| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407698
Identifier: 41407698
GI number: 41407698
Start: 1756715
End: 1757833
Strand: Direct
Name: 41407698
Synonym: MAP1600
Alternate gene names: NA
Gene position: 1756715-1757833 (Clockwise)
Preceding gene: 41407697
Following gene: 41407699
Centisome position: 36.37
GC content: 70.06
Gene sequence:
>1119_bases ATGGTCTCCGACACCGATGCCCTGGCCGAACACATCGGCGCCGTGTCGCTGATCGACCAGCACGTCCACGGCTGCTGGCT GACGGCCGGCGGGCGGCGACGATTCGAGAACGCGCTGAACGAGGCCAACACCGAGCCGATCACCGGTTCGGGTTTCGACT CGCAGCTCGGGTTCGCCGTGCGCGCCCACTGCGCTCCCATCCTGGGGCTGCCCAGACACGCCGACCCGCAGTCCTATTGG GAGCGCCGTTGCCAACTCAGCGAACACGAACTGGCGCGGCTGTTCCTGCCGGCCGCCGGGGTCAGTAACTGGTTGGTGGA CACCGGAATCGGGCACGGCGTGGTCGCCGGTGTCGCCGAGATGGCCGAGCTGGCGGCCGGCCCCGCGGCCGAGCTGGTGC GTCTCGAGGAGGTCGCCGAGCAGGCGGCGCAAGCGCCGGGCGACTACGCGGCGGCCTTCGACGAGGTCCTGGCCGCGCGG GCGGCCGGCGCGGTCGGCACCAAATCGATCCTGGCCTACCGGGGCGGGTTCGACGGAGACCTGAGCGAGCCGTCGGCGAC CGAGGTCGCCCGGGCGGCGGCCCGGTGGCGCGAGCTCGGCGGCACCCGGTTGCGCGATCGGGTGCTGCTGCGGTTCGGGC TGCACCGGGCGCTGCGGTTGGGCAAGCCGCTGCAATTGCACGTCGGGTTCGGCGATCGTGATTGCGATCTGCACAAGGCC AATCCGCTGCTGCTGCTTGACTTCCTGCGCCACAGCGGAGATGCGCCGATCGTGTTGCTGCACTGCTATCCCTACGAGCG GGAGGCCGGCTACCTGGCGCAGGCCTTCAACAACGTCTACGTCGACGGCGGGTTGAGCGTGAACCACTTGGGGGCGCGGT CGCCGGCGTTCTTGGCGCGCCTGCTGGAGCTGGCGCCGTTTTCCAAGATCCTGTATTCCTCCGACGGATTCGGTCCCGCC GAACTGCATTTTTTGGGAGCGGTGCTGTGGCGCAGGGGTATTCACCGCGTGCTGCGCGAGTTCGTCGAAGCCGGCGACTG GGGCCGCGCCGACGCCATCCGGGTGGTCGATCTGATCGCCCGCGAGAACGCCGCGCGCCTCTACGGCCTGGCGCCGTAA
Upstream 100 bases:
>100_bases GTGGCGGTGCGCCGCTTGGAGCAGGAACGCTACGGCGACCTGGACCCCGCGCAACTGGCGGACCGGTTCCGCATGGCCTG GAGCCTGTGACGACGCCGCC
Downstream 100 bases:
>100_bases CCGGCCGCCGGGCCCGATGGGCCGGGCCGCGCCGGTGCGACGCCGGGCGCGAATTTTCCCGATTCCGCCTGTTATTGACA ACGCCGTCAGCTAGGCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MVSDTDALAEHIGAVSLIDQHVHGCWLTAGGRRRFENALNEANTEPITGSGFDSQLGFAVRAHCAPILGLPRHADPQSYW ERRCQLSEHELARLFLPAAGVSNWLVDTGIGHGVVAGVAEMAELAAGPAAELVRLEEVAEQAAQAPGDYAAAFDEVLAAR AAGAVGTKSILAYRGGFDGDLSEPSATEVARAAARWRELGGTRLRDRVLLRFGLHRALRLGKPLQLHVGFGDRDCDLHKA NPLLLLDFLRHSGDAPIVLLHCYPYEREAGYLAQAFNNVYVDGGLSVNHLGARSPAFLARLLELAPFSKILYSSDGFGPA ELHFLGAVLWRRGIHRVLREFVEAGDWGRADAIRVVDLIARENAARLYGLAP
Sequences:
>Translated_372_residues MVSDTDALAEHIGAVSLIDQHVHGCWLTAGGRRRFENALNEANTEPITGSGFDSQLGFAVRAHCAPILGLPRHADPQSYW ERRCQLSEHELARLFLPAAGVSNWLVDTGIGHGVVAGVAEMAELAAGPAAELVRLEEVAEQAAQAPGDYAAAFDEVLAAR AAGAVGTKSILAYRGGFDGDLSEPSATEVARAAARWRELGGTRLRDRVLLRFGLHRALRLGKPLQLHVGFGDRDCDLHKA NPLLLLDFLRHSGDAPIVLLHCYPYEREAGYLAQAFNNVYVDGGLSVNHLGARSPAFLARLLELAPFSKILYSSDGFGPA ELHFLGAVLWRRGIHRVLREFVEAGDWGRADAIRVVDLIARENAARLYGLAP >Mature_372_residues MVSDTDALAEHIGAVSLIDQHVHGCWLTAGGRRRFENALNEANTEPITGSGFDSQLGFAVRAHCAPILGLPRHADPQSYW ERRCQLSEHELARLFLPAAGVSNWLVDTGIGHGVVAGVAEMAELAAGPAAELVRLEEVAEQAAQAPGDYAAAFDEVLAAR AAGAVGTKSILAYRGGFDGDLSEPSATEVARAAARWRELGGTRLRDRVLLRFGLHRALRLGKPLQLHVGFGDRDCDLHKA NPLLLLDFLRHSGDAPIVLLHCYPYEREAGYLAQAFNNVYVDGGLSVNHLGARSPAFLARLLELAPFSKILYSSDGFGPA ELHFLGAVLWRRGIHRVLREFVEAGDWGRADAIRVVDLIARENAARLYGLAP
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40238; Mature: 40238
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSDTDALAEHIGAVSLIDQHVHGCWLTAGGRRRFENALNEANTEPITGSGFDSQLGFAV CCCCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH RAHCAPILGLPRHADPQSYWERRCQLSEHELARLFLPAAGVSNWLVDTGIGHGVVAGVAE HHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHH MAELAAGPAAELVRLEEVAEQAAQAPGDYAAAFDEVLAARAAGAVGTKSILAYRGGFDGD HHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC LSEPSATEVARAAARWRELGGTRLRDRVLLRFGLHRALRLGKPLQLHVGFGDRDCDLHKA CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC NPLLLLDFLRHSGDAPIVLLHCYPYEREAGYLAQAFNNVYVDGGLSVNHLGARSPAFLAR CHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHCCEEECCCCEECCCCCCCHHHHHH LLELAPFSKILYSSDGFGPAELHFLGAVLWRRGIHRVLREFVEAGDWGRADAIRVVDLIA HHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH RENAARLYGLAP HCCCHHHCCCCC >Mature Secondary Structure MVSDTDALAEHIGAVSLIDQHVHGCWLTAGGRRRFENALNEANTEPITGSGFDSQLGFAV CCCCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH RAHCAPILGLPRHADPQSYWERRCQLSEHELARLFLPAAGVSNWLVDTGIGHGVVAGVAE HHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHH MAELAAGPAAELVRLEEVAEQAAQAPGDYAAAFDEVLAARAAGAVGTKSILAYRGGFDGD HHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC LSEPSATEVARAAARWRELGGTRLRDRVLLRFGLHRALRLGKPLQLHVGFGDRDCDLHKA CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC NPLLLLDFLRHSGDAPIVLLHCYPYEREAGYLAQAFNNVYVDGGLSVNHLGARSPAFLAR CHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHCCEEECCCCEECCCCCCCHHHHHH LLELAPFSKILYSSDGFGPAELHFLGAVLWRRGIHRVLREFVEAGDWGRADAIRVVDLIA HHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH RENAARLYGLAP HCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA