| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408074
Identifier: 41408074
GI number: 41408074
Start: 2182995
End: 2183705
Strand: Direct
Name: 41408074
Synonym: MAP1976
Alternate gene names: NA
Gene position: 2182995-2183705 (Clockwise)
Preceding gene: 41408073
Following gene: 41408076
Centisome position: 45.2
GC content: 68.78
Gene sequence:
>711_bases ATGGACCGATGGCACAGGCGCGTCGACTCCGGCGATTGGGACGCCATCGCCGCCGCGATCGGCGAATTCGGCGGGGCGCT GCTGCCGCGGCTGGTCACGCCCCGGGAAGCCGCGCGGCTGCGCGAACTGTACGCCGACGACGGCCTGTTCCGGTCGACCA TCGACATGGCCCCCAAACGCTACGGCGCCGGGCCGTACCGCTACTTCCGCGCGCCCTATCCCGAGCCGATCGAACAACTC AAACAAGCCCTCTATCCCCGGTTGCTGCCGATCGCCCGCGACTGGTGGGGCAAACTCGGCCGCGACCCCGTGTGGCCGGA CCGCCTCGACGACTGGCTGGCGGCCTGCCACGCCGCCGGCCAGCAACGGTCCACCGCCCTGATGCTCAAATACGGTGCCG GCGACTGGAATGCGCTGCATCAGGATCTCTACGGGGACTTGGTGTTTCCGCTTCAGGTGGTGATCAACCTGAGCGATCCG CAGACCGACTATACCGGCGGCGAATTCCTGCTTGTCGAGCAGCGGCCGCGCGCCCAATCCCGCGGCACCGCAACGCAATT ACCTCAGGGCCATGGCTATGTCTTCACCACCCGGGAACGTCCGGTGCGCTCGGCCCGCGGCTGGTCCGCGGCGCCGGTAC GCCACGGGGTCTCGGTGGTGCGTTCCGGCCAGCGCTACGCGATGGGCTTGATCTTTCACGACGCCGCGTAG
Upstream 100 bases:
>100_bases CGCCCGGCCAACTCGTCCGCGACGATCCACGGTACCCGCTGCACCCGGCCGGTGCCAGCAACGCCCTCGCCGCGGCCGGG CGGGCCCTATCGTGGACCTG
Downstream 100 bases:
>100_bases GCCTGTTCGGTCCGCCGCAACATCATGATGTTGTCCATCAACGTCCCGACTTCTCCGTTCGGACCGGTCATTTCGCGCCC CGCGGCCTCGGCCCGCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MDRWHRRVDSGDWDAIAAAIGEFGGALLPRLVTPREAARLRELYADDGLFRSTIDMAPKRYGAGPYRYFRAPYPEPIEQL KQALYPRLLPIARDWWGKLGRDPVWPDRLDDWLAACHAAGQQRSTALMLKYGAGDWNALHQDLYGDLVFPLQVVINLSDP QTDYTGGEFLLVEQRPRAQSRGTATQLPQGHGYVFTTRERPVRSARGWSAAPVRHGVSVVRSGQRYAMGLIFHDAA
Sequences:
>Translated_236_residues MDRWHRRVDSGDWDAIAAAIGEFGGALLPRLVTPREAARLRELYADDGLFRSTIDMAPKRYGAGPYRYFRAPYPEPIEQL KQALYPRLLPIARDWWGKLGRDPVWPDRLDDWLAACHAAGQQRSTALMLKYGAGDWNALHQDLYGDLVFPLQVVINLSDP QTDYTGGEFLLVEQRPRAQSRGTATQLPQGHGYVFTTRERPVRSARGWSAAPVRHGVSVVRSGQRYAMGLIFHDAA >Mature_236_residues MDRWHRRVDSGDWDAIAAAIGEFGGALLPRLVTPREAARLRELYADDGLFRSTIDMAPKRYGAGPYRYFRAPYPEPIEQL KQALYPRLLPIARDWWGKLGRDPVWPDRLDDWLAACHAAGQQRSTALMLKYGAGDWNALHQDLYGDLVFPLQVVINLSDP QTDYTGGEFLLVEQRPRAQSRGTATQLPQGHGYVFTTRERPVRSARGWSAAPVRHGVSVVRSGQRYAMGLIFHDAA
Specific function: Unknown
COG id: COG3826
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018655 [H]
Pfam domain/function: PF09859 DUF2086 [H]
EC number: NA
Molecular weight: Translated: 26614; Mature: 26614
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRWHRRVDSGDWDAIAAAIGEFGGALLPRLVTPREAARLRELYADDGLFRSTIDMAPKR CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCHHH YGAGPYRYFRAPYPEPIEQLKQALYPRLLPIARDWWGKLGRDPVWPDRLDDWLAACHAAG CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC QQRSTALMLKYGAGDWNALHQDLYGDLVFPLQVVINLSDPQTDYTGGEFLLVEQRPRAQS CCCCEEEEEEECCCCHHHHHHHHHCCHHEEHHHEEECCCCCCCCCCCCEEEEECCCCCCC RGTATQLPQGHGYVFTTRERPVRSARGWSAAPVRHGVSVVRSGQRYAMGLIFHDAA CCCHHCCCCCCCEEEECCCCCHHHCCCCCCCHHHHHHHHHHCCCHHEEEEEEECCC >Mature Secondary Structure MDRWHRRVDSGDWDAIAAAIGEFGGALLPRLVTPREAARLRELYADDGLFRSTIDMAPKR CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCHHH YGAGPYRYFRAPYPEPIEQLKQALYPRLLPIARDWWGKLGRDPVWPDRLDDWLAACHAAG CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC QQRSTALMLKYGAGDWNALHQDLYGDLVFPLQVVINLSDPQTDYTGGEFLLVEQRPRAQS CCCCEEEEEEECCCCHHHHHHHHHCCHHEEHHHEEECCCCCCCCCCCCEEEEECCCCCCC RGTATQLPQGHGYVFTTRERPVRSARGWSAAPVRHGVSVVRSGQRYAMGLIFHDAA CCCHHCCCCCCCEEEECCCCCHHHCCCCCCCHHHHHHHHHHCCCHHEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]