| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408070
Identifier: 41408070
GI number: 41408070
Start: 2179897
End: 2180268
Strand: Reverse
Name: 41408070
Synonym: MAP1972c
Alternate gene names: NA
Gene position: 2180268-2179897 (Counterclockwise)
Preceding gene: 41408075
Following gene: 41408067
Centisome position: 45.14
GC content: 70.7
Gene sequence:
>372_bases ATGGGCGAAAGAATCGCGGCCGGCGCGGCCGGGGTGGCAATGACCGTCGCCGGCCTTGTCGCGACGCTTGTGCTGACGGC GGGACCGGCGGCGGCCGACTGGCCGATGGACGATCCGGAACCGGCGCCGGCGTCGCTGCCGAACTGCACGGCGGCCGACC TGGCCCAGGTGTCGGCGGGCGTCGCCGCAGCCACGTCGGCGTATCTGTTCAGTCACCCGGACGTCAACGCCTACTTCACC AGCTTGAAGGGCCAGCCCCGCGACGAGATGCGCGCGCAGCTCAAGCAGTACATGGACGCCAACCCGCAGACCCACTCCGA CCTGGAGGGCATCCGCCAGCCGCTCACCGATTTCCAGGACCGCTGCCGGTGA
Upstream 100 bases:
>100_bases GAGGAAACCCTTATGGTTTGCCATACGCACACCCGCCTTTCGGCAGAACCGACGAATGGAGCGTTCCATGGCGCCTTTTG CTCGCTCGGCACCCCGAGTC
Downstream 100 bases:
>100_bases CGGCCCCGGCCGGTCAGCCGGCCGGCGGCGGCTGCAGATGCATCGCCAGATCGCTCAGCTCGAGGATGGTCTGAATCTCG CTGTCCCGGAACGGCCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MGERIAAGAAGVAMTVAGLVATLVLTAGPAAADWPMDDPEPAPASLPNCTAADLAQVSAGVAAATSAYLFSHPDVNAYFT SLKGQPRDEMRAQLKQYMDANPQTHSDLEGIRQPLTDFQDRCR
Sequences:
>Translated_123_residues MGERIAAGAAGVAMTVAGLVATLVLTAGPAAADWPMDDPEPAPASLPNCTAADLAQVSAGVAAATSAYLFSHPDVNAYFT SLKGQPRDEMRAQLKQYMDANPQTHSDLEGIRQPLTDFQDRCR >Mature_122_residues GERIAAGAAGVAMTVAGLVATLVLTAGPAAADWPMDDPEPAPASLPNCTAADLAQVSAGVAAATSAYLFSHPDVNAYFTS LKGQPRDEMRAQLKQYMDANPQTHSDLEGIRQPLTDFQDRCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12889; Mature: 12757
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGERIAAGAAGVAMTVAGLVATLVLTAGPAAADWPMDDPEPAPASLPNCTAADLAQVSAG CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH VAAATSAYLFSHPDVNAYFTSLKGQPRDEMRAQLKQYMDANPQTHSDLEGIRQPLTDFQD HHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH RCR HCC >Mature Secondary Structure GERIAAGAAGVAMTVAGLVATLVLTAGPAAADWPMDDPEPAPASLPNCTAADLAQVSAG CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH VAAATSAYLFSHPDVNAYFTSLKGQPRDEMRAQLKQYMDANPQTHSDLEGIRQPLTDFQD HHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH RCR HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA