| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is aceE
Identifier: 41408092
GI number: 41408092
Start: 2198143
End: 2200932
Strand: Direct
Name: aceE
Synonym: MAP1994
Alternate gene names: 41408092
Gene position: 2198143-2200932 (Clockwise)
Preceding gene: 41408088
Following gene: 41408093
Centisome position: 45.51
GC content: 67.92
Gene sequence:
>2790_bases TTGACAACCGAATTCGTGCGCCACGATCTGGCCACAAACCCCACCGGCCCGGCCGAACCCGACCGCGTCCGGGTGATCCG CGAGGGGGTCGCGTCCTACCTCCCCGACATCGACCCGGAAGAGACGTCGGAGTGGCTGGAGTCCTTCGACGAACTGCTGG AGCGCTCCGGGCCGTCACGGGCCCGCTATCTGATGCTGCGGCTGCTGGAACGCGCCGGCGAGCAGCGGGTCGCCCTCCCG TCGCTGACCTCCACCGACTACGTCAACACCATTCCCACCGAACTCGAGCCGTGGTTCCCCGGCGACGAGGACGTCGAACG GCGCTACCGGGCGTGGATCCGGTGGAACGCCGCCATCATGGTGCACCGCGCGCAGCGGCCGGGAGTCGGTGTGGGCGGCC ACATTTCGACCTACGCGTCGTCGGCGGCGCTGTACGAAGTCGGCTTCAACCACTTCTTCCGCGGCAAGTCGCATCCCGGC GGCGGCGACCAGATCTTCATCCAGGGCCACGCCTCCCCGGGGATCTACGCGCGCGCCTTCCTGGAGGGCCGGTTGACCGC CGACCAACTCGACGGCTTCCGCCAGGAGCACAGCCACGCCGGCGGCGGCCTGCCGTCCTACCCGCACCCACGGCTGATGC CCGACTTCTGGGAATTCCCCACGGTGTCGATGGGCCTGGGCCCGCTGAACGCCATTTATCAGGCGCGGTTCAACCACTAC CTGCATGACCGCGGCATCAAGGACACCTCCGATCAGCACGTGTGGTGCTTCTTGGGCGACGGCGAGATGGACGAGCCGGA AAGCCGCGGTCTGATCCAGGTGGCCGCCAACGAGGCGCTGGACAACCTGACGTTCGTGATCAACTGCAACCTGCAGCGCC TCGACGGCCCGGTGCGCGGCAACGGCAAGATCATTCAGGAACTGGAGTCGTTCTTCCGCGGCGCCGGCTGGAACGTCATC AAGGTGGTCTGGGGCCGCGAGTGGGACGCCCTGCTGCACGCCGACCGGGACGGCGCGCTGGTGAACCTGATGAACACCAC GCCCGACGGGGATTACCAGACCTACAAGGCCAACGACGGCGCCTACGTGCGCGACCATTTCTTCGGCCGCGACCCGCGCA CCAAGGCGCTGGTGGAGAACATGACCGACGCCGAGATCTGGAACCTCAAGCGCGGCGGCCACGACTACCGCAAGGTGTAT GCCGCCTACCGGGCCGCCGTCGACCACAAGGGCCAGCCCACGGTGATCTTGGCCAAGACCATCAAGGGCTACTCGCTGGG CGCGCACTTCCAGGGCCGCAACGCCACGCATCAGATGAAAAAGCTTGCGCTGGAAGACCTCAAGCACTTCCGGGACGCGA TGCGCATTCCGATCAGCGACGCCCAGCTGGACGAGAATCCCTATCTGCCGCCCTACTACCACCCCGGCTCCGATGCCCCC GAGATCCGCTACATGCTCGACCGGCGCCGCACCCTGGGTGGCTTTCTGCCCGAACGCCGCACCAAGGCAAAGGCATTGAG GCTTCCCGGCCGCGACATCTACGCCGCACTGAAGAAGGGGTCGGGCACCCAGGAGGTCGCCACCACCATGGCGACGGTGC GCACCTTCAAAGAAGTATTGCGGGACAAGGAGATTGGCCCGCGGATCGTGCCGATCATTCCCGACGAGGCGCGCACCTTC GGCATGGACTCCTGGTTCCCGTCGCTGAAGATCTACAACCGCAACGGCCAGCTGTACACCGCCGTGGACGCCGAATTGAT GTTGGCGTACAAGGAAAGCGAAGTCGGGCAGATCCTGCACGAGGGCATCAACGAAGCCGGATCGGTGGGATCGTTCATCG CGGCCGGGACGTCGTATGCCACGCACAACGAGCCGATGATCCCGATCTACATCTTCTATTCGATGTTCGGCTTCCAGCGC ACCGGTGACGGGCTGTGGGCCGCCGCCGACCAGATGACACGCGGCTTCCTGCTCGGCGCGACGGCGGGGCGCACCACCCT GACCGGCGAGGGCCTGCAACACGCCGACGGCCACTCGCTGCTGCTGGCCGCCACCAACCCGGCCGTGGTCGCCTACGACC CGGCGTTCGCCTACGAGATCGCCTACATCGTGGAGAGCGGGCTGGCACGGATGTTCGGCGAGAACCCCGAGGACGTGTAC TTCTACATCACCGTCTACAACGAGCCGTACGTGCAGCCGCCGGAGCCGGAGAACTTCGATCCCGAGGGCCTGCTGCGCGG CCTCTACCGCTACCACGTGGCCACCGAACAGCGCGCCAACAAGGCGCAGATCCTGGCCTCCGGGGTGGCCATGCCGTCGG CGCTGAACGCGGCGAAGATGCTGGCCGACGAGTGGGACGTGGCCGCCGACGTGTGGTCGGTGACCAGCTGGGGCGAGTTG AACCGCGACGGCGTGGCGATCGACCGGGCCAGGCTGCGGCACCCGGACCGGCCCGCCGGCGTCCCCTACGTCACGCAGGC GCTGTCGGATGCCAGCGGGCCGGTGGTCGCCGTGTCGGACTGGATGCGGGCGGTTCCCGAGCAGATCCGGCCGTGGGTGC CGGGCACCTACGTGACGCTGGGCACCGACGGGTTCGGCTTCTCCGACACCCGGCCCGCGGCGCGGCGCTACTTCAACACC GACGCGGAGTCGCAGGTGGTCGCGGTGCTCGAGGCGCTGGCGCGCGACGGCGAGATCGACCCGTCGGTGCCGGTCGCCGC CGCACGCCAGTACCGCATCGACGACGTGCTGGCCGCCCCCGAGCAGACGTCCGACCCCGGCGTGGCCTAA
Upstream 100 bases:
>100_bases CAGACGTCGACTATCCGCGTCGAACACCGGTGCGGCACGATGGTGGTCGGGGTGCGAACCACCCCATGGCACACATCCCG CCAATTACAGGAGTAGTGGG
Downstream 100 bases:
>100_bases CGGCACCCGGGGCGGGGCGCCCACGCTCCCACCACCCCGCCGCGCCCACGCCCACCGCGCCTCCGCCGAGCGTGAAGTTA GCTTCACGGTCGGGGCCGAG
Product: pyruvate dehydrogenase subunit E1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 929; Mature: 928
Protein sequence:
>929_residues MTTEFVRHDLATNPTGPAEPDRVRVIREGVASYLPDIDPEETSEWLESFDELLERSGPSRARYLMLRLLERAGEQRVALP SLTSTDYVNTIPTELEPWFPGDEDVERRYRAWIRWNAAIMVHRAQRPGVGVGGHISTYASSAALYEVGFNHFFRGKSHPG GGDQIFIQGHASPGIYARAFLEGRLTADQLDGFRQEHSHAGGGLPSYPHPRLMPDFWEFPTVSMGLGPLNAIYQARFNHY LHDRGIKDTSDQHVWCFLGDGEMDEPESRGLIQVAANEALDNLTFVINCNLQRLDGPVRGNGKIIQELESFFRGAGWNVI KVVWGREWDALLHADRDGALVNLMNTTPDGDYQTYKANDGAYVRDHFFGRDPRTKALVENMTDAEIWNLKRGGHDYRKVY AAYRAAVDHKGQPTVILAKTIKGYSLGAHFQGRNATHQMKKLALEDLKHFRDAMRIPISDAQLDENPYLPPYYHPGSDAP EIRYMLDRRRTLGGFLPERRTKAKALRLPGRDIYAALKKGSGTQEVATTMATVRTFKEVLRDKEIGPRIVPIIPDEARTF GMDSWFPSLKIYNRNGQLYTAVDAELMLAYKESEVGQILHEGINEAGSVGSFIAAGTSYATHNEPMIPIYIFYSMFGFQR TGDGLWAAADQMTRGFLLGATAGRTTLTGEGLQHADGHSLLLAATNPAVVAYDPAFAYEIAYIVESGLARMFGENPEDVY FYITVYNEPYVQPPEPENFDPEGLLRGLYRYHVATEQRANKAQILASGVAMPSALNAAKMLADEWDVAADVWSVTSWGEL NRDGVAIDRARLRHPDRPAGVPYVTQALSDASGPVVAVSDWMRAVPEQIRPWVPGTYVTLGTDGFGFSDTRPAARRYFNT DAESQVVAVLEALARDGEIDPSVPVAAARQYRIDDVLAAPEQTSDPGVA
Sequences:
>Translated_929_residues MTTEFVRHDLATNPTGPAEPDRVRVIREGVASYLPDIDPEETSEWLESFDELLERSGPSRARYLMLRLLERAGEQRVALP SLTSTDYVNTIPTELEPWFPGDEDVERRYRAWIRWNAAIMVHRAQRPGVGVGGHISTYASSAALYEVGFNHFFRGKSHPG GGDQIFIQGHASPGIYARAFLEGRLTADQLDGFRQEHSHAGGGLPSYPHPRLMPDFWEFPTVSMGLGPLNAIYQARFNHY LHDRGIKDTSDQHVWCFLGDGEMDEPESRGLIQVAANEALDNLTFVINCNLQRLDGPVRGNGKIIQELESFFRGAGWNVI KVVWGREWDALLHADRDGALVNLMNTTPDGDYQTYKANDGAYVRDHFFGRDPRTKALVENMTDAEIWNLKRGGHDYRKVY AAYRAAVDHKGQPTVILAKTIKGYSLGAHFQGRNATHQMKKLALEDLKHFRDAMRIPISDAQLDENPYLPPYYHPGSDAP EIRYMLDRRRTLGGFLPERRTKAKALRLPGRDIYAALKKGSGTQEVATTMATVRTFKEVLRDKEIGPRIVPIIPDEARTF GMDSWFPSLKIYNRNGQLYTAVDAELMLAYKESEVGQILHEGINEAGSVGSFIAAGTSYATHNEPMIPIYIFYSMFGFQR TGDGLWAAADQMTRGFLLGATAGRTTLTGEGLQHADGHSLLLAATNPAVVAYDPAFAYEIAYIVESGLARMFGENPEDVY FYITVYNEPYVQPPEPENFDPEGLLRGLYRYHVATEQRANKAQILASGVAMPSALNAAKMLADEWDVAADVWSVTSWGEL NRDGVAIDRARLRHPDRPAGVPYVTQALSDASGPVVAVSDWMRAVPEQIRPWVPGTYVTLGTDGFGFSDTRPAARRYFNT DAESQVVAVLEALARDGEIDPSVPVAAARQYRIDDVLAAPEQTSDPGVA >Mature_928_residues TTEFVRHDLATNPTGPAEPDRVRVIREGVASYLPDIDPEETSEWLESFDELLERSGPSRARYLMLRLLERAGEQRVALPS LTSTDYVNTIPTELEPWFPGDEDVERRYRAWIRWNAAIMVHRAQRPGVGVGGHISTYASSAALYEVGFNHFFRGKSHPGG GDQIFIQGHASPGIYARAFLEGRLTADQLDGFRQEHSHAGGGLPSYPHPRLMPDFWEFPTVSMGLGPLNAIYQARFNHYL HDRGIKDTSDQHVWCFLGDGEMDEPESRGLIQVAANEALDNLTFVINCNLQRLDGPVRGNGKIIQELESFFRGAGWNVIK VVWGREWDALLHADRDGALVNLMNTTPDGDYQTYKANDGAYVRDHFFGRDPRTKALVENMTDAEIWNLKRGGHDYRKVYA AYRAAVDHKGQPTVILAKTIKGYSLGAHFQGRNATHQMKKLALEDLKHFRDAMRIPISDAQLDENPYLPPYYHPGSDAPE IRYMLDRRRTLGGFLPERRTKAKALRLPGRDIYAALKKGSGTQEVATTMATVRTFKEVLRDKEIGPRIVPIIPDEARTFG MDSWFPSLKIYNRNGQLYTAVDAELMLAYKESEVGQILHEGINEAGSVGSFIAAGTSYATHNEPMIPIYIFYSMFGFQRT GDGLWAAADQMTRGFLLGATAGRTTLTGEGLQHADGHSLLLAATNPAVVAYDPAFAYEIAYIVESGLARMFGENPEDVYF YITVYNEPYVQPPEPENFDPEGLLRGLYRYHVATEQRANKAQILASGVAMPSALNAAKMLADEWDVAADVWSVTSWGELN RDGVAIDRARLRHPDRPAGVPYVTQALSDASGPVVAVSDWMRAVPEQIRPWVPGTYVTLGTDGFGFSDTRPAARRYFNTD AESQVVAVLEALARDGEIDPSVPVAAARQYRIDDVLAAPEQTSDPGVA
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=882, Percent_Identity=52.4943310657596, Blast_Score=924, Evalue=0.0,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005474 [H]
Pfam domain/function: PF00456 Transketolase_N [H]
EC number: =1.2.4.1 [H]
Molecular weight: Translated: 103375; Mature: 103244
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEFVRHDLATNPTGPAEPDRVRVIREGVASYLPDIDPEETSEWLESFDELLERSGPSR CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHH ARYLMLRLLERAGEQRVALPSLTSTDYVNTIPTELEPWFPGDEDVERRYRAWIRWNAAIM HHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECEEEE VHRAQRPGVGVGGHISTYASSAALYEVGFNHFFRGKSHPGGGDQIFIQGHASPGIYARAF EEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEHH LEGRLTADQLDGFRQEHSHAGGGLPSYPHPRLMPDFWEFPTVSMGLGPLNAIYQARFNHY HHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHH LHDRGIKDTSDQHVWCFLGDGEMDEPESRGLIQVAANEALDNLTFVINCNLQRLDGPVRG HHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHCCEEEEEECCHHHCCCCCCC NGKIIQELESFFRGAGWNVIKVVWGREWDALLHADRDGALVNLMNTTPDGDYQTYKANDG CCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCC AYVRDHFFGRDPRTKALVENMTDAEIWNLKRGGHDYRKVYAAYRAAVDHKGQPTVILAKT CEEHHHCCCCCCCHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEC IKGYSLGAHFQGRNATHQMKKLALEDLKHFRDAMRIPISDAQLDENPYLPPYYHPGSDAP CCCCEECCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH EIRYMLDRRRTLGGFLPERRTKAKALRLPGRDIYAALKKGSGTQEVATTMATVRTFKEVL HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RDKEIGPRIVPIIPDEARTFGMDSWFPSLKIYNRNGQLYTAVDAELMLAYKESEVGQILH HCCCCCCEEEEECCCCHHHCCCCCCCCCEEEECCCCCEEEEECCEEEEEECHHHHHHHHH EGINEAGSVGSFIAAGTSYATHNEPMIPIYIFYSMFGFQRTGDGLWAAADQMTRGFLLGA HHHHHHCCCCHHHHCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEC TAGRTTLTGEGLQHADGHSLLLAATNPAVVAYDPAFAYEIAYIVESGLARMFGENPEDVY CCCCCEECCCCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEE FYITVYNEPYVQPPEPENFDPEGLLRGLYRYHVATEQRANKAQILASGVAMPSALNAAKM EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHH LADEWDVAADVWSVTSWGELNRDGVAIDRARLRHPDRPAGVPYVTQALSDASGPVVAVSD HHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHCCCCCCCCCHHHHHHHHCCCCCEEEHHH WMRAVPEQIRPWVPGTYVTLGTDGFGFSDTRPAARRYFNTDAESQVVAVLEALARDGEID HHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCC PSVPVAAARQYRIDDVLAAPEQTSDPGVA CCCCHHHHHHHCHHHHHCCCCCCCCCCCC >Mature Secondary Structure TTEFVRHDLATNPTGPAEPDRVRVIREGVASYLPDIDPEETSEWLESFDELLERSGPSR CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHH ARYLMLRLLERAGEQRVALPSLTSTDYVNTIPTELEPWFPGDEDVERRYRAWIRWNAAIM HHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECEEEE VHRAQRPGVGVGGHISTYASSAALYEVGFNHFFRGKSHPGGGDQIFIQGHASPGIYARAF EEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEHH LEGRLTADQLDGFRQEHSHAGGGLPSYPHPRLMPDFWEFPTVSMGLGPLNAIYQARFNHY HHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHH LHDRGIKDTSDQHVWCFLGDGEMDEPESRGLIQVAANEALDNLTFVINCNLQRLDGPVRG HHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHCCEEEEEECCHHHCCCCCCC NGKIIQELESFFRGAGWNVIKVVWGREWDALLHADRDGALVNLMNTTPDGDYQTYKANDG CCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCC AYVRDHFFGRDPRTKALVENMTDAEIWNLKRGGHDYRKVYAAYRAAVDHKGQPTVILAKT CEEHHHCCCCCCCHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEC IKGYSLGAHFQGRNATHQMKKLALEDLKHFRDAMRIPISDAQLDENPYLPPYYHPGSDAP CCCCEECCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH EIRYMLDRRRTLGGFLPERRTKAKALRLPGRDIYAALKKGSGTQEVATTMATVRTFKEVL HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RDKEIGPRIVPIIPDEARTFGMDSWFPSLKIYNRNGQLYTAVDAELMLAYKESEVGQILH HCCCCCCEEEEECCCCHHHCCCCCCCCCEEEECCCCCEEEEECCEEEEEECHHHHHHHHH EGINEAGSVGSFIAAGTSYATHNEPMIPIYIFYSMFGFQRTGDGLWAAADQMTRGFLLGA HHHHHHCCCCHHHHCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEC TAGRTTLTGEGLQHADGHSLLLAATNPAVVAYDPAFAYEIAYIVESGLARMFGENPEDVY CCCCCEECCCCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEE FYITVYNEPYVQPPEPENFDPEGLLRGLYRYHVATEQRANKAQILASGVAMPSALNAAKM EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHH LADEWDVAADVWSVTSWGELNRDGVAIDRARLRHPDRPAGVPYVTQALSDASGPVVAVSD HHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHCCCCCCCCCHHHHHHHHCCCCCEEEHHH WMRAVPEQIRPWVPGTYVTLGTDGFGFSDTRPAARRYFNTDAESQVVAVLEALARDGEID HHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCC PSVPVAAARQYRIDDVLAAPEQTSDPGVA CCCCHHHHHHHCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]