| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yebQ [C]
Identifier: 41407694
GI number: 41407694
Start: 1751778
End: 1753847
Strand: Direct
Name: yebQ [C]
Synonym: MAP1596
Alternate gene names: 41407694
Gene position: 1751778-1753847 (Clockwise)
Preceding gene: 41407693
Following gene: 41407695
Centisome position: 36.27
GC content: 68.31
Gene sequence:
>2070_bases ATGACGACCCCGAGAGCAGCAGTGAATGCACCGGCCCGCGCCGATACCGGATCCGGCGGTGAGCGGATCAGCCCGCAGCG GCGCAACCTGATCTTCGTCGCGATCGTGCTCGGCATGCTGCTCGCGGCGTTGGACCAGACCATCGTGGCGACCGCGCTGC CGACCATCGTGGCCAACCTGGGCGATGCCGGCCATCAGTCCTGGGTCGTGACCAGCTATTTGCTCGCCTCGACCATTGTC ACCGCGCTGGTGGGCAAGCTCGGCGATCTGTACGGCCGCAAGCGCGTCTTCCAGGCCGCCGTCCTGTTCTTCGTGGCCGG CTCGGTCCTGTGCGGACTGGCCCAGTCGATGGCCATGTTGGTGGGAGCGCGTGCGCTGCAGGGCATCGGCGGCGGCGGGA TCACCGTCACCGCCAGCGCGCTGATCGGTGAGGTCGTTCCGCTGCGGGAGCGGGGCCGGTACCAGGGCATCCTCGGGGCG GTGTTCGGCGTCACCACGGTCATCGGCCCGCTGTTGGGCGGCTATTTCACCGATTACCTGAGCTGGCGCTGGGCGTTCTG GGTGAACGTGCCGGTCTCGGTGATCGTCATTTTCGTTGCCGCCGCGGCGATTCCCGCGCTGGCCGCGTCGGCCAAACCGG TGATCGACTACGCCGGAATCGTTTTCGTCGGCCTGGGCGCGGCCGGCCTGACGTTGGCCACCAGCTGGGGCGGCAGTCGC TATCCGTGGGGCTCGCCGACGATCACCGGCCTGTTCGCCGCCGCCGCGGTGGCGCTCGGTGTTTTCGTGGTGGTGGAACG CCGCGCCGCCGAGCCCATTCTGCCGGTCCGCTTGTTCGCCAGCCCGGTGTTCACCGTGTGCTGCGTGCTGTCCTTCGTGG TGGGTTTCGCCATGTTGGGCGCGATGACGTTCCTGCCCACCTACATGCAATACGTCGACGGGGTCTCGGCCACCACGTCG GGGTTGCGCACCCTGCCCATGGTGGTGGGCATGCTGTTCACCTCGACCGGCAGCGGCACCATCGTCGGGCGCACCGGCCG GTACAAGATCTTCCCCGTGGCCGGCACCGCGCTGATGGCGTTGGCGTTCCTGCTGATGTCGCGGATGCAGCCGTCGACCC CGGCGGTGATCCAGTCGCTGTATCTGTTCATCCTGGGCGCCGGCATCGGGCTGTCCATGCAGGTGCTGATCCTGATCGTG CAGAACACGTCGGACTTCGAAGATCTCGGCGTCGCCACGTCCGGGGTGAGGTTCTTTCGGACCATCGGAAGTTCCTTCGG CGCAGCGATATTCGGCTCGTTGTTCGTGAACTTCCTGAACCGCCGGATCGGTCCGGCGCTGGCGGCCAGCGGCGCGCCGC CCGGCGCGGTCAGCTCGCCGGGCGCCCTACACCGCCAGCCTCATGAGGTGGCCGCGCCCATCGTGGCGGCCTATGCGGAA TCGCTCACCGAGGTGTTCTTCTGGGCGGCCCCGGTCGCACTGGTGGGTTTCGTGCTGGCGCTGTTCCTGCGCGAAATCCC GCTGCGCGACATCCACGACAGCACAGTCGATCTCGGTGACGCATTCGGCATGCCGACCACCGAGACACCCGACCAGATGC TGGAGAACGCGATCGCCCGGATGTTGCGCGGCGAGACCGGGATGCGGTTGCGCAGCATCGCGATGCGACCCGATTGCCGG CTCGACGTCGCCGGGTTGTGGGGAGTGTTGCGCATCAACCGCTACACCCAGATGTACGGGGCCGCGCGACTCACCGACAT GGCGGAGTATCTGCGGATTCCGTTCGAGGTGCTCGAGCCGACCTTCTCGCGCCTGGTCACCGCCGGTTACGCGGGCAGCG ACGGCGACCGGCTGTGGCTCACCCCGGCCGGGGCCCAGCAGGTCGGCTACGTGCATTCGCTGCTGTTGGCCTGGCTGGTC GACAAACTCGGGCGGTCGCCCGGCTTCGAGGGGCGCCCGGACCGCCAAGCGGTGCAGGCCGCCCTGGAACGCGTCGCGTA TCGCGTTCTCGCCCAACGTGATTGGCATGACGAGCAGCCGACCGCGGCGATCACGGCGGCGGCTCGCTAG
Upstream 100 bases:
>100_bases ATGCCGGGGCGGCACGGCGCGCCCTCGGGGTCAGCGGGCTGACAGGTCCACGCCGACAGCTGGGTACTCATAGCCGACGC CGACGCGACGGAAGGCAGCC
Downstream 100 bases:
>100_bases CCGGGCCGAGCACTCGTCGCCGGCGGCCGGCGAACCCGGGCGTACCATCACGCCATGAGCCGAATCGGAACATTTGCTGA CGACGACCTGGCCGGCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 689; Mature: 688
Protein sequence:
>689_residues MTTPRAAVNAPARADTGSGGERISPQRRNLIFVAIVLGMLLAALDQTIVATALPTIVANLGDAGHQSWVVTSYLLASTIV TALVGKLGDLYGRKRVFQAAVLFFVAGSVLCGLAQSMAMLVGARALQGIGGGGITVTASALIGEVVPLRERGRYQGILGA VFGVTTVIGPLLGGYFTDYLSWRWAFWVNVPVSVIVIFVAAAAIPALAASAKPVIDYAGIVFVGLGAAGLTLATSWGGSR YPWGSPTITGLFAAAAVALGVFVVVERRAAEPILPVRLFASPVFTVCCVLSFVVGFAMLGAMTFLPTYMQYVDGVSATTS GLRTLPMVVGMLFTSTGSGTIVGRTGRYKIFPVAGTALMALAFLLMSRMQPSTPAVIQSLYLFILGAGIGLSMQVLILIV QNTSDFEDLGVATSGVRFFRTIGSSFGAAIFGSLFVNFLNRRIGPALAASGAPPGAVSSPGALHRQPHEVAAPIVAAYAE SLTEVFFWAAPVALVGFVLALFLREIPLRDIHDSTVDLGDAFGMPTTETPDQMLENAIARMLRGETGMRLRSIAMRPDCR LDVAGLWGVLRINRYTQMYGAARLTDMAEYLRIPFEVLEPTFSRLVTAGYAGSDGDRLWLTPAGAQQVGYVHSLLLAWLV DKLGRSPGFEGRPDRQAVQAALERVAYRVLAQRDWHDEQPTAAITAAAR
Sequences:
>Translated_689_residues MTTPRAAVNAPARADTGSGGERISPQRRNLIFVAIVLGMLLAALDQTIVATALPTIVANLGDAGHQSWVVTSYLLASTIV TALVGKLGDLYGRKRVFQAAVLFFVAGSVLCGLAQSMAMLVGARALQGIGGGGITVTASALIGEVVPLRERGRYQGILGA VFGVTTVIGPLLGGYFTDYLSWRWAFWVNVPVSVIVIFVAAAAIPALAASAKPVIDYAGIVFVGLGAAGLTLATSWGGSR YPWGSPTITGLFAAAAVALGVFVVVERRAAEPILPVRLFASPVFTVCCVLSFVVGFAMLGAMTFLPTYMQYVDGVSATTS GLRTLPMVVGMLFTSTGSGTIVGRTGRYKIFPVAGTALMALAFLLMSRMQPSTPAVIQSLYLFILGAGIGLSMQVLILIV QNTSDFEDLGVATSGVRFFRTIGSSFGAAIFGSLFVNFLNRRIGPALAASGAPPGAVSSPGALHRQPHEVAAPIVAAYAE SLTEVFFWAAPVALVGFVLALFLREIPLRDIHDSTVDLGDAFGMPTTETPDQMLENAIARMLRGETGMRLRSIAMRPDCR LDVAGLWGVLRINRYTQMYGAARLTDMAEYLRIPFEVLEPTFSRLVTAGYAGSDGDRLWLTPAGAQQVGYVHSLLLAWLV DKLGRSPGFEGRPDRQAVQAALERVAYRVLAQRDWHDEQPTAAITAAAR >Mature_688_residues TTPRAAVNAPARADTGSGGERISPQRRNLIFVAIVLGMLLAALDQTIVATALPTIVANLGDAGHQSWVVTSYLLASTIVT ALVGKLGDLYGRKRVFQAAVLFFVAGSVLCGLAQSMAMLVGARALQGIGGGGITVTASALIGEVVPLRERGRYQGILGAV FGVTTVIGPLLGGYFTDYLSWRWAFWVNVPVSVIVIFVAAAAIPALAASAKPVIDYAGIVFVGLGAAGLTLATSWGGSRY PWGSPTITGLFAAAAVALGVFVVVERRAAEPILPVRLFASPVFTVCCVLSFVVGFAMLGAMTFLPTYMQYVDGVSATTSG LRTLPMVVGMLFTSTGSGTIVGRTGRYKIFPVAGTALMALAFLLMSRMQPSTPAVIQSLYLFILGAGIGLSMQVLILIVQ NTSDFEDLGVATSGVRFFRTIGSSFGAAIFGSLFVNFLNRRIGPALAASGAPPGAVSSPGALHRQPHEVAAPIVAAYAES LTEVFFWAAPVALVGFVLALFLREIPLRDIHDSTVDLGDAFGMPTTETPDQMLENAIARMLRGETGMRLRSIAMRPDCRL DVAGLWGVLRINRYTQMYGAARLTDMAEYLRIPFEVLEPTFSRLVTAGYAGSDGDRLWLTPAGAQQVGYVHSLLLAWLVD KLGRSPGFEGRPDRQAVQAALERVAYRVLAQRDWHDEQPTAAITAAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=418, Percent_Identity=30.3827751196172, Blast_Score=140, Evalue=3e-34, Organism=Escherichia coli, GI1789042, Length=407, Percent_Identity=26.7813267813268, Blast_Score=131, Evalue=1e-31, Organism=Escherichia coli, GI1788710, Length=317, Percent_Identity=28.7066246056782, Blast_Score=117, Evalue=3e-27, Organism=Escherichia coli, GI1788392, Length=339, Percent_Identity=31.2684365781711, Blast_Score=108, Evalue=8e-25, Organism=Escherichia coli, GI1790195, Length=381, Percent_Identity=26.246719160105, Blast_Score=102, Evalue=8e-23, Organism=Escherichia coli, GI1790146, Length=178, Percent_Identity=30.3370786516854, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1788509, Length=158, Percent_Identity=29.1139240506329, Blast_Score=63, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6322958, Length=562, Percent_Identity=23.8434163701068, Blast_Score=137, Evalue=7e-33, Organism=Saccharomyces cerevisiae, GI6323735, Length=297, Percent_Identity=30.976430976431, Blast_Score=127, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6319770, Length=386, Percent_Identity=29.2746113989637, Blast_Score=124, Evalue=6e-29, Organism=Saccharomyces cerevisiae, GI6325455, Length=254, Percent_Identity=28.3464566929134, Blast_Score=110, Evalue=5e-25, Organism=Saccharomyces cerevisiae, GI6321663, Length=534, Percent_Identity=23.4082397003745, Blast_Score=104, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6319783, Length=475, Percent_Identity=22.7368421052632, Blast_Score=95, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6324954, Length=392, Percent_Identity=24.234693877551, Blast_Score=82, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001958 - InterPro: IPR011991 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 72901; Mature: 72770
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPRAAVNAPARADTGSGGERISPQRRNLIFVAIVLGMLLAALDQTIVATALPTIVANL CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GDAGHQSWVVTSYLLASTIVTALVGKLGDLYGRKRVFQAAVLFFVAGSVLCGLAQSMAML CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGARALQGIGGGGITVTASALIGEVVPLRERGRYQGILGAVFGVTTVIGPLLGGYFTDYL HHHHHHHCCCCCCHHEEHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SWRWAFWVNVPVSVIVIFVAAAAIPALAASAKPVIDYAGIVFVGLGAAGLTLATSWGGSR HHHEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHEEECCCCCC YPWGSPTITGLFAAAAVALGVFVVVERRAAEPILPVRLFASPVFTVCCVLSFVVGFAMLG CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AMTFLPTYMQYVDGVSATTSGLRTLPMVVGMLFTSTGSGTIVGRTGRYKIFPVAGTALMA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECHHHHHHH LAFLLMSRMQPSTPAVIQSLYLFILGAGIGLSMQVLILIVQNTSDFEDLGVATSGVRFFR HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHEEHHEEEECCCCCHHHHCCHHHHHHHHH TIGSSFGAAIFGSLFVNFLNRRIGPALAASGAPPGAVSSPGALHRQPHEVAAPIVAAYAE HHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH SLTEVFFWAAPVALVGFVLALFLREIPLRDIHDSTVDLGDAFGMPTTETPDQMLENAIAR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHCCCCCCCCHHHHHHHHHHH MLRGETGMRLRSIAMRPDCRLDVAGLWGVLRINRYTQMYGAARLTDMAEYLRIPFEVLEP HHCCCCCCHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH TFSRLVTAGYAGSDGDRLWLTPAGAQQVGYVHSLLLAWLVDKLGRSPGFEGRPDRQAVQA HHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH ALERVAYRVLAQRDWHDEQPTAAITAAAR HHHHHHHHHHHHCCCCCCCCCHHHCCCCC >Mature Secondary Structure TTPRAAVNAPARADTGSGGERISPQRRNLIFVAIVLGMLLAALDQTIVATALPTIVANL CCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GDAGHQSWVVTSYLLASTIVTALVGKLGDLYGRKRVFQAAVLFFVAGSVLCGLAQSMAML CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGARALQGIGGGGITVTASALIGEVVPLRERGRYQGILGAVFGVTTVIGPLLGGYFTDYL HHHHHHHCCCCCCHHEEHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SWRWAFWVNVPVSVIVIFVAAAAIPALAASAKPVIDYAGIVFVGLGAAGLTLATSWGGSR HHHEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHEEECCCCCC YPWGSPTITGLFAAAAVALGVFVVVERRAAEPILPVRLFASPVFTVCCVLSFVVGFAMLG CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AMTFLPTYMQYVDGVSATTSGLRTLPMVVGMLFTSTGSGTIVGRTGRYKIFPVAGTALMA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECHHHHHHH LAFLLMSRMQPSTPAVIQSLYLFILGAGIGLSMQVLILIVQNTSDFEDLGVATSGVRFFR HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHEEHHEEEECCCCCHHHHCCHHHHHHHHH TIGSSFGAAIFGSLFVNFLNRRIGPALAASGAPPGAVSSPGALHRQPHEVAAPIVAAYAE HHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH SLTEVFFWAAPVALVGFVLALFLREIPLRDIHDSTVDLGDAFGMPTTETPDQMLENAIAR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHCCCCCCCCHHHHHHHHHHH MLRGETGMRLRSIAMRPDCRLDVAGLWGVLRINRYTQMYGAARLTDMAEYLRIPFEVLEP HHCCCCCCHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH TFSRLVTAGYAGSDGDRLWLTPAGAQQVGYVHSLLLAWLVDKLGRSPGFEGRPDRQAVQA HHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH ALERVAYRVLAQRDWHDEQPTAAITAAAR HHHHHHHHHHHHCCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]