| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41408069
Identifier: 41408069
GI number: 41408069
Start: 2178708
End: 2179883
Strand: Direct
Name: 41408069
Synonym: MAP1971
Alternate gene names: NA
Gene position: 2178708-2179883 (Clockwise)
Preceding gene: 41408068
Following gene: 41408071
Centisome position: 45.11
GC content: 68.62
Gene sequence:
>1176_bases GTGCACCGTCGACTGGTGTTCAAGTTGCCGCTGCTATTGGCAGGAGGCATGGCTTTGGCCCGAGCACCGCACGCGTCCGC GCAGCCGCCCCGCACGTCGCCGCAGGCAAGCCGGTGGTCACCCGAACGGGCCAACCGCTGGTATCAGGCGCAGGATTGGC CGGTCGGCGCGAACTACATCACCTCCAACGCCATCAACCAGCTGGAGATGTTCCAGCCGGACACCTTCGACCCCCGCCGC ATCGACACCGAACTGGGCTGGGCCCGCCGCAACGGGTTCAACGCGGTGCGCGTCTTCCTGCACGACCTGCTGTGGGAACA GGACCACCGGGGGTTTCAGGGCCGCCTGGCCCGGTTCGTCGACATCGCGGCCCGACACGGCATCAAGCCGCTGTTCGTGT TGTTCGATTCGTGCTGGGATCCCTTTCCCCAACCGGGTCCGCAGCGGGCGCCCCGGCCCGGCATCCACAATTCCGGCTGG GTGCAAAGCCCGGGCGCGGCGCGGCTGGACGACCACGGCTACCTGCACACCCTGCGCGGCTACGTCACCGGGGTGCTGGC GCAATTCCGCACCGACGACCGCATCCTGGGCTGGGACCTGTGGAACGAGCCGGACAATCCCGCCGACGCCTACGCCTCGG TCGAGCGCACCGACAAGCTGGACCGGGTCGCCGAGCTGCTGCCGCAGGTGTTCGCGTGGGCCCGCTCGGTGGATCCCTGC CAACCGTTGACCAGCGGCGTGTGGCAGGGCGAGTGGGCCGACCCGGCACGGCGCAGCGTCATCAGCGGCATCCAGCTCGA CAACTCCGACGTCATCACCTTCCACTGCTACGGCGAACCGGCGGCGTTCGAGAAGCGCATCGCCGATCTGGTGCCGCTGG GGCGCCCGATCCTGTGCACCGAGTACATGGCCCGGCCGCTGGGCAGCACGGTGCAAACCATCCTGCCGATCGCCAAGCGC GCCAACGTCGGCGCGTTCAACTGGGGCCTGGTCGCCGGTAAAACCCAGACGTTTTTCCCGTGGGATTCCTGGGAGCATCC GGATCCGGCGATGCCCCGCGAATGGTTCCACGACCTGCTGGATCCCGACGGGCGGCCGTTCCGGGACAGCGAGATTCAGA CCATCCTCGAGCTGAGCGATCTGGCGATGCATCTGCAGCCGCCGCCGGCCGGCTGA
Upstream 100 bases:
>100_bases GGGCTGAAAATCATTGTGTGGCAACGATGTACGATTGCCGAAGACGGATTGTCTAGCGCAAGGGTGGGACCACATCGACC GGGGGAATCGTGGTGACTTA
Downstream 100 bases:
>100_bases CCGGCCGGGGCCGTCACCGGCAGCGGTCCTGGAAATCGGTGAGCGGCTGGCGGATGCCCTCCAGGTCGGAGTGGGTCTGC GGGTTGGCGTCCATGTACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MHRRLVFKLPLLLAGGMALARAPHASAQPPRTSPQASRWSPERANRWYQAQDWPVGANYITSNAINQLEMFQPDTFDPRR IDTELGWARRNGFNAVRVFLHDLLWEQDHRGFQGRLARFVDIAARHGIKPLFVLFDSCWDPFPQPGPQRAPRPGIHNSGW VQSPGAARLDDHGYLHTLRGYVTGVLAQFRTDDRILGWDLWNEPDNPADAYASVERTDKLDRVAELLPQVFAWARSVDPC QPLTSGVWQGEWADPARRSVISGIQLDNSDVITFHCYGEPAAFEKRIADLVPLGRPILCTEYMARPLGSTVQTILPIAKR ANVGAFNWGLVAGKTQTFFPWDSWEHPDPAMPREWFHDLLDPDGRPFRDSEIQTILELSDLAMHLQPPPAG
Sequences:
