| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is cyp143 [H]
Identifier: 41408077
GI number: 41408077
Start: 2185004
End: 2186173
Strand: Direct
Name: cyp143 [H]
Synonym: MAP1979
Alternate gene names: 41408077
Gene position: 2185004-2186173 (Clockwise)
Preceding gene: 41408076
Following gene: 41408082
Centisome position: 45.24
GC content: 68.12
Gene sequence:
>1170_bases ATGACCGAAGCCGGAGGTTTCGTCGACCAGACCGTCACCGGAGTCGCGGAGCCGCAACCGATGTACAAGGCGCTGCGCGA GTCCAACCCGGTGTTCCGGTCCACGCAGGCGGTGGTGCTCAGCCGCCTCGCCGACATCGAGATGGCGCTCAAGCACACCG AACTGTTTTCGTCGAACATGGACGCGGTCGACCTGGGCAACGTGCGGCCGCTGATCCCGCTGCAGATCGACCCGCCCGAC CATGCCAAGTACCGCCGCATCCTCGACCCGCTGTTCACCCCGCGCGAGATGGCCCGCCGCGAACCGCTCGTCACCGAGCT GGTCAACGAGATGATCGACCGGTTCGCCCCGCGGGGCGAATGCGACTTCCACGCCGAGTTCGCGGTTCCCCTGCCGTGCA CGGTGTTCCTGCAGCTGCTGGGTCTGCCGCTGGAGGACCTCGACCGATTTCTGCTGTGGAAGGACGGGGTGATCCGCCCG GCGGGCGACTCGGGGTTCGACCGCCGCCACGAGAGCTCCGCCGGTGTGGCCCAACAGATCTACGAGTACTTCGACAAGGC CATCGACGAGCACATCGCGGTCCCGCGTGACGACGTGCTGTCCGCGATGATCGCCGCCGACGTGGGCGGGCAGCCGCTGT CCCGCGAGGAGCTGCTCGACATCTGCTTCCTGTTCCTGATCGCCGGTCTGGACACCGTCACCGACTCGCTGGACTGCTTT TTCGTCTACCTGGCGCGCCACCCCCAGCACCGTCGTCAGCTTGTCGAGCGGCCCGACGTGCTGCCCGGCGCCGTCGAGGA GCTGTTGCGTTGGGAGACACCGGTTCCCGGTGTCGCTCGCGTCGCAACGCAAGACGTCGAGGTCGGCGGCTGCCCGATCA GCAAGGGCGAACGGGTCAGCCCGCTGCTCGGCGCGGCCAACACCGACCCGGCCGAGTTCCCCGACCCCGAGATCGTCGAC TTCACCCGCAGCCCCAACCGGCACCGGGCCTTCGGCGGCGGCCCGCATCGCTGCCTCGGCTCTCATCTGGCCCGCATGGA GCTGCGCGTGGCGCTTCGCGAATTCCATAGGCGCATACCGGATTACGAGATCAGACCGGGCACGCAGCTGACCTACACCG CCGCGCTGAGGTCGGTGGAGTCGCTGCCGCTGGTCTTCCCAGTGCGATGA
Upstream 100 bases:
>100_bases AGGCCATCGTCATCTTCGGACCGCACGGCGAGCGGCTGCACCTGCACAGTTAGCCGGCCACGCCATTGCCTGGCGCCGAC GATGGTGCCAGGCTGACCCA
Downstream 100 bases:
>100_bases GGGCGCGATGAGGCGCGTCGTCGTCGACGCCGAGCGCTGCACCGGCCACGGACGCTGTTACACCCTGGCGCCCGACGTCT TCGACGCCGACGAGTTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MTEAGGFVDQTVTGVAEPQPMYKALRESNPVFRSTQAVVLSRLADIEMALKHTELFSSNMDAVDLGNVRPLIPLQIDPPD HAKYRRILDPLFTPREMARREPLVTELVNEMIDRFAPRGECDFHAEFAVPLPCTVFLQLLGLPLEDLDRFLLWKDGVIRP AGDSGFDRRHESSAGVAQQIYEYFDKAIDEHIAVPRDDVLSAMIAADVGGQPLSREELLDICFLFLIAGLDTVTDSLDCF FVYLARHPQHRRQLVERPDVLPGAVEELLRWETPVPGVARVATQDVEVGGCPISKGERVSPLLGAANTDPAEFPDPEIVD FTRSPNRHRAFGGGPHRCLGSHLARMELRVALREFHRRIPDYEIRPGTQLTYTAALRSVESLPLVFPVR
Sequences:
>Translated_389_residues MTEAGGFVDQTVTGVAEPQPMYKALRESNPVFRSTQAVVLSRLADIEMALKHTELFSSNMDAVDLGNVRPLIPLQIDPPD HAKYRRILDPLFTPREMARREPLVTELVNEMIDRFAPRGECDFHAEFAVPLPCTVFLQLLGLPLEDLDRFLLWKDGVIRP AGDSGFDRRHESSAGVAQQIYEYFDKAIDEHIAVPRDDVLSAMIAADVGGQPLSREELLDICFLFLIAGLDTVTDSLDCF FVYLARHPQHRRQLVERPDVLPGAVEELLRWETPVPGVARVATQDVEVGGCPISKGERVSPLLGAANTDPAEFPDPEIVD FTRSPNRHRAFGGGPHRCLGSHLARMELRVALREFHRRIPDYEIRPGTQLTYTAALRSVESLPLVFPVR >Mature_388_residues TEAGGFVDQTVTGVAEPQPMYKALRESNPVFRSTQAVVLSRLADIEMALKHTELFSSNMDAVDLGNVRPLIPLQIDPPDH AKYRRILDPLFTPREMARREPLVTELVNEMIDRFAPRGECDFHAEFAVPLPCTVFLQLLGLPLEDLDRFLLWKDGVIRPA GDSGFDRRHESSAGVAQQIYEYFDKAIDEHIAVPRDDVLSAMIAADVGGQPLSREELLDICFLFLIAGLDTVTDSLDCFF VYLARHPQHRRQLVERPDVLPGAVEELLRWETPVPGVARVATQDVEVGGCPISKGERVSPLLGAANTDPAEFPDPEIVDF TRSPNRHRAFGGGPHRCLGSHLARMELRVALREFHRRIPDYEIRPGTQLTYTAALRSVESLPLVFPVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
Organism=Homo sapiens, GI195972896, Length=171, Percent_Identity=29.8245614035088, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI195972898, Length=171, Percent_Identity=29.8245614035088, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI261278372, Length=171, Percent_Identity=29.8245614035088, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI261278370, Length=171, Percent_Identity=29.8245614035088, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI119220562, Length=185, Percent_Identity=29.1891891891892, Blast_Score=66, Evalue=5e-11, Organism=Homo sapiens, GI6005737, Length=185, Percent_Identity=29.1891891891892, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI24642101, Length=180, Percent_Identity=28.3333333333333, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI18079270, Length=245, Percent_Identity=24.8979591836735, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI21355669, Length=216, Percent_Identity=26.3888888888889, Blast_Score=65, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 43529; Mature: 43398
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAGGFVDQTVTGVAEPQPMYKALRESNPVFRSTQAVVLSRLADIEMALKHTELFSSNM CCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DAVDLGNVRPLIPLQIDPPDHAKYRRILDPLFTPREMARREPLVTELVNEMIDRFAPRGE CCEECCCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCCCCC CDFHAEFAVPLPCTVFLQLLGLPLEDLDRFLLWKDGVIRPAGDSGFDRRHESSAGVAQQI CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHH YEYFDKAIDEHIAVPRDDVLSAMIAADVGGQPLSREELLDICFLFLIAGLDTVTDSLDCF HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FVYLARHPQHRRQLVERPDVLPGAVEELLRWETPVPGVARVATQDVEVGGCPISKGERVS HHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC PLLGAANTDPAEFPDPEIVDFTRSPNRHRAFGGGPHRCLGSHLARMELRVALREFHRRIP HHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC DYEIRPGTQLTYTAALRSVESLPLVFPVR CCCCCCCCCCHHHHHHHHHHHCCCEECCC >Mature Secondary Structure TEAGGFVDQTVTGVAEPQPMYKALRESNPVFRSTQAVVLSRLADIEMALKHTELFSSNM CCCCCCHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DAVDLGNVRPLIPLQIDPPDHAKYRRILDPLFTPREMARREPLVTELVNEMIDRFAPRGE CCEECCCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCCCCC CDFHAEFAVPLPCTVFLQLLGLPLEDLDRFLLWKDGVIRPAGDSGFDRRHESSAGVAQQI CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHH YEYFDKAIDEHIAVPRDDVLSAMIAADVGGQPLSREELLDICFLFLIAGLDTVTDSLDCF HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FVYLARHPQHRRQLVERPDVLPGAVEELLRWETPVPGVARVATQDVEVGGCPISKGERVS HHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC PLLGAANTDPAEFPDPEIVDFTRSPNRHRAFGGGPHRCLGSHLARMELRVALREFHRRIP HHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC DYEIRPGTQLTYTAALRSVESLPLVFPVR CCCCCCCCCCHHHHHHHHHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]