| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407815
Identifier: 41407815
GI number: 41407815
Start: 1876584
End: 1877228
Strand: Direct
Name: 41407815
Synonym: MAP1717
Alternate gene names: NA
Gene position: 1876584-1877228 (Clockwise)
Preceding gene: 41407814
Following gene: 41407818
Centisome position: 38.85
GC content: 67.6
Gene sequence:
>645_bases TTGACCCACTCCATCGGACGACGCGAGAGGAACCCCGTGAAAACGACCGCACACCGCCGTTCGGCAGTCGTCGGCCTGGC CGCCGTCGCGCTGATCACCGTGGGATGCAGCAATGGCAAGAGCGTCGACGCGTCGGCACCGCCCCACGCGGCAGCGAGCG CCACCTCCACGTCGGCGAACCCGGCGCAGCCCACCGAGGTGAACCTCATCGGGGAGAGCAACGTCGAGGTGACGCTGACC GGCCCGATCGCTGCCAAGTACGCGTCGGCCACCGACGATCAGAAGAAGGCTCTCGGCAAGCCACTGACGGGTGACCGCAA CGCGGGGAAACGGGAGAGCGGCGTGGTGTTCCAGCAGTTCGAGGGCGGCGTCATCACCGCCAAGAACGACGCGCCCGGAA CGCCCGCCTATATCACCCTGGGCAAGATCCGGGAGGCCTGGAATGTGCCACGCGGCGCGGACGGCACGCCCGAGATCACC GGCACCAACGGTTCGGCAGGTCCGCTGGGATCGCCCGTCAGCGACCAGAGCTCCGTCGGCGATGTGCTCGTGTCGAACTT CGAGCACGGCACGATCCAATACAACCCGAAGACCGACCAGGTCGCGGTGACGGTCAACGGCAAGGTTGTGCCGTCCGGGC TGTAG
Upstream 100 bases:
>100_bases CAGCGCTGAGGTTTACTCGGGTGCTCTGGCTTGCTGCCAGTGCTAGCGGCGTAAGTTCGTTCGGAGCGATAAGACCGCCG GCGAGGAGGTCGGCCGCACC
Downstream 100 bases:
>100_bases CCCGAATCAGGCGGTCACCCGACCGGCTAGCTCTTCCAGACCACCTTGTCCGTGCCTCCGGCGTCCCGGTAGACGACGCT GTCGGGGTTCGTGCCGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTHSIGRRERNPVKTTAHRRSAVVGLAAVALITVGCSNGKSVDASAPPHAAASATSTSANPAQPTEVNLIGESNVEVTLT GPIAAKYASATDDQKKALGKPLTGDRNAGKRESGVVFQQFEGGVITAKNDAPGTPAYITLGKIREAWNVPRGADGTPEIT GTNGSAGPLGSPVSDQSSVGDVLVSNFEHGTIQYNPKTDQVAVTVNGKVVPSGL
Sequences:
>Translated_214_residues MTHSIGRRERNPVKTTAHRRSAVVGLAAVALITVGCSNGKSVDASAPPHAAASATSTSANPAQPTEVNLIGESNVEVTLT GPIAAKYASATDDQKKALGKPLTGDRNAGKRESGVVFQQFEGGVITAKNDAPGTPAYITLGKIREAWNVPRGADGTPEIT GTNGSAGPLGSPVSDQSSVGDVLVSNFEHGTIQYNPKTDQVAVTVNGKVVPSGL >Mature_213_residues THSIGRRERNPVKTTAHRRSAVVGLAAVALITVGCSNGKSVDASAPPHAAASATSTSANPAQPTEVNLIGESNVEVTLTG PIAAKYASATDDQKKALGKPLTGDRNAGKRESGVVFQQFEGGVITAKNDAPGTPAYITLGKIREAWNVPRGADGTPEITG TNGSAGPLGSPVSDQSSVGDVLVSNFEHGTIQYNPKTDQVAVTVNGKVVPSGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21792; Mature: 21661
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHSIGRRERNPVKTTAHRRSAVVGLAAVALITVGCSNGKSVDASAPPHAAASATSTSAN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCC PAQPTEVNLIGESNVEVTLTGPIAAKYASATDDQKKALGKPLTGDRNAGKRESGVVFQQF CCCCCEEEEEECCCEEEEEECCHHEECCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEC EGGVITAKNDAPGTPAYITLGKIREAWNVPRGADGTPEITGTNGSAGPLGSPVSDQSSVG CCCEEEECCCCCCCCEEEEHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHH DVLVSNFEHGTIQYNPKTDQVAVTVNGKVVPSGL HHHHHCCCCCEEEECCCCCEEEEEECCEEECCCC >Mature Secondary Structure THSIGRRERNPVKTTAHRRSAVVGLAAVALITVGCSNGKSVDASAPPHAAASATSTSAN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCC PAQPTEVNLIGESNVEVTLTGPIAAKYASATDDQKKALGKPLTGDRNAGKRESGVVFQQF CCCCCEEEEEECCCEEEEEECCHHEECCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEC EGGVITAKNDAPGTPAYITLGKIREAWNVPRGADGTPEITGTNGSAGPLGSPVSDQSSVG CCCEEEECCCCCCCCEEEEHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHH DVLVSNFEHGTIQYNPKTDQVAVTVNGKVVPSGL HHHHHCCCCCEEEECCCCCEEEEEECCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA