| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408087
Identifier: 41408087
GI number: 41408087
Start: 2194317
End: 2195522
Strand: Reverse
Name: 41408087
Synonym: MAP1989c
Alternate gene names: NA
Gene position: 2195522-2194317 (Counterclockwise)
Preceding gene: 41408089
Following gene: 41408085
Centisome position: 45.46
GC content: 69.73
Gene sequence:
>1206_bases CTGGCGGGCGGGCGTCAGCGAGCGTCACCCGGCCGGATTTCGGGCCCCGACCGTCGCGGTGGGCACATACTCGCGCACTA TGAACGCGTGAAACCGTTCCGCATCGATGTCCCCGACGACGTTCTCGACGACCTGCGCGCGCGGCTGGCCCGCACCCGGT GGCCCGAGGCCGAATGCGTGGACGACTGGAGCCAGGGCATGCCGCTGGCCTACACCCGCGAGCTGGCCGACTACTGGGCC AACGACTACGACTGGCGCGCGCGGGAAGCGGCGCTGAATCGCTTCGACCAGTTCGTCACCGAAATCGACGGCCTGGACAT CCATTTCATCCACCAGCGCTCGCCGCACGCCGACGCGTTCCCGCTGCTGATCACCCACGGCTGGCCGGGCTCGATCGTGG AGTTCCACAAGGTGATCGAGCCGTTGACCAACCCGGCGTCGGGGCGCGCCGAGGACGCCTTCCACGTCGTGTGCCCGTCG CTGCCGGGCTACGGCGTCTCCGGGAAACCCACCCGCGCGGGGTGGGGCGTGGAGCGGATCGCCCGGGCCTGGGAAACGCT GATGCTGCGCCTGGGCTATCAACGCTACGGCGCGCAGGGCGGCGACTGGGGCGCGGCGGTGACCACCCAGATCGGCCGCA ATCGCGGCCACTGCGTGGCCATCCACCTCAACATGCCGATCGGCAGGCCCGGCCAGCAGGCGCTGACCAACCCCACCGAG CAGGAGCGGGCGGCGTTGGCCGCGTTGGCGAATCACCGCAAGTGGGGCACCGGCTACTCCAAGCAGCAGTCCACCCGGCC GCAGACGCTGGGCTACGGCCTGGCCGATTCACCGGTGGGTCAGCTGGCCTGGATCGTCGAAAAGTTCTGGGACTGGGCCG ATTGCGACGGGCATCCGGAGAAAGCGTTGAGCCGCGACGAGCTGCTCGACAACGTGATGGTCTACTGGGTGACCAACACC GCCGCCTCCTCGGCCCGGCTGTACTGGGAGAGCTTCTCGGCGTGGGGCGGCGGGGACCGGGTCGAATTGCCCACCGGCGT CGCGGCTTTCCCCGGCGAACTGCTCAAGGCGCCGCGCTCCTGGTGCGAGCCGGCCTACAACATCACGCACTGGACGGACA TGCCGCGCGGCGGGCATTTCGCCGCGTTCGAGCAGCCGGAGCTGTTCGTCGAGGATCTGCGCGTGTTCTTCGCGACGGTG CGCTGA
Upstream 100 bases:
>100_bases CGAGATGCACAGCCGGGGCTCGGCGAAGCTCCAGACCAGCACCGGCAGCGACCGATGGTGTTCGACCCGCGCGGTCAACT GGGGATGCACGGGTCTCATC
Downstream 100 bases:
>100_bases GGGCGGGCTAGCTAGACCACCCGGCGGCCCTGGCGCGCCCGGGATCGCATGTCCCACAAGTAAATTCGATAGCCGAGGAT CCACACCCAGTGCGGGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: Epoxide hydratase [H]
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MAGGRQRASPGRISGPDRRGGHILAHYERVKPFRIDVPDDVLDDLRARLARTRWPEAECVDDWSQGMPLAYTRELADYWA NDYDWRAREAALNRFDQFVTEIDGLDIHFIHQRSPHADAFPLLITHGWPGSIVEFHKVIEPLTNPASGRAEDAFHVVCPS LPGYGVSGKPTRAGWGVERIARAWETLMLRLGYQRYGAQGGDWGAAVTTQIGRNRGHCVAIHLNMPIGRPGQQALTNPTE QERAALAALANHRKWGTGYSKQQSTRPQTLGYGLADSPVGQLAWIVEKFWDWADCDGHPEKALSRDELLDNVMVYWVTNT AASSARLYWESFSAWGGGDRVELPTGVAAFPGELLKAPRSWCEPAYNITHWTDMPRGGHFAAFEQPELFVEDLRVFFATV R
Sequences:
>Translated_401_residues MAGGRQRASPGRISGPDRRGGHILAHYERVKPFRIDVPDDVLDDLRARLARTRWPEAECVDDWSQGMPLAYTRELADYWA NDYDWRAREAALNRFDQFVTEIDGLDIHFIHQRSPHADAFPLLITHGWPGSIVEFHKVIEPLTNPASGRAEDAFHVVCPS LPGYGVSGKPTRAGWGVERIARAWETLMLRLGYQRYGAQGGDWGAAVTTQIGRNRGHCVAIHLNMPIGRPGQQALTNPTE QERAALAALANHRKWGTGYSKQQSTRPQTLGYGLADSPVGQLAWIVEKFWDWADCDGHPEKALSRDELLDNVMVYWVTNT AASSARLYWESFSAWGGGDRVELPTGVAAFPGELLKAPRSWCEPAYNITHWTDMPRGGHFAAFEQPELFVEDLRVFFATV R >Mature_400_residues AGGRQRASPGRISGPDRRGGHILAHYERVKPFRIDVPDDVLDDLRARLARTRWPEAECVDDWSQGMPLAYTRELADYWAN DYDWRAREAALNRFDQFVTEIDGLDIHFIHQRSPHADAFPLLITHGWPGSIVEFHKVIEPLTNPASGRAEDAFHVVCPSL PGYGVSGKPTRAGWGVERIARAWETLMLRLGYQRYGAQGGDWGAAVTTQIGRNRGHCVAIHLNMPIGRPGQQALTNPTEQ ERAALAALANHRKWGTGYSKQQSTRPQTLGYGLADSPVGQLAWIVEKFWDWADCDGHPEKALSRDELLDNVMVYWVTNTA ASSARLYWESFSAWGGGDRVELPTGVAAFPGELLKAPRSWCEPAYNITHWTDMPRGGHFAAFEQPELFVEDLRVFFATVR
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
Organism=Homo sapiens, GI4503583, Length=407, Percent_Identity=37.3464373464373, Blast_Score=274, Evalue=1e-73, Organism=Homo sapiens, GI209862837, Length=407, Percent_Identity=37.3464373464373, Blast_Score=274, Evalue=1e-73, Organism=Caenorhabditis elegans, GI17564944, Length=406, Percent_Identity=39.1625615763547, Blast_Score=263, Evalue=1e-70, Organism=Caenorhabditis elegans, GI193207462, Length=411, Percent_Identity=27.7372262773723, Blast_Score=135, Evalue=3e-32, Organism=Drosophila melanogaster, GI20130139, Length=405, Percent_Identity=35.0617283950617, Blast_Score=207, Evalue=7e-54, Organism=Drosophila melanogaster, GI24655327, Length=407, Percent_Identity=33.6609336609337, Blast_Score=202, Evalue=2e-52, Organism=Drosophila melanogaster, GI19922580, Length=410, Percent_Identity=33.1707317073171, Blast_Score=198, Evalue=6e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =3.3.2.10 [H]
Molecular weight: Translated: 44969; Mature: 44838
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGGRQRASPGRISGPDRRGGHILAHYERVKPFRIDVPDDVLDDLRARLARTRWPEAECV CCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCEECCCCHHHHHHHHHHHHHCCCCCHHHH DDWSQGMPLAYTRELADYWANDYDWRAREAALNRFDQFVTEIDGLDIHFIHQRSPHADAF HHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC PLLITHGWPGSIVEFHKVIEPLTNPASGRAEDAFHVVCPSLPGYGVSGKPTRAGWGVERI EEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHH ARAWETLMLRLGYQRYGAQGGDWGAAVTTQIGRNRGHCVAIHLNMPIGRPGQQALTNPTE HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHCCCCH QERAALAALANHRKWGTGYSKQQSTRPQTLGYGLADSPVGQLAWIVEKFWDWADCDGHPE HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHH KALSRDELLDNVMVYWVTNTAASSARLYWESFSAWGGGDRVELPTGVAAFPGELLKAPRS HHCCHHHHHHCEEEEEEECCCCCHHHHHHHHHCCCCCCCEEECCCCCHHCCHHHHHCCHH WCEPAYNITHWTDMPRGGHFAAFEQPELFVEDLRVFFATVR HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure AGGRQRASPGRISGPDRRGGHILAHYERVKPFRIDVPDDVLDDLRARLARTRWPEAECV CCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCEECCCCHHHHHHHHHHHHHCCCCCHHHH DDWSQGMPLAYTRELADYWANDYDWRAREAALNRFDQFVTEIDGLDIHFIHQRSPHADAF HHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC PLLITHGWPGSIVEFHKVIEPLTNPASGRAEDAFHVVCPSLPGYGVSGKPTRAGWGVERI EEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHH ARAWETLMLRLGYQRYGAQGGDWGAAVTTQIGRNRGHCVAIHLNMPIGRPGQQALTNPTE HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHCCCCH QERAALAALANHRKWGTGYSKQQSTRPQTLGYGLADSPVGQLAWIVEKFWDWADCDGHPE HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHH KALSRDELLDNVMVYWVTNTAASSARLYWESFSAWGGGDRVELPTGVAAFPGELLKAPRS HHCCHHHHHHCEEEEEEECCCCCHHHHHHHHHCCCCCCCEEECCCCCHHCCHHHHHCCHH WCEPAYNITHWTDMPRGGHFAAFEQPELFVEDLRVFFATVR HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226695 [H]