Click here to switch to the map view.

The map label for this gene is cbiZ [H]

Identifier: 41408088

GI number: 41408088

Start: 2195524

End: 2196324

Strand: Direct

Name: cbiZ [H]

Synonym: MAP1990

Alternate gene names: 41408088

Gene position: 2195524-2196324 (Clockwise)

Preceding gene: 41408086

Following gene: 41408092

Centisome position: 45.46

GC content: 76.15

Gene sequence:

>801_bases
ATGAGACCCGTGCATCCCCAGTTGACCGCGCGGGTCGAACACCATCGGTCGCTGCCGGTGCTGGTCTGGAGCTTCGCCGA
GCCCCGGCTGTGCATCTCGTCGGGCCCGCTCGGCGGCGGCATCGGCGCGCGGGACTGGTTGGTCAACGCCACGGTCCCGC
TCGATTACGACCGGACCGACCCCCACCGCCACCTGGTCGAAATCGGCGCCGCGCTGGGGCTCGCCGGCACCGGATGCGGG
CTGTTGACCGCGGTCGACGTGACCCGCCACCACCTCGGAGCCGACGGCGGCGTGCAGGTGACCGCGACGGTCGGGCTCTC
CAGCCCCGCCTGGGCGGCCGCGCCCGACCACCACTTCCGCCGCGAGGCGCCGCACCGGGTGGGGACGATCAACATCGTGG
TGGCGGCGCCGGTGCGGCTGTCGGAGGCGGCGTTGGTCAACGCCGTGGCCACCGCCACCGAGGCCAAGGCGCAGGCCTTG
CACGAGGCCGGGATTCGCGCCACCGGAACCGCCTCGGACGCGGTCGTCGTGCACTGCCCGACCGACGGGGCGGCGGAGGC
GTTCGGCGGGCCGCGCTCGACGTTCGGCGCCCGCATCGCGCGGGCGGTGCACGCCGCCGTGCTGGCCGGCGCGCGGTCCT
GGATGTCGGGCGCCGCCCACCGGCCACCGGCCGGGAACCCCACGCCGCCAAGGCATTTCGAGCCGGCTTCGGCGGCCGGC
TCCGCGCCGCGCGCGGCCGGCCGCCGGGCCGGTCATCGGGTGGGCGCGGACGGTATCGAACCGCCGACCGCTGGTGTGTA
A

Upstream 100 bases:

>100_bases
GAACGGTTTCACGCGTTCATAGTGCGCGAGTATGTGCCCACCGCGACGGTCGGGGCCCGAAATCCGGCCGGGTGACGCTC
GCTGACGCCCGCCCGCCAGG

Downstream 100 bases:

>100_bases
AACCAGAGCTCTACCACTGAGCTACGCGCCCCTGTGCAGGCCGCAGGCTACACGCCCGTCGGCCGGGACCCCAAACTTTC
AGGCCTTCAGCGCCGCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: AdoCbi hydrolase [H]

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MRPVHPQLTARVEHHRSLPVLVWSFAEPRLCISSGPLGGGIGARDWLVNATVPLDYDRTDPHRHLVEIGAALGLAGTGCG
LLTAVDVTRHHLGADGGVQVTATVGLSSPAWAAAPDHHFRREAPHRVGTINIVVAAPVRLSEAALVNAVATATEAKAQAL
HEAGIRATGTASDAVVVHCPTDGAAEAFGGPRSTFGARIARAVHAAVLAGARSWMSGAAHRPPAGNPTPPRHFEPASAAG
SAPRAAGRRAGHRVGADGIEPPTAGV

Sequences:

>Translated_266_residues
MRPVHPQLTARVEHHRSLPVLVWSFAEPRLCISSGPLGGGIGARDWLVNATVPLDYDRTDPHRHLVEIGAALGLAGTGCG
LLTAVDVTRHHLGADGGVQVTATVGLSSPAWAAAPDHHFRREAPHRVGTINIVVAAPVRLSEAALVNAVATATEAKAQAL
HEAGIRATGTASDAVVVHCPTDGAAEAFGGPRSTFGARIARAVHAAVLAGARSWMSGAAHRPPAGNPTPPRHFEPASAAG
SAPRAAGRRAGHRVGADGIEPPTAGV
>Mature_266_residues
MRPVHPQLTARVEHHRSLPVLVWSFAEPRLCISSGPLGGGIGARDWLVNATVPLDYDRTDPHRHLVEIGAALGLAGTGCG
LLTAVDVTRHHLGADGGVQVTATVGLSSPAWAAAPDHHFRREAPHRVGTINIVVAAPVRLSEAALVNAVATATEAKAQAL
HEAGIRATGTASDAVVVHCPTDGAAEAFGGPRSTFGARIARAVHAAVLAGARSWMSGAAHRPPAGNPTPPRHFEPASAAG
SAPRAAGRRAGHRVGADGIEPPTAGV

Specific function: Converts adenosylcobinamide (AdoCbi) to adenosylcobyric acid (AdoCby), an intermediate of the de novo coenzyme B12 biosynthetic route [H]

COG id: COG1865

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiZ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002808 [H]

Pfam domain/function: PF01955 CbiZ [H]

EC number: =3.5.1.90 [H]

Molecular weight: Translated: 27176; Mature: 27176

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPVHPQLTARVEHHRSLPVLVWSFAEPRLCISSGPLGGGIGARDWLVNATVPLDYDRTD
CCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCC
PHRHLVEIGAALGLAGTGCGLLTAVDVTRHHLGADGGVQVTATVGLSSPAWAAAPDHHFR
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHH
REAPHRVGTINIVVAAPVRLSEAALVNAVATATEAKAQALHEAGIRATGTASDAVVVHCP
HCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEECC
TDGAAEAFGGPRSTFGARIARAVHAAVLAGARSWMSGAAHRPPAGNPTPPRHFEPASAAG
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
SAPRAAGRRAGHRVGADGIEPPTAGV
CCCHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRPVHPQLTARVEHHRSLPVLVWSFAEPRLCISSGPLGGGIGARDWLVNATVPLDYDRTD
CCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCC
PHRHLVEIGAALGLAGTGCGLLTAVDVTRHHLGADGGVQVTATVGLSSPAWAAAPDHHFR
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHH
REAPHRVGTINIVVAAPVRLSEAALVNAVATATEAKAQALHEAGIRATGTASDAVVVHCP
HCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEECC
TDGAAEAFGGPRSTFGARIARAVHAAVLAGARSWMSGAAHRPPAGNPTPPRHFEPASAAG
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
SAPRAAGRRAGHRVGADGIEPPTAGV
CCCHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824 [H]