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The map label for this gene is 41408076

Identifier: 41408076

GI number: 41408076

Start: 2184387

End: 2184956

Strand: Direct

Name: 41408076

Synonym: MAP1978

Alternate gene names: NA

Gene position: 2184387-2184956 (Clockwise)

Preceding gene: 41408074

Following gene: 41408077

Centisome position: 45.23

GC content: 73.33

Gene sequence:

>570_bases
ATGCAGGCAAACACCGACATCGACGTCCAGGTGCGCCGGCGGCTGCGGGAGCTGCGCGTGCAGCGCGGCCTGACGTTGCA
GGAGGTGGGTGCGCGGGCGGGGATCGACGTGTCGACGCTGAGCCGCCTGGAGTCCGGGAAGCGCCGGCTGGCGCTGGATC
ACCTGCCGCGGCTGGCCCGGGCGCTCTCGGTCAGCACCGACGAGCTGTTGCAGCCCGCGCAGGCGCCCGACCCGCGGGTG
CGGGGGTCGGCGCACACCCACCACGGCGTCACCTACTGGCCGCTGACCCGCCAGGGCCCCGCCGGCGGCCTGCACGCCTT
CAAGATCCGGGTCAGCGCCCGGCGGCGCACCCCGCCCGCCGAGCTGCCCGTGCACGAGGGACAGGACTGGATGTACGTGC
TGGCCGGCCGGATGCGGCTGATCCTGGGCGACCGGGACTTCACCATCGATCCCGGCGAGGCGGTCGAGTTCTCGACGTGG
ACTCCGCACTGGTTCGGCGTGGTCGACGGGCCGGTGGAGGCCATCGTCATCTTCGGACCGCACGGCGAGCGGCTGCACCT
GCACAGTTAG

Upstream 100 bases:

>100_bases
ATAGCGTTCTTCCCAAAACCGCCCGGCCTCACCGGGTTCGCACGAAGTGTCCATACCGCGAGCTTGCCCAGCCGCCCAAG
TTTTGCCAAGCTTGTTTGCC

Downstream 100 bases:

>100_bases
CCGGCCACGCCATTGCCTGGCGCCGACGATGGTGCCAGGCTGACCCAATGACCGAAGCCGGAGGTTTCGTCGACCAGACC
GTCACCGGAGTCGCGGAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator XRE Family; Regulatory Protein; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain Protein; Cro/CI Family Transcriptional Regulator

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MQANTDIDVQVRRRLRELRVQRGLTLQEVGARAGIDVSTLSRLESGKRRLALDHLPRLARALSVSTDELLQPAQAPDPRV
RGSAHTHHGVTYWPLTRQGPAGGLHAFKIRVSARRRTPPAELPVHEGQDWMYVLAGRMRLILGDRDFTIDPGEAVEFSTW
TPHWFGVVDGPVEAIVIFGPHGERLHLHS

Sequences:

>Translated_189_residues
MQANTDIDVQVRRRLRELRVQRGLTLQEVGARAGIDVSTLSRLESGKRRLALDHLPRLARALSVSTDELLQPAQAPDPRV
RGSAHTHHGVTYWPLTRQGPAGGLHAFKIRVSARRRTPPAELPVHEGQDWMYVLAGRMRLILGDRDFTIDPGEAVEFSTW
TPHWFGVVDGPVEAIVIFGPHGERLHLHS
>Mature_189_residues
MQANTDIDVQVRRRLRELRVQRGLTLQEVGARAGIDVSTLSRLESGKRRLALDHLPRLARALSVSTDELLQPAQAPDPRV
RGSAHTHHGVTYWPLTRQGPAGGLHAFKIRVSARRRTPPAELPVHEGQDWMYVLAGRMRLILGDRDFTIDPGEAVEFSTW
TPHWFGVVDGPVEAIVIFGPHGERLHLHS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21155; Mature: 21155

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQANTDIDVQVRRRLRELRVQRGLTLQEVGARAGIDVSTLSRLESGKRRLALDHLPRLAR
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
ALSVSTDELLQPAQAPDPRVRGSAHTHHGVTYWPLTRQGPAGGLHAFKIRVSARRRTPPA
HHCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCCCCC
ELPVHEGQDWMYVLAGRMRLILGDRDFTIDPGEAVEFSTWTPHWFGVVDGPVEAIVIFGP
CCCCCCCCCEEEEEECCEEEEECCCCCEECCCCCEEECCCCCCEEEEECCCEEEEEEECC
HGERLHLHS
CCCEEEECC
>Mature Secondary Structure
MQANTDIDVQVRRRLRELRVQRGLTLQEVGARAGIDVSTLSRLESGKRRLALDHLPRLAR
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
ALSVSTDELLQPAQAPDPRVRGSAHTHHGVTYWPLTRQGPAGGLHAFKIRVSARRRTPPA
HHCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCCCCC
ELPVHEGQDWMYVLAGRMRLILGDRDFTIDPGEAVEFSTWTPHWFGVVDGPVEAIVIFGP
CCCCCCCCCEEEEEECCEEEEECCCCCEECCCCCEEECCCCCCEEEEECCCEEEEEEECC
HGERLHLHS
CCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA