Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41408087

Identifier: 41408087

GI number: 41408087

Start: 2194317

End: 2195522

Strand: Reverse

Name: 41408087

Synonym: MAP1989c

Alternate gene names: NA

Gene position: 2195522-2194317 (Counterclockwise)

Preceding gene: 41408089

Following gene: 41408085

Centisome position: 45.46

GC content: 69.73

Gene sequence:

>1206_bases
CTGGCGGGCGGGCGTCAGCGAGCGTCACCCGGCCGGATTTCGGGCCCCGACCGTCGCGGTGGGCACATACTCGCGCACTA
TGAACGCGTGAAACCGTTCCGCATCGATGTCCCCGACGACGTTCTCGACGACCTGCGCGCGCGGCTGGCCCGCACCCGGT
GGCCCGAGGCCGAATGCGTGGACGACTGGAGCCAGGGCATGCCGCTGGCCTACACCCGCGAGCTGGCCGACTACTGGGCC
AACGACTACGACTGGCGCGCGCGGGAAGCGGCGCTGAATCGCTTCGACCAGTTCGTCACCGAAATCGACGGCCTGGACAT
CCATTTCATCCACCAGCGCTCGCCGCACGCCGACGCGTTCCCGCTGCTGATCACCCACGGCTGGCCGGGCTCGATCGTGG
AGTTCCACAAGGTGATCGAGCCGTTGACCAACCCGGCGTCGGGGCGCGCCGAGGACGCCTTCCACGTCGTGTGCCCGTCG
CTGCCGGGCTACGGCGTCTCCGGGAAACCCACCCGCGCGGGGTGGGGCGTGGAGCGGATCGCCCGGGCCTGGGAAACGCT
GATGCTGCGCCTGGGCTATCAACGCTACGGCGCGCAGGGCGGCGACTGGGGCGCGGCGGTGACCACCCAGATCGGCCGCA
ATCGCGGCCACTGCGTGGCCATCCACCTCAACATGCCGATCGGCAGGCCCGGCCAGCAGGCGCTGACCAACCCCACCGAG
CAGGAGCGGGCGGCGTTGGCCGCGTTGGCGAATCACCGCAAGTGGGGCACCGGCTACTCCAAGCAGCAGTCCACCCGGCC
GCAGACGCTGGGCTACGGCCTGGCCGATTCACCGGTGGGTCAGCTGGCCTGGATCGTCGAAAAGTTCTGGGACTGGGCCG
ATTGCGACGGGCATCCGGAGAAAGCGTTGAGCCGCGACGAGCTGCTCGACAACGTGATGGTCTACTGGGTGACCAACACC
GCCGCCTCCTCGGCCCGGCTGTACTGGGAGAGCTTCTCGGCGTGGGGCGGCGGGGACCGGGTCGAATTGCCCACCGGCGT
CGCGGCTTTCCCCGGCGAACTGCTCAAGGCGCCGCGCTCCTGGTGCGAGCCGGCCTACAACATCACGCACTGGACGGACA
TGCCGCGCGGCGGGCATTTCGCCGCGTTCGAGCAGCCGGAGCTGTTCGTCGAGGATCTGCGCGTGTTCTTCGCGACGGTG
CGCTGA

Upstream 100 bases:

>100_bases
CGAGATGCACAGCCGGGGCTCGGCGAAGCTCCAGACCAGCACCGGCAGCGACCGATGGTGTTCGACCCGCGCGGTCAACT
GGGGATGCACGGGTCTCATC

Downstream 100 bases:

>100_bases
GGGCGGGCTAGCTAGACCACCCGGCGGCCCTGGCGCGCCCGGGATCGCATGTCCCACAAGTAAATTCGATAGCCGAGGAT
CCACACCCAGTGCGGGATCA

Product: hypothetical protein

Products: NA

Alternate protein names: Epoxide hydratase [H]

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MAGGRQRASPGRISGPDRRGGHILAHYERVKPFRIDVPDDVLDDLRARLARTRWPEAECVDDWSQGMPLAYTRELADYWA
NDYDWRAREAALNRFDQFVTEIDGLDIHFIHQRSPHADAFPLLITHGWPGSIVEFHKVIEPLTNPASGRAEDAFHVVCPS
LPGYGVSGKPTRAGWGVERIARAWETLMLRLGYQRYGAQGGDWGAAVTTQIGRNRGHCVAIHLNMPIGRPGQQALTNPTE
QERAALAALANHRKWGTGYSKQQSTRPQTLGYGLADSPVGQLAWIVEKFWDWADCDGHPEKALSRDELLDNVMVYWVTNT
AASSARLYWESFSAWGGGDRVELPTGVAAFPGELLKAPRSWCEPAYNITHWTDMPRGGHFAAFEQPELFVEDLRVFFATV
R

Sequences:

>Translated_401_residues
MAGGRQRASPGRISGPDRRGGHILAHYERVKPFRIDVPDDVLDDLRARLARTRWPEAECVDDWSQGMPLAYTRELADYWA
NDYDWRAREAALNRFDQFVTEIDGLDIHFIHQRSPHADAFPLLITHGWPGSIVEFHKVIEPLTNPASGRAEDAFHVVCPS
LPGYGVSGKPTRAGWGVERIARAWETLMLRLGYQRYGAQGGDWGAAVTTQIGRNRGHCVAIHLNMPIGRPGQQALTNPTE
QERAALAALANHRKWGTGYSKQQSTRPQTLGYGLADSPVGQLAWIVEKFWDWADCDGHPEKALSRDELLDNVMVYWVTNT
AASSARLYWESFSAWGGGDRVELPTGVAAFPGELLKAPRSWCEPAYNITHWTDMPRGGHFAAFEQPELFVEDLRVFFATV
R
>Mature_400_residues
AGGRQRASPGRISGPDRRGGHILAHYERVKPFRIDVPDDVLDDLRARLARTRWPEAECVDDWSQGMPLAYTRELADYWAN
DYDWRAREAALNRFDQFVTEIDGLDIHFIHQRSPHADAFPLLITHGWPGSIVEFHKVIEPLTNPASGRAEDAFHVVCPSL
PGYGVSGKPTRAGWGVERIARAWETLMLRLGYQRYGAQGGDWGAAVTTQIGRNRGHCVAIHLNMPIGRPGQQALTNPTEQ
ERAALAALANHRKWGTGYSKQQSTRPQTLGYGLADSPVGQLAWIVEKFWDWADCDGHPEKALSRDELLDNVMVYWVTNTA
ASSARLYWESFSAWGGGDRVELPTGVAAFPGELLKAPRSWCEPAYNITHWTDMPRGGHFAAFEQPELFVEDLRVFFATVR

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S33 family [H]

Homologues:

Organism=Homo sapiens, GI4503583, Length=407, Percent_Identity=37.3464373464373, Blast_Score=274, Evalue=1e-73,
Organism=Homo sapiens, GI209862837, Length=407, Percent_Identity=37.3464373464373, Blast_Score=274, Evalue=1e-73,
Organism=Caenorhabditis elegans, GI17564944, Length=406, Percent_Identity=39.1625615763547, Blast_Score=263, Evalue=1e-70,
Organism=Caenorhabditis elegans, GI193207462, Length=411, Percent_Identity=27.7372262773723, Blast_Score=135, Evalue=3e-32,
Organism=Drosophila melanogaster, GI20130139, Length=405, Percent_Identity=35.0617283950617, Blast_Score=207, Evalue=7e-54,
Organism=Drosophila melanogaster, GI24655327, Length=407, Percent_Identity=33.6609336609337, Blast_Score=202, Evalue=2e-52,
Organism=Drosophila melanogaster, GI19922580, Length=410, Percent_Identity=33.1707317073171, Blast_Score=198, Evalue=6e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: =3.3.2.10 [H]

Molecular weight: Translated: 44969; Mature: 44838

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGRQRASPGRISGPDRRGGHILAHYERVKPFRIDVPDDVLDDLRARLARTRWPEAECV
CCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCEECCCCHHHHHHHHHHHHHCCCCCHHHH
DDWSQGMPLAYTRELADYWANDYDWRAREAALNRFDQFVTEIDGLDIHFIHQRSPHADAF
HHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC
PLLITHGWPGSIVEFHKVIEPLTNPASGRAEDAFHVVCPSLPGYGVSGKPTRAGWGVERI
EEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHH
ARAWETLMLRLGYQRYGAQGGDWGAAVTTQIGRNRGHCVAIHLNMPIGRPGQQALTNPTE
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHCCCCH
QERAALAALANHRKWGTGYSKQQSTRPQTLGYGLADSPVGQLAWIVEKFWDWADCDGHPE
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHH
KALSRDELLDNVMVYWVTNTAASSARLYWESFSAWGGGDRVELPTGVAAFPGELLKAPRS
HHCCHHHHHHCEEEEEEECCCCCHHHHHHHHHCCCCCCCEEECCCCCHHCCHHHHHCCHH
WCEPAYNITHWTDMPRGGHFAAFEQPELFVEDLRVFFATVR
HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGGRQRASPGRISGPDRRGGHILAHYERVKPFRIDVPDDVLDDLRARLARTRWPEAECV
CCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCEECCCCHHHHHHHHHHHHHCCCCCHHHH
DDWSQGMPLAYTRELADYWANDYDWRAREAALNRFDQFVTEIDGLDIHFIHQRSPHADAF
HHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC
PLLITHGWPGSIVEFHKVIEPLTNPASGRAEDAFHVVCPSLPGYGVSGKPTRAGWGVERI
EEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHH
ARAWETLMLRLGYQRYGAQGGDWGAAVTTQIGRNRGHCVAIHLNMPIGRPGQQALTNPTE
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHCCCCH
QERAALAALANHRKWGTGYSKQQSTRPQTLGYGLADSPVGQLAWIVEKFWDWADCDGHPE
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHH
KALSRDELLDNVMVYWVTNTAASSARLYWESFSAWGGGDRVELPTGVAAFPGELLKAPRS
HHCCHHHHHHCEEEEEEECCCCCHHHHHHHHHCCCCCCCEEECCCCCHHCCHHHHHCCHH
WCEPAYNITHWTDMPRGGHFAAFEQPELFVEDLRVFFATVR
HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8226695 [H]