| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is galE [H]
Identifier: 41407849
GI number: 41407849
Start: 1913828
End: 1914997
Strand: Direct
Name: galE [H]
Synonym: MAP1751
Alternate gene names: 41407849
Gene position: 1913828-1914997 (Clockwise)
Preceding gene: 41407848
Following gene: 41407851
Centisome position: 39.63
GC content: 70.09
Gene sequence:
>1170_bases ATGACCGCCAACACCGTTCTGGTCACCGGCGCGTTCGGACAGGTCGGCAAGCGCTGCACGCAGCTTCTGCTGCAGCGCGG ACGCACCGTCGTCGCGATGGACCTGCGCAATGACAACACCGCCGCCGTCGCAACCGAACTCGCCGCCGGCGGCTATCCCG GCACGCTGATTCCCGCCTACACCGACCTGCTGGACGCCGAGGCGGTGCGGGACCTGGTCACCGCCCACCAGCCCGACGCC GTCGTGCACCTGGCCGCCGTGGTCTCCCCGCTGTCATATCGCAAGCCCGACCTGGCCCGGCGAGTCAACGTCGGCGGCAC GGAGAACCTGTTGGCCGCCTGCACGGCGCTGCCCCGCCCGCCCCTGTTCCTAATGGCCTCCAGCGCCGCGGTCTACGGGT CGCGAAACCCCTACCGCCAGCCGGAGCGGATCACCCCGGATACCCCGGTGAACCCGATCGACCAATACGGCCAGGACAAG GTGCTGGCCGAGGCGGCAATCCGGGCCAGCGGGCTGCCGTATGCGCTGTTCCGGCTCGGCGGGATCATCTCGCCGGACAC CCACGCCTCCATCAACGGCGACTACCTGCTGCTGATGCGATCGATGCCCAGCGACAACCGGATGCACGCGGTGGATGCGC GGGACGTGGCGCTGGCCTTCGCCAACGGCGTCGATCGTGCGGCCACCATTTCCGGCAAGGTGCTGCTCATCGGCGGCAAC GAGTCCTACGTGCTCACCCAGCGCGAACTGGAGGACGCCATGATGGAGGCCGTCGGGCTGGGCCGGCTCGGCCCGTCGGC CAGTTTGCCCGGCAACCCGGCCGACGACCGGGGCTGGAGTTTCACCGGCTGGTACGACACCACCGAAGCCCAGCAGCTGC TCGACTTCCAGGAGCACGACTGGAGCCAGACGGTGGCCTGGCTGGCCGAATCGCAGGGCCGCAGCCGGCTCGCCCTGCGA CTGCTGGGGCCGCTGCTGCGGCCCCTCCTGCGCACCATCTTGATCGTGCAGCGCCGGCTGGGAGGGACGCGGCCCCTACG CCGACCCGTGGACGTTGATCGAAAAGAAGTACGGCACAGCGGCATTGGCGACCGCCGACTAACCGGTTCGGTCAGCGGTC GATCCACGCCAGCTGCGCGTCGGCGTGGTGTCCGCCCACCGGCGGCGTGA
Upstream 100 bases:
>100_bases GAGGACATCGTGACTCCCCTCTTCTCGATCTACGTCTCCCCCCGGATCCGCGCCGCGATCGGCACCTTCGCCGGCCGCCT GATGGATCGGTGACCCGGCC
Downstream 100 bases:
>100_bases GTCGATCCAGCCGGGACAGCTGCTCGGTAGTCAACTCCAGCGCGTCGGCCCCGACGTTTTCTTCTAGGCGGGCGACGCGT TTGGTGCCCGGGATCGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MTANTVLVTGAFGQVGKRCTQLLLQRGRTVVAMDLRNDNTAAVATELAAGGYPGTLIPAYTDLLDAEAVRDLVTAHQPDA VVHLAAVVSPLSYRKPDLARRVNVGGTENLLAACTALPRPPLFLMASSAAVYGSRNPYRQPERITPDTPVNPIDQYGQDK VLAEAAIRASGLPYALFRLGGIISPDTHASINGDYLLLMRSMPSDNRMHAVDARDVALAFANGVDRAATISGKVLLIGGN ESYVLTQRELEDAMMEAVGLGRLGPSASLPGNPADDRGWSFTGWYDTTEAQQLLDFQEHDWSQTVAWLAESQGRSRLALR LLGPLLRPLLRTILIVQRRLGGTRPLRRPVDVDRKEVRHSGIGDRRLTGSVSGRSTPAARRRGVRPPAA
Sequences:
>Translated_389_residues MTANTVLVTGAFGQVGKRCTQLLLQRGRTVVAMDLRNDNTAAVATELAAGGYPGTLIPAYTDLLDAEAVRDLVTAHQPDA VVHLAAVVSPLSYRKPDLARRVNVGGTENLLAACTALPRPPLFLMASSAAVYGSRNPYRQPERITPDTPVNPIDQYGQDK VLAEAAIRASGLPYALFRLGGIISPDTHASINGDYLLLMRSMPSDNRMHAVDARDVALAFANGVDRAATISGKVLLIGGN ESYVLTQRELEDAMMEAVGLGRLGPSASLPGNPADDRGWSFTGWYDTTEAQQLLDFQEHDWSQTVAWLAESQGRSRLALR LLGPLLRPLLRTILIVQRRLGGTRPLRRPVDVDRKEVRHSGIGDRRLTGSVSGRSTPAARRRGVRPPAA >Mature_388_residues TANTVLVTGAFGQVGKRCTQLLLQRGRTVVAMDLRNDNTAAVATELAAGGYPGTLIPAYTDLLDAEAVRDLVTAHQPDAV VHLAAVVSPLSYRKPDLARRVNVGGTENLLAACTALPRPPLFLMASSAAVYGSRNPYRQPERITPDTPVNPIDQYGQDKV LAEAAIRASGLPYALFRLGGIISPDTHASINGDYLLLMRSMPSDNRMHAVDARDVALAFANGVDRAATISGKVLLIGGNE SYVLTQRELEDAMMEAVGLGRLGPSASLPGNPADDRGWSFTGWYDTTEAQQLLDFQEHDWSQTVAWLAESQGRSRLALRL LGPLLRPLLRTILIVQRRLGGTRPLRRPVDVDRKEVRHSGIGDRRLTGSVSGRSTPAARRRGVRPPAA
Specific function: Can have functions other than metabolism of galactose. It also could be involved in preparation of carbohydrate residues for incorporation into complex polymers, such as exopolysaccharides [H]
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sugar epimerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001509 - InterPro: IPR005886 - InterPro: IPR016040 [H]
Pfam domain/function: PF01370 Epimerase [H]
EC number: =5.1.3.2 [H]
Molecular weight: Translated: 41976; Mature: 41845
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANTVLVTGAFGQVGKRCTQLLLQRGRTVVAMDLRNDNTAAVATELAAGGYPGTLIPAY CCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCCCHHHHH TDLLDAEAVRDLVTAHQPDAVVHLAAVVSPLSYRKPDLARRVNVGGTENLLAACTALPRP HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCCC PLFLMASSAAVYGSRNPYRQPERITPDTPVNPIDQYGQDKVLAEAAIRASGLPYALFRLG CEEEEECCCCEECCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCHHHHHHC GIISPDTHASINGDYLLLMRSMPSDNRMHAVDARDVALAFANGVDRAATISGKVLLIGGN CCCCCCCCCCCCCCEEEEEECCCCCCCEEEECHHHHHHHHHCCCCCCEEECCEEEEEECC ESYVLTQRELEDAMMEAVGLGRLGPSASLPGNPADDRGWSFTGWYDTTEAQQLLDFQEHD CCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCC WSQTVAWLAESQGRSRLALRLLGPLLRPLLRTILIVQRRLGGTRPLRRPVDVDRKEVRHS HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHC GIGDRRLTGSVSGRSTPAARRRGVRPPAA CCCCCEEECCCCCCCCCHHHHCCCCCCCC >Mature Secondary Structure TANTVLVTGAFGQVGKRCTQLLLQRGRTVVAMDLRNDNTAAVATELAAGGYPGTLIPAY CCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCCCHHHHH TDLLDAEAVRDLVTAHQPDAVVHLAAVVSPLSYRKPDLARRVNVGGTENLLAACTALPRP HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCCC PLFLMASSAAVYGSRNPYRQPERITPDTPVNPIDQYGQDKVLAEAAIRASGLPYALFRLG CEEEEECCCCEECCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCHHHHHHC GIISPDTHASINGDYLLLMRSMPSDNRMHAVDARDVALAFANGVDRAATISGKVLLIGGN CCCCCCCCCCCCCCEEEEEECCCCCCCEEEECHHHHHHHHHCCCCCCEEECCEEEEEECC ESYVLTQRELEDAMMEAVGLGRLGPSASLPGNPADDRGWSFTGWYDTTEAQQLLDFQEHD CCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCC WSQTVAWLAESQGRSRLALRLLGPLLRPLLRTILIVQRRLGGTRPLRRPVDVDRKEVRHS HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHC GIGDRRLTGSVSGRSTPAARRRGVRPPAA CCCCCEEECCCCCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788721 [H]