>Translated_391_residues MHRRLVFKLPLLLAGGMALARAPHASAQPPRTSPQASRWSPERANRWYQAQDWPVGANYITSNAINQLEMFQPDTFDPRR IDTELGWARRNGFNAVRVFLHDLLWEQDHRGFQGRLARFVDIAARHGIKPLFVLFDSCWDPFPQPGPQRAPRPGIHNSGW VQSPGAARLDDHGYLHTLRGYVTGVLAQFRTDDRILGWDLWNEPDNPADAYASVERTDKLDRVAELLPQVFAWARSVDPC QPLTSGVWQGEWADPARRSVISGIQLDNSDVITFHCYGEPAAFEKRIADLVPLGRPILCTEYMARPLGSTVQTILPIAKR ANVGAFNWGLVAGKTQTFFPWDSWEHPDPAMPREWFHDLLDPDGRPFRDSEIQTILELSDLAMHLQPPPAG >Mature_391_residues MHRRLVFKLPLLLAGGMALARAPHASAQPPRTSPQASRWSPERANRWYQAQDWPVGANYITSNAINQLEMFQPDTFDPRR IDTELGWARRNGFNAVRVFLHDLLWEQDHRGFQGRLARFVDIAARHGIKPLFVLFDSCWDPFPQPGPQRAPRPGIHNSGW VQSPGAARLDDHGYLHTLRGYVTGVLAQFRTDDRILGWDLWNEPDNPADAYASVERTDKLDRVAELLPQVFAWARSVDPC QPLTSGVWQGEWADPARRSVISGIQLDNSDVITFHCYGEPAAFEKRIADLVPLGRPILCTEYMARPLGSTVQTILPIAKR ANVGAFNWGLVAGKTQTFFPWDSWEHPDPAMPREWFHDLLDPDGRPFRDSEIQTILELSDLAMHLQPPPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44253; Mature: 44253
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRRLVFKLPLLLAGGMALARAPHASAQPPRTSPQASRWSPERANRWYQAQDWPVGANYI CCCCEEEHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHH TSNAINQLEMFQPDTFDPRRIDTELGWARRNGFNAVRVFLHDLLWEQDHRGFQGRLARFV HHHHHHHHHHCCCCCCCCHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH DIAARHGIKPLFVLFDSCWDPFPQPGPQRAPRPGIHNSGWVQSPGAARLDDHGYLHTLRG HHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH YVTGVLAQFRTDDRILGWDLWNEPDNPADAYASVERTDKLDRVAELLPQVFAWARSVDPC HHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QPLTSGVWQGEWADPARRSVISGIQLDNSDVITFHCYGEPAAFEKRIADLVPLGRPILCT CHHHHCCCCCCCCCHHHHHHHHCCEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHH EYMARPLGSTVQTILPIAKRANVGAFNWGLVAGKTQTFFPWDSWEHPDPAMPREWFHDLL HHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEECCCCEECCCCCCCCCCCCCCHHHHHHHH DPDGRPFRDSEIQTILELSDLAMHLQPPPAG CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MHRRLVFKLPLLLAGGMALARAPHASAQPPRTSPQASRWSPERANRWYQAQDWPVGANYI CCCCEEEHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHH TSNAINQLEMFQPDTFDPRRIDTELGWARRNGFNAVRVFLHDLLWEQDHRGFQGRLARFV HHHHHHHHHHCCCCCCCCHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH DIAARHGIKPLFVLFDSCWDPFPQPGPQRAPRPGIHNSGWVQSPGAARLDDHGYLHTLRG HHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH YVTGVLAQFRTDDRILGWDLWNEPDNPADAYASVERTDKLDRVAELLPQVFAWARSVDPC HHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QPLTSGVWQGEWADPARRSVISGIQLDNSDVITFHCYGEPAAFEKRIADLVPLGRPILCT CHHHHCCCCCCCCCHHHHHHHHCCEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHH EYMARPLGSTVQTILPIAKRANVGAFNWGLVAGKTQTFFPWDSWEHPDPAMPREWFHDLL HHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEECCCCEECCCCCCCCCCCCCCHHHHHHHH DPDGRPFRDSEIQTILELSDLAMHLQPPPAG CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA