| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407873
Identifier: 41407873
GI number: 41407873
Start: 1937174
End: 1938241
Strand: Direct
Name: 41407873
Synonym: MAP1775
Alternate gene names: NA
Gene position: 1937174-1938241 (Clockwise)
Preceding gene: 41407870
Following gene: 41407879
Centisome position: 40.11
GC content: 71.91
Gene sequence:
>1068_bases ATGGTGATCAGGAGAATCGCGCGACCCCTGTTATCAGTGGCATTCATCGGACAAGGAGTCAACTCACTGCTCAACCCGAA ATCGGCGGCCGAGGCGGCGGCGCCGGCCGTGGACGGGCTGCAGGCGTTACCGGATCCGGTGAGCGGCAACATTCCCAGCG ATCCTGAGACGGTCGCACAGATCACGGCGGCGGTCCAGATCGGCGGCGGTCTGCTGCTGGCCACCGGCAAGCTGCCCCGG GTCGCCTCGGCCGCGCTCGCGCTGACGGTGTTGCCGGCCAACCTCGGGGCGCACTCGTTCTGGAACGAAAGCGACCCGGT GGCCAAAGCCCAGAAGCGCCAACAGTTTCTCACCGACCTGAGCCTGCTGGGCGGATTGTTGATCGCCTCCGCGGACACCG CGGGCAAGCCCTCGCTGGGCTGGCGCGGACGGCGGGCCGCCGAGCGGCTCTCGGAACGGGTGTCTTCGGCGTGGCCCGGC TCCGACGACTCGGGGTTCGAGGCCGACCTGTCGGAGCTGGGCGAGCGGATTGCGCACGGCCTGCAGATCGGCGCCGAGCG GGGTCGCGAATTGGCCAGCACCGCAGCCGAACGCGGCGCGCCGTACGCCGAGGCGGCACTCGAACGCGGCCGCGAATTGG CCAGCACGGCCGCCGAACGCGGCGCGCCGTACGCCGAAGCGGCACTCGAACGGGGCCGCGAATTGGCCAGCACGGCCGCC GAGCGCGGGAGGCCGCTGGCCAAGAAGGCACGCAAGCGCGGCGAGGAATTGGCCGACGAGGCCGCCGAGCGGGCGGCCTA TCTGGCCCAGAAGGCACGCAAGCGCAGCGAGGAACTCGCCGAGGAGGCCGCCGAGCGCGGCAAGTCGCTGGCCAAGAAGG CGCGCAAGCGCAGCGAGAAGCTGGCCAAGAAGGCACGCAAGCGCAGCGAGAAGCTCGCCGGCACGGCGCGGGTGCGCGGC GAGGAGCTGGCCGAAACCGCCCGGCAGCGCGGCAGCCTGCTGGCCGACACCGCCCGCGAGCGGGTCGGCGGCCAGGTCGG GACCGGACGCCGCAAGCTGTCCTGGTGA
Upstream 100 bases:
>100_bases TAGCCGCACCCGCCGGGCCGCCGCAGCGCCGCGGCGCGGCACTAGCTGGGCATATCGGCACCACGGTTTGCTCGACAACG AGCCGGGTAATACACGGGCC
Downstream 100 bases:
>100_bases GCGGTTAGACCGGCCAACGCGACCGCAAGGTCTCGGGTGCCCACGCCGGCCAGTCGACGGCACCGACCGTCAGCCCGCCG CTGAGCCGGGCCACCACACG
Product: hypothetical protein
Products: NA
Alternate protein names: DoxX Protein; DoxX Subfamily Protein
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MVIRRIARPLLSVAFIGQGVNSLLNPKSAAEAAAPAVDGLQALPDPVSGNIPSDPETVAQITAAVQIGGGLLLATGKLPR VASAALALTVLPANLGAHSFWNESDPVAKAQKRQQFLTDLSLLGGLLIASADTAGKPSLGWRGRRAAERLSERVSSAWPG SDDSGFEADLSELGERIAHGLQIGAERGRELASTAAERGAPYAEAALERGRELASTAAERGAPYAEAALERGRELASTAA ERGRPLAKKARKRGEELADEAAERAAYLAQKARKRSEELAEEAAERGKSLAKKARKRSEKLAKKARKRSEKLAGTARVRG EELAETARQRGSLLADTARERVGGQVGTGRRKLSW
Sequences:
>Translated_355_residues MVIRRIARPLLSVAFIGQGVNSLLNPKSAAEAAAPAVDGLQALPDPVSGNIPSDPETVAQITAAVQIGGGLLLATGKLPR VASAALALTVLPANLGAHSFWNESDPVAKAQKRQQFLTDLSLLGGLLIASADTAGKPSLGWRGRRAAERLSERVSSAWPG SDDSGFEADLSELGERIAHGLQIGAERGRELASTAAERGAPYAEAALERGRELASTAAERGAPYAEAALERGRELASTAA ERGRPLAKKARKRGEELADEAAERAAYLAQKARKRSEELAEEAAERGKSLAKKARKRSEKLAKKARKRSEKLAGTARVRG EELAETARQRGSLLADTARERVGGQVGTGRRKLSW >Mature_355_residues MVIRRIARPLLSVAFIGQGVNSLLNPKSAAEAAAPAVDGLQALPDPVSGNIPSDPETVAQITAAVQIGGGLLLATGKLPR VASAALALTVLPANLGAHSFWNESDPVAKAQKRQQFLTDLSLLGGLLIASADTAGKPSLGWRGRRAAERLSERVSSAWPG SDDSGFEADLSELGERIAHGLQIGAERGRELASTAAERGAPYAEAALERGRELASTAAERGAPYAEAALERGRELASTAA ERGRPLAKKARKRGEELADEAAERAAYLAQKARKRSEELAEEAAERGKSLAKKARKRSEKLAKKARKRSEKLAGTARVRG EELAETARQRGSLLADTARERVGGQVGTGRRKLSW
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37463; Mature: 37463
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIRRIARPLLSVAFIGQGVNSLLNPKSAAEAAAPAVDGLQALPDPVSGNIPSDPETVAQ CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH ITAAVQIGGGLLLATGKLPRVASAALALTVLPANLGAHSFWNESDPVAKAQKRQQFLTDL HHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHH SLLGGLLIASADTAGKPSLGWRGRRAAERLSERVSSAWPGSDDSGFEADLSELGERIAHG HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH LQIGAERGRELASTAAERGAPYAEAALERGRELASTAAERGAPYAEAALERGRELASTAA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ERGRPLAKKARKRGEELADEAAERAAYLAQKARKRSEELAEEAAERGKSLAKKARKRSEK HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAKKARKRSEKLAGTARVRGEELAETARQRGSLLADTARERVGGQVGTGRRKLSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MVIRRIARPLLSVAFIGQGVNSLLNPKSAAEAAAPAVDGLQALPDPVSGNIPSDPETVAQ CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH ITAAVQIGGGLLLATGKLPRVASAALALTVLPANLGAHSFWNESDPVAKAQKRQQFLTDL HHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHH SLLGGLLIASADTAGKPSLGWRGRRAAERLSERVSSAWPGSDDSGFEADLSELGERIAHG HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH LQIGAERGRELASTAAERGAPYAEAALERGRELASTAAERGAPYAEAALERGRELASTAA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ERGRPLAKKARKRGEELADEAAERAAYLAQKARKRSEELAEEAAERGKSLAKKARKRSEK HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAKKARKRSEKLAGTARVRGEELAETARQRGSLLADTARERVGGQVGTGRRKLSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA