGIRDAGAHVNSMAHDCPNTKMVLGGYSQGAAVMGFVTSASVPDGVDPNTVPKP LDPEVANHVSSVVLFGMPNVRAMNFLNEPPVVIGPAYQDKTLKVCATEDPVCSDGMNFAAHNTYANDNEMIDKGVAFASS HLGLGGPATVAAPSGAVAAPSGGGVGS >Mature_266_residues TGLGGACMGIFDGMFARHIVRSLGSALVMAASGVAASAVSGSVIPTAAAQCPDIQVVFARGTGEAPGVGPTGQAFVDALH QRVGGRSFDVYPVNYPASDQWDTGIEGIRDAGAHVNSMAHDCPNTKMVLGGYSQGAAVMGFVTSASVPDGVDPNTVPKPL DPEVANHVSSVVLFGMPNVRAMNFLNEPPVVIGPAYQDKTLKVCATEDPVCSDGMNFAAHNTYANDNEMIDKGVAFASSH LGLGGPATVAAPSGAVAAPSGGGVGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cutinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000675 - InterPro: IPR011150 [H]
Pfam domain/function: PF01083 Cutinase [H]
EC number: =3.1.1.74 [H]
Molecular weight: Translated: 26874; Mature: 26742
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLGGACMGIFDGMFARHIVRSLGSALVMAASGVAASAVSGSVIPTAAAQCPDIQVVFA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHCCCCCEEEEEE RGTGEAPGVGPTGQAFVDALHQRVGGRSFDVYPVNYPASDQWDTGIEGIRDAGAHVNSMA ECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH HDCPNTKMVLGGYSQGAAVMGFVTSASVPDGVDPNTVPKPLDPEVANHVSSVVLFGMPNV HCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCH RAMNFLNEPPVVIGPAYQDKTLKVCATEDPVCSDGMNFAAHNTYANDNEMIDKGVAFASS HHHHHCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHC HLGLGGPATVAAPSGAVAAPSGGGVGS CCCCCCCCEEECCCCCEECCCCCCCCC >Mature Secondary Structure TGLGGACMGIFDGMFARHIVRSLGSALVMAASGVAASAVSGSVIPTAAAQCPDIQVVFA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHCCCCCEEEEEE RGTGEAPGVGPTGQAFVDALHQRVGGRSFDVYPVNYPASDQWDTGIEGIRDAGAHVNSMA ECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH HDCPNTKMVLGGYSQGAAVMGFVTSASVPDGVDPNTVPKPLDPEVANHVSSVVLFGMPNV HCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCH RAMNFLNEPPVVIGPAYQDKTLKVCATEDPVCSDGMNFAAHNTYANDNEMIDKGVAFASS HHHHHCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHC HLGLGGPATVAAPSGAVAAPSGGGVGS CCCCCCCCEEECCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]