| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407831
Identifier: 41407831
GI number: 41407831
Start: 1894235
End: 1894861
Strand: Direct
Name: 41407831
Synonym: MAP1733
Alternate gene names: NA
Gene position: 1894235-1894861 (Clockwise)
Preceding gene: 41407825
Following gene: 41407832
Centisome position: 39.22
GC content: 66.99
Gene sequence:
>627_bases ATGGGCCCCGGGCCGCGACAAGCTGCCCTCAACCATCGCTCCGCGGTGGTGTTCATCCATCCCGCCGAATTGCCAGGACC CACCGTGCCCGGCGTTGCCCCGTTCGCGGCCGACTTCCTGCTGGACACCACTCGATCTGCCTACCTGTTGGTGCGCAACG GCATTCGGAACCGGTATCCCAACATCCGGTTCCTGCTCAGCCACGCGGGCGGGTTCGTGCCCTATGCGAGTCACCGGATG GCGATGGCTATCATGGCCGACACCGGTCGCAGCTTCGCCGATGTCCTCGACGACTTCTCCAGCTTCTACTTCGACACCGC GCTATCCTCCAGCGCGGCGGCGCTACCCTCGCTGCTGGCCTTCGCCAGACCGGGGCACATCACCTTCGGATCGGACTGGC CGTTCGCCCCGGTCGCCGTCGGCAAACTGTTCGCCGCCGGATTGGAAACCTACCCAGCCCTCGACACCAGCACCCGTGGT GCTATCGAGCGCACCAACGCGTTGGCCCTATTCCCGCGGCTCGGCACCCCACCCCACCCCATCCCGCAGTCCCCCGCCCA GCGAATACGCCACTCCCTCAGCCGTGGCGCCATGCGCATCGTCGCTCGCATGACGAGCACCAGCTGA
Upstream 100 bases:
>100_bases CCGCCAACCTGCTCGGCCGGCTTGGCCTGAAAGTGCTTGTGCTCGAGCGTGACTGCGTCTGGCCCTCGACAATCCCCGGC GGGTGGGCAAGCTGGTGCTG
Downstream 100 bases:
>100_bases TCGACGTCGACCAAGCGGCGCCACAGCCCATTCGCTCCGTATATACAGGAACTTTCCAGCATTATTTCCGCATTTGCGGA TATCAGGCGACATACACTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; 2-Amino-3-Carboxymuconate 6-Semialdehyde Decarboxylase
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MGPGPRQAALNHRSAVVFIHPAELPGPTVPGVAPFAADFLLDTTRSAYLLVRNGIRNRYPNIRFLLSHAGGFVPYASHRM AMAIMADTGRSFADVLDDFSSFYFDTALSSSAAALPSLLAFARPGHITFGSDWPFAPVAVGKLFAAGLETYPALDTSTRG AIERTNALALFPRLGTPPHPIPQSPAQRIRHSLSRGAMRIVARMTSTS
Sequences:
>Translated_208_residues MGPGPRQAALNHRSAVVFIHPAELPGPTVPGVAPFAADFLLDTTRSAYLLVRNGIRNRYPNIRFLLSHAGGFVPYASHRM AMAIMADTGRSFADVLDDFSSFYFDTALSSSAAALPSLLAFARPGHITFGSDWPFAPVAVGKLFAAGLETYPALDTSTRG AIERTNALALFPRLGTPPHPIPQSPAQRIRHSLSRGAMRIVARMTSTS >Mature_207_residues GPGPRQAALNHRSAVVFIHPAELPGPTVPGVAPFAADFLLDTTRSAYLLVRNGIRNRYPNIRFLLSHAGGFVPYASHRMA MAIMADTGRSFADVLDDFSSFYFDTALSSSAAALPSLLAFARPGHITFGSDWPFAPVAVGKLFAAGLETYPALDTSTRGA IERTNALALFPRLGTPPHPIPQSPAQRIRHSLSRGAMRIVARMTSTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22302; Mature: 22171
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPGPRQAALNHRSAVVFIHPAELPGPTVPGVAPFAADFLLDTTRSAYLLVRNGIRNRYP CCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCC NIRFLLSHAGGFVPYASHRMAMAIMADTGRSFADVLDDFSSFYFDTALSSSAAALPSLLA CCEEHEECCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH FARPGHITFGSDWPFAPVAVGKLFAAGLETYPALDTSTRGAIERTNALALFPRLGTPPHP HCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCEEEEECCCCCCCCC IPQSPAQRIRHSLSRGAMRIVARMTSTS CCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GPGPRQAALNHRSAVVFIHPAELPGPTVPGVAPFAADFLLDTTRSAYLLVRNGIRNRYP CCCCHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCC NIRFLLSHAGGFVPYASHRMAMAIMADTGRSFADVLDDFSSFYFDTALSSSAAALPSLLA CCEEHEECCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH FARPGHITFGSDWPFAPVAVGKLFAAGLETYPALDTSTRGAIERTNALALFPRLGTPPHP HCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCEEEEECCCCCCCCC IPQSPAQRIRHSLSRGAMRIVARMTSTS CCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA