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The map label for this gene is yhfW [H]

Identifier: 41407770

GI number: 41407770

Start: 1826284

End: 1827852

Strand: Direct

Name: yhfW [H]

Synonym: MAP1672

Alternate gene names: 41407770

Gene position: 1826284-1827852 (Clockwise)

Preceding gene: 41407769

Following gene: 41407773

Centisome position: 37.81

GC content: 71.0

Gene sequence:

>1569_bases
CTGAGCCCGCGGCGTTTCTTCGGGCCGGGCCGGGGTATCAGCACAGCCGTGACTTCTTTGTGGATGAGCGAGCGCACCGA
ACGTCCTTGGGCCGCAAGCCAGCTTGACCAGGGGCCGGCGTCCGCCGACGTGATCGTGGTGGGCGCCGGCATCACCGGCC
TGATGACGGCGGCGCTGCTGGCCCGCGCGGGCAAGGACGTGCTGGTGCTGGAGGCGCGCACGGTGGGTGCCTGCGCGACC
GGCAACACCACCGCGAAAATCAGCCTGCTGCAAGGCAGCCAGCTGTCCAAGGTGCTGCCGCGGCACGGCCGGGAGGTGAC
GCGCGCGTACGTGGACGGCAACCGCGAGGGCCAGGAATGGGTGTTGGGCCACTGCGAGGCGCACGGCGTGGCGGTGCAAC
GCGAAGACGCCTACACCTACGCCCAGTCCGTCCGGGGCGTGCCGTCAGCGCGCGCCGAGTTCGAGGCCTGTCAGGCGGTC
GGGCTCCCGGTGGTGTGGCAGGACGACGCCGACGTGCCGTTCGCCTATCACGGCGGGGTGCGGCTGGCCGACCAGGCGCA
GTTCGACCCGATGCCCTTCCTCGACTCGCTGGCCGTCGAACTGCTCGGCCGCGGCGGCCGGCTGGTCGAGCACACCCGGG
TGCGCCGCGTGTCCTGGCGCGGCAAGGGGGTGCGCGTGCACGTCAACCAGGGCAGCGATGCCGCCGGCCACGACGTCGAA
CTGCACGCCGACCAGCTGGTGCTCGCCACCGGCATCCCGATCCTGGATCGCGGCGGCTATTTCGCCCGGGTCAAGCCCAG
CCGGTCCTACTGCCTGGCCTTCAAGGTCCCCGGCAACATCACCCGGCCGATGATGATCTCCACCGACTCGCCGACCCGTT
CGGTGCGGTACGCGCCGGTGCCCGACGGGGAGCGGCTGATCGTGGGCGGCGCGGGTCATACCGTGGGCCGCGAGAAGAGC
CCGTCCGATGCGCTGGATGAACTGTCGGCCTGGACCCGCAAGCATTTTCCGGGTGCGGTGCAGACTCACTTCTGGTCGGC
CCAGGACTACACGCCCATCGACCACCTGCCCTACGTGGGCCCCATCCTGCCCAACAGCGAAACCATTTTCGTGGCAACGG
GTTTCAACAAGTGGGGGATGACCAACGGGGCCGCGGCGGCGTTGGCGCTGTCCAGCCGGATCCTGGGCGGGCGAATGGAC
TGGGCGCGCGCGTTCGCCAGCTGGAGCCCGCACGAGCTGTCGGGTCTGGCCACCGCCGTGCAGGCCAACCTCGAGGTCGG
CTTCAACCTGACCAAGGGCTGGGTCACTCCGGCGGTGCGGATCGGGCGCCGCAGCCCGGTCGACGGTGACGGCGGTGTGG
TCAGCGGCCCGCCGTGGCACCTACAGGCCCGCTGCCGCGTCGACGGCACCGAGCACCGCGTGTCACCGGTGTGTCCCCAT
CTGGGCGGCATCGTGAACTGGAACGACGCCGACAAGGCGTGGGAATGCCCGCTGCACGGGTCGCGCTTCGCACCCGACGG
CACCTTGCTGGAAGGACCGGCGACCCGGGACCTGACCGCGTCGCGCTGA

Upstream 100 bases:

>100_bases
GGGAACTGCGCGGCGCCGAGGGCGACTGCGACACGGCGGAAAAGGCCAGCCACGCCGCCGCGGAAACGCTGCAGCAGGCC
AGCGCCCGGCTACGACAGGG

Downstream 100 bases:

>100_bases
GCGACTCATCCGGCGCGGGTCTTGGCGAAGACGATCCAGCGCAGTTCGATCGGGGAGTCGTCCCGTTCGACGTCGAACAC
GTCGAGGCCACCGGCCCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 521

Protein sequence:

>522_residues
MSPRRFFGPGRGISTAVTSLWMSERTERPWAASQLDQGPASADVIVVGAGITGLMTAALLARAGKDVLVLEARTVGACAT
GNTTAKISLLQGSQLSKVLPRHGREVTRAYVDGNREGQEWVLGHCEAHGVAVQREDAYTYAQSVRGVPSARAEFEACQAV
GLPVVWQDDADVPFAYHGGVRLADQAQFDPMPFLDSLAVELLGRGGRLVEHTRVRRVSWRGKGVRVHVNQGSDAAGHDVE
LHADQLVLATGIPILDRGGYFARVKPSRSYCLAFKVPGNITRPMMISTDSPTRSVRYAPVPDGERLIVGGAGHTVGREKS
PSDALDELSAWTRKHFPGAVQTHFWSAQDYTPIDHLPYVGPILPNSETIFVATGFNKWGMTNGAAAALALSSRILGGRMD
WARAFASWSPHELSGLATAVQANLEVGFNLTKGWVTPAVRIGRRSPVDGDGGVVSGPPWHLQARCRVDGTEHRVSPVCPH
LGGIVNWNDADKAWECPLHGSRFAPDGTLLEGPATRDLTASR

Sequences:

>Translated_522_residues
MSPRRFFGPGRGISTAVTSLWMSERTERPWAASQLDQGPASADVIVVGAGITGLMTAALLARAGKDVLVLEARTVGACAT
GNTTAKISLLQGSQLSKVLPRHGREVTRAYVDGNREGQEWVLGHCEAHGVAVQREDAYTYAQSVRGVPSARAEFEACQAV
GLPVVWQDDADVPFAYHGGVRLADQAQFDPMPFLDSLAVELLGRGGRLVEHTRVRRVSWRGKGVRVHVNQGSDAAGHDVE
LHADQLVLATGIPILDRGGYFARVKPSRSYCLAFKVPGNITRPMMISTDSPTRSVRYAPVPDGERLIVGGAGHTVGREKS
PSDALDELSAWTRKHFPGAVQTHFWSAQDYTPIDHLPYVGPILPNSETIFVATGFNKWGMTNGAAAALALSSRILGGRMD
WARAFASWSPHELSGLATAVQANLEVGFNLTKGWVTPAVRIGRRSPVDGDGGVVSGPPWHLQARCRVDGTEHRVSPVCPH
LGGIVNWNDADKAWECPLHGSRFAPDGTLLEGPATRDLTASR
>Mature_521_residues
SPRRFFGPGRGISTAVTSLWMSERTERPWAASQLDQGPASADVIVVGAGITGLMTAALLARAGKDVLVLEARTVGACATG
NTTAKISLLQGSQLSKVLPRHGREVTRAYVDGNREGQEWVLGHCEAHGVAVQREDAYTYAQSVRGVPSARAEFEACQAVG
LPVVWQDDADVPFAYHGGVRLADQAQFDPMPFLDSLAVELLGRGGRLVEHTRVRRVSWRGKGVRVHVNQGSDAAGHDVEL
HADQLVLATGIPILDRGGYFARVKPSRSYCLAFKVPGNITRPMMISTDSPTRSVRYAPVPDGERLIVGGAGHTVGREKSP
SDALDELSAWTRKHFPGAVQTHFWSAQDYTPIDHLPYVGPILPNSETIFVATGFNKWGMTNGAAAALALSSRILGGRMDW
ARAFASWSPHELSGLATAVQANLEVGFNLTKGWVTPAVRIGRRSPVDGDGGVVSGPPWHLQARCRVDGTEHRVSPVCPHL
GGIVNWNDADKAWECPLHGSRFAPDGTLLEGPATRDLTASR

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR017941
- InterPro:   IPR005805 [H]

Pfam domain/function: PF01266 DAO; PF00355 Rieske [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 56094; Mature: 55963

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRRFFGPGRGISTAVTSLWMSERTERPWAASQLDQGPASADVIVVGAGITGLMTAALL
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEEECCHHHHHHHHHH
ARAGKDVLVLEARTVGACATGNTTAKISLLQGSQLSKVLPRHGREVTRAYVDGNREGQEW
HHCCCCEEEEEECCCCEEECCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCHH
VLGHCEAHGVAVQREDAYTYAQSVRGVPSARAEFEACQAVGLPVVWQDDADVPFAYHGGV
EEEECCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEECCCCCCCEEECCCE
RLADQAQFDPMPFLDSLAVELLGRGGRLVEHTRVRRVSWRGKGVRVHVNQGSDAAGHDVE
EEECCCCCCCCCHHHHHHHHHHCCCCCEEHHHHEEEEEECCCCEEEEEECCCCCCCCCEE
LHADQLVLATGIPILDRGGYFARVKPSRSYCLAFKVPGNITRPMMISTDSPTRSVRYAPV
EECCCEEEECCCCEEECCCEEEEECCCCCEEEEEECCCCCCCCEEEECCCCCCCEEECCC
PDGERLIVGGAGHTVGREKSPSDALDELSAWTRKHFPGAVQTHFWSAQDYTPIDHLPYVG
CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHEEECCCCCCCCCCCCCCC
PILPNSETIFVATGFNKWGMTNGAAAALALSSRILGGRMDWARAFASWSPHELSGLATAV
CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH
QANLEVGFNLTKGWVTPAVRIGRRSPVDGDGGVVSGPPWHLQARCRVDGTEHRVSPVCPH
EECEEECEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHH
LGGIVNWNDADKAWECPLHGSRFAPDGTLLEGPATRDLTASR
HCCEECCCCCCCCEECCCCCCCCCCCCCEECCCCCCCCCCCC
>Mature Secondary Structure 
SPRRFFGPGRGISTAVTSLWMSERTERPWAASQLDQGPASADVIVVGAGITGLMTAALL
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEEECCHHHHHHHHHH
ARAGKDVLVLEARTVGACATGNTTAKISLLQGSQLSKVLPRHGREVTRAYVDGNREGQEW
HHCCCCEEEEEECCCCEEECCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCHH
VLGHCEAHGVAVQREDAYTYAQSVRGVPSARAEFEACQAVGLPVVWQDDADVPFAYHGGV
EEEECCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEECCCCCCCEEECCCE
RLADQAQFDPMPFLDSLAVELLGRGGRLVEHTRVRRVSWRGKGVRVHVNQGSDAAGHDVE
EEECCCCCCCCCHHHHHHHHHHCCCCCEEHHHHEEEEEECCCCEEEEEECCCCCCCCCEE
LHADQLVLATGIPILDRGGYFARVKPSRSYCLAFKVPGNITRPMMISTDSPTRSVRYAPV
EECCCEEEECCCCEEECCCEEEEECCCCCEEEEEECCCCCCCCEEEECCCCCCCEEECCC
PDGERLIVGGAGHTVGREKSPSDALDELSAWTRKHFPGAVQTHFWSAQDYTPIDHLPYVG
CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHEEECCCCCCCCCCCCCCC
PILPNSETIFVATGFNKWGMTNGAAAALALSSRILGGRMDWARAFASWSPHELSGLATAV
CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH
QANLEVGFNLTKGWVTPAVRIGRRSPVDGDGGVVSGPPWHLQARCRVDGTEHRVSPVCPH
EECEEECEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHH
LGGIVNWNDADKAWECPLHGSRFAPDGTLLEGPATRDLTASR
HCCEECCCCCCCCEECCCCCCCCCCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]