| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407695
Identifier: 41407695
GI number: 41407695
Start: 1753902
End: 1754396
Strand: Direct
Name: 41407695
Synonym: MAP1597
Alternate gene names: NA
Gene position: 1753902-1754396 (Clockwise)
Preceding gene: 41407694
Following gene: 41407696
Centisome position: 36.31
GC content: 68.28
Gene sequence:
>495_bases ATGAGCCGAATCGGAACATTTGCTGACGACGACCTGGCCGGCTGGTTCGTGAAATCTCCGGACATCGGCGCCGCGCTGGG CGCGTTCAGCCAGGCGGTCTACACCAAGAACCGGTTGCCGTTGCGCACCCGGGAGCTGGCCCGCGCCGTGATCGCCCACC GCAACGAGTGCGTCGTGTGCGTCAACACCCGCGACGAGGACGGCCCGGCGGCGGGCGTCGATGAGGAGCTGTACGACCAC GTCCATGAGTGGCGCACCTGGCCCGGCTACAGCGAACAGGAGCGGCTGGCAGCCGAATTCGCGGACCGCTTCGCGACCGA TCACACCGGTCTGCGCGACGACGAAGACTTCTGGAGCCGCTGCGCCGAGCACTTCTCCGACGAGTTGCTCGCCGATCTGG CCCTGTCCTGCGCGCTGTGGGTCGGCATGGGCCGGGTGCTGCGGACCCTCGACATCGGGCAGGCCTGCAAGCTGACCATC CCCAGCCGCGGATAG
Upstream 100 bases:
>100_bases GCATGACGAGCAGCCGACCGCGGCGATCACGGCGGCGGCTCGCTAGCCGGGCCGAGCACTCGTCGCCGGCGGCCGGCGAA CCCGGGCGTACCATCACGCC
Downstream 100 bases:
>100_bases CCCGGCGTGCGACGCCGACGGGGGAGGCGCCGATGAAGATCCGCTTCGGCGTCGGGCTGGGCGCCGATACCGCCCCCGAC GGGCTGGGCGCCATCGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSRIGTFADDDLAGWFVKSPDIGAALGAFSQAVYTKNRLPLRTRELARAVIAHRNECVVCVNTRDEDGPAAGVDEELYDH VHEWRTWPGYSEQERLAAEFADRFATDHTGLRDDEDFWSRCAEHFSDELLADLALSCALWVGMGRVLRTLDIGQACKLTI PSRG
Sequences:
>Translated_164_residues MSRIGTFADDDLAGWFVKSPDIGAALGAFSQAVYTKNRLPLRTRELARAVIAHRNECVVCVNTRDEDGPAAGVDEELYDH VHEWRTWPGYSEQERLAAEFADRFATDHTGLRDDEDFWSRCAEHFSDELLADLALSCALWVGMGRVLRTLDIGQACKLTI PSRG >Mature_163_residues SRIGTFADDDLAGWFVKSPDIGAALGAFSQAVYTKNRLPLRTRELARAVIAHRNECVVCVNTRDEDGPAAGVDEELYDHV HEWRTWPGYSEQERLAAEFADRFATDHTGLRDDEDFWSRCAEHFSDELLADLALSCALWVGMGRVLRTLDIGQACKLTIP SRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18344; Mature: 18212
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIGTFADDDLAGWFVKSPDIGAALGAFSQAVYTKNRLPLRTRELARAVIAHRNECVVC CCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEE VNTRDEDGPAAGVDEELYDHVHEWRTWPGYSEQERLAAEFADRFATDHTGLRDDEDFWSR ECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHH CAEHFSDELLADLALSCALWVGMGRVLRTLDIGQACKLTIPSRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC >Mature Secondary Structure SRIGTFADDDLAGWFVKSPDIGAALGAFSQAVYTKNRLPLRTRELARAVIAHRNECVVC CCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEE VNTRDEDGPAAGVDEELYDHVHEWRTWPGYSEQERLAAEFADRFATDHTGLRDDEDFWSR ECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHH CAEHFSDELLADLALSCALWVGMGRVLRTLDIGQACKLTIPSRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